| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hydE [H]
Identifier: 160875033
GI number: 160875033
Start: 2288536
End: 2290446
Strand: Reverse
Name: hydE [H]
Synonym: Sbal195_1918
Alternate gene names: 160875033
Gene position: 2290446-2288536 (Counterclockwise)
Preceding gene: 160875034
Following gene: 160875032
Centisome position: 42.83
GC content: 49.66
Gene sequence:
>1911_bases ATGAAAAACATCAGATTTGATTTTACCTGTTCACGTCAGGTGCCTTTGTACGCGCATTTATGTAATCAATACCTAAATTA CGATGCGCTGAACATCAGCATAGGCTGTGATGGCCAACAGGACTTTGGTCAGCACAGTTACTTTATAGAAGCCCAGGGCG AGCAGACTCAACTCGAGCAACTGGCCGATGCCATTGCCGCAGACTTTTTGATTTCCGCTTGGTTGATTGACTCCGGCATT AAGGTCATCGACGAGCCCCAAGGCGGCAAAACCTTACTGCCCTATTCACAATCTGGATCAAGTCCTGCCATCGCGCCTTT TTGCCAGCAATGTTATCCGCTTATTGGCGATAATCAGTCGGCGAAGTTTGGCGCGCTAGATTTAGCCTGCCCTTGCTGCA AGGGCGAAACACAATTAACGCCAGCGCAAAAAGCCTTAACCTTGTCAGATATAAAAGCCATGGCACAGGGGCTGCTGACA CAAGGCCCACTGACATTAGCGGCCGCCGATGAGCTGCAACTTAGTCTGACACCGTTTGCTCAGCCCTTAGGCGAGCGGCC ACAGCTGTTAATTTGTAATCCCAATACGCTAAACGCCCATTTCTGCCTGAACGATGCGCAGGTACTCGCGCTTTCCAGTA TTGAAAAGCCGCTTATCTGCGCCAGACCCACGCAAGAGCACGACAAACTCAGTGCGCCGCTGTACGACATTTGTTTTGCC TACAGCCGGGTGATTTTAGTACTCGCCGAAGTATTGCGGCAAAAAGGGATCGATTGGGTTTATATCCAAGGTAAGCATAA TAGGCCGAAACTCGCGTGGGTCGATGGCGCTTGGGCGCAAATTGCTAGCAAAGATTTAGGCTCAACGCAGGCTCAAACCA AGCACTTTATCGCCCCAGAACCCTTAAGGGAAAAAGTCAGCCTTCACGGTTATCAAGCCCAATGGCAAGCAGCGAAACGG TCACGTTCCCATCAAGGCGAACTGAGTGTGGCGGTATTAGCTCAATCGAGTGAAGCGACTCACACTGCTAACACCTTTGC CGCTAATACAGGTGCCGCTAATGGTGAAATTGAGCATGCTGGCACGCCACACGCTAGCGATACCGAAAATCATACCATCG CGGACGCAGCGTTATTCAGTGCCTTACTTAACGGAAAATTTACCAGCCACAGACAAGCAAAAAATGCCGCGGTCATTTAC TTAAGCCATACCCACGCCAGTCAAATTGTCACCTGCGATAATAAGGGCGACACAGAACTCTTCTTTGCACTGCCCGAGCT GCCCGATAACGGTTACGAAATCTTCCATCAACTGGACAGCAGTCCACAAAAAGCCGTGGCACAGAAGTTTAAAAGCCTGT TCCCCGACGATTACCTAAAACTCCTGAGCCTAAAGCTTCACGGCAGACGGGACAACTTGCAAAGTCTGTGGGCCATTGCC GCCATTTTAATTGGCCTCAATCCCCAAGAAGAAACGCAAAGCCAAGAAAAACTCAGCGATGCACTCGTAGCCGCCGCCAT GCGTTACCACGGTGCCAATGCCCCGCGTATCGATTATCCCCTGACCAAAGGTGAAGCCCACCGCAGCCTAAATTGGTGTA AAACCTTAGGCACAGTCTTGAGTTTTCGTATCGCAGGTAATGACGACCCGAGTCAACTCGCCTTTGCGATGCAAGACTCG CTGGCGGACTATCTTTCTAACTGGTTAGAACATATCGATTTAAATATCGGCGTGCACAATGTTGCCTTAGCGGGCAATGA ATTAACGAATGAAACCCTGTGTAAACGCATCAGTTTACGCTTAGGAAAGAACTTCCCCTTAGTGATCAATCGTAGTCTAG ATTTAGACGGCGATAACTTAGCCGTTGGCGCACTTTACGTTAAGCAGCGCCAACTGAATGCCCATGATTAG
Upstream 100 bases:
>100_bases CCTTGGGTTCACTGCGACGCGTATTGCCGATCACAGTATCGACTCGCTGATCCCTGACTCTTATAAACGCGGCGTTACTA CTGGTGAAAGTATATAGAAA
Downstream 100 bases:
>100_bases GAGGCCAAAAGTTAAGTCACAACGCATGCAGCCACATAGACATAATAGTCGCCACAAAAAACACAGTGATCTGCAGATAA AGCGCAGGCTGGCATTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQLADAIAADFLISAWLIDSGI KVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQSAKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLT QGPLTLAAADELQLSLTPFAQPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPEPLREKVSLHGYQAQWQAAKR SRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHAGTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIY LSHTHASQIVTCDNKGDTELFFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVLSFRIAGNDDPSQLAFAMQDS LADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLRLGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD
Sequences:
>Translated_636_residues MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQLADAIAADFLISAWLIDSGI KVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQSAKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLT QGPLTLAAADELQLSLTPFAQPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPEPLREKVSLHGYQAQWQAAKR SRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHAGTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIY LSHTHASQIVTCDNKGDTELFFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVLSFRIAGNDDPSQLAFAMQDS LADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLRLGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD >Mature_636_residues MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQLADAIAADFLISAWLIDSGI KVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQSAKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLT QGPLTLAAADELQLSLTPFAQPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPEPLREKVSLHGYQAQWQAAKR SRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHAGTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIY LSHTHASQIVTCDNKGDTELFFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVLSFRIAGNDDPSQLAFAMQDS LADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLRLGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69638; Mature: 69638
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQ CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHH LADAIAADFLISAWLIDSGIKVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQS HHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCC AKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLTQGPLTLAAADELQLSLTPFA CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECHHH QPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA HCCCCCCCEEEECCCCCEEEEEECCCCEEEEHHCCCCEEECCCCCCHHHHCCCHHHHHHH YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPE HHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHCCCCHHHHHCCCCCC PLREKVSLHGYQAQWQAAKRSRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHA CHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHEECCCCCCCCCCCCC GTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIYLSHTHASQIVTCDNKGDTEL CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEE FFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SFRIAGNDDPSQLAFAMQDSLADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLR EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH LGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD HCCCCCEEEECCCCCCCCCEEEEEEEEEHHCCCCCC >Mature Secondary Structure MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQ CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHH LADAIAADFLISAWLIDSGIKVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQS HHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCC AKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLTQGPLTLAAADELQLSLTPFA CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECHHH QPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA HCCCCCCCEEEECCCCCEEEEEECCCCEEEEHHCCCCEEECCCCCCHHHHCCCHHHHHHH YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPE HHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHCCCCHHHHHCCCCCC PLREKVSLHGYQAQWQAAKRSRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHA CHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHEECCCCCCCCCCCCC GTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIYLSHTHASQIVTCDNKGDTEL CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEE FFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SFRIAGNDDPSQLAFAMQDSLADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLR EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH LGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD HCCCCCEEEECCCCCCCCCEEEEEEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9639603; 14500908; 1587288 [H]