Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is hydE [H]

Identifier: 160875033

GI number: 160875033

Start: 2288536

End: 2290446

Strand: Reverse

Name: hydE [H]

Synonym: Sbal195_1918

Alternate gene names: 160875033

Gene position: 2290446-2288536 (Counterclockwise)

Preceding gene: 160875034

Following gene: 160875032

Centisome position: 42.83

GC content: 49.66

Gene sequence:

>1911_bases
ATGAAAAACATCAGATTTGATTTTACCTGTTCACGTCAGGTGCCTTTGTACGCGCATTTATGTAATCAATACCTAAATTA
CGATGCGCTGAACATCAGCATAGGCTGTGATGGCCAACAGGACTTTGGTCAGCACAGTTACTTTATAGAAGCCCAGGGCG
AGCAGACTCAACTCGAGCAACTGGCCGATGCCATTGCCGCAGACTTTTTGATTTCCGCTTGGTTGATTGACTCCGGCATT
AAGGTCATCGACGAGCCCCAAGGCGGCAAAACCTTACTGCCCTATTCACAATCTGGATCAAGTCCTGCCATCGCGCCTTT
TTGCCAGCAATGTTATCCGCTTATTGGCGATAATCAGTCGGCGAAGTTTGGCGCGCTAGATTTAGCCTGCCCTTGCTGCA
AGGGCGAAACACAATTAACGCCAGCGCAAAAAGCCTTAACCTTGTCAGATATAAAAGCCATGGCACAGGGGCTGCTGACA
CAAGGCCCACTGACATTAGCGGCCGCCGATGAGCTGCAACTTAGTCTGACACCGTTTGCTCAGCCCTTAGGCGAGCGGCC
ACAGCTGTTAATTTGTAATCCCAATACGCTAAACGCCCATTTCTGCCTGAACGATGCGCAGGTACTCGCGCTTTCCAGTA
TTGAAAAGCCGCTTATCTGCGCCAGACCCACGCAAGAGCACGACAAACTCAGTGCGCCGCTGTACGACATTTGTTTTGCC
TACAGCCGGGTGATTTTAGTACTCGCCGAAGTATTGCGGCAAAAAGGGATCGATTGGGTTTATATCCAAGGTAAGCATAA
TAGGCCGAAACTCGCGTGGGTCGATGGCGCTTGGGCGCAAATTGCTAGCAAAGATTTAGGCTCAACGCAGGCTCAAACCA
AGCACTTTATCGCCCCAGAACCCTTAAGGGAAAAAGTCAGCCTTCACGGTTATCAAGCCCAATGGCAAGCAGCGAAACGG
TCACGTTCCCATCAAGGCGAACTGAGTGTGGCGGTATTAGCTCAATCGAGTGAAGCGACTCACACTGCTAACACCTTTGC
CGCTAATACAGGTGCCGCTAATGGTGAAATTGAGCATGCTGGCACGCCACACGCTAGCGATACCGAAAATCATACCATCG
CGGACGCAGCGTTATTCAGTGCCTTACTTAACGGAAAATTTACCAGCCACAGACAAGCAAAAAATGCCGCGGTCATTTAC
TTAAGCCATACCCACGCCAGTCAAATTGTCACCTGCGATAATAAGGGCGACACAGAACTCTTCTTTGCACTGCCCGAGCT
GCCCGATAACGGTTACGAAATCTTCCATCAACTGGACAGCAGTCCACAAAAAGCCGTGGCACAGAAGTTTAAAAGCCTGT
TCCCCGACGATTACCTAAAACTCCTGAGCCTAAAGCTTCACGGCAGACGGGACAACTTGCAAAGTCTGTGGGCCATTGCC
GCCATTTTAATTGGCCTCAATCCCCAAGAAGAAACGCAAAGCCAAGAAAAACTCAGCGATGCACTCGTAGCCGCCGCCAT
GCGTTACCACGGTGCCAATGCCCCGCGTATCGATTATCCCCTGACCAAAGGTGAAGCCCACCGCAGCCTAAATTGGTGTA
AAACCTTAGGCACAGTCTTGAGTTTTCGTATCGCAGGTAATGACGACCCGAGTCAACTCGCCTTTGCGATGCAAGACTCG
CTGGCGGACTATCTTTCTAACTGGTTAGAACATATCGATTTAAATATCGGCGTGCACAATGTTGCCTTAGCGGGCAATGA
ATTAACGAATGAAACCCTGTGTAAACGCATCAGTTTACGCTTAGGAAAGAACTTCCCCTTAGTGATCAATCGTAGTCTAG
ATTTAGACGGCGATAACTTAGCCGTTGGCGCACTTTACGTTAAGCAGCGCCAACTGAATGCCCATGATTAG

Upstream 100 bases:

>100_bases
CCTTGGGTTCACTGCGACGCGTATTGCCGATCACAGTATCGACTCGCTGATCCCTGACTCTTATAAACGCGGCGTTACTA
CTGGTGAAAGTATATAGAAA

Downstream 100 bases:

>100_bases
GAGGCCAAAAGTTAAGTCACAACGCATGCAGCCACATAGACATAATAGTCGCCACAAAAAACACAGTGATCTGCAGATAA
AGCGCAGGCTGGCATTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQLADAIAADFLISAWLIDSGI
KVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQSAKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLT
QGPLTLAAADELQLSLTPFAQPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA
YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPEPLREKVSLHGYQAQWQAAKR
SRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHAGTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIY
LSHTHASQIVTCDNKGDTELFFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA
AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVLSFRIAGNDDPSQLAFAMQDS
LADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLRLGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD

Sequences:

>Translated_636_residues
MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQLADAIAADFLISAWLIDSGI
KVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQSAKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLT
QGPLTLAAADELQLSLTPFAQPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA
YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPEPLREKVSLHGYQAQWQAAKR
SRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHAGTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIY
LSHTHASQIVTCDNKGDTELFFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA
AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVLSFRIAGNDDPSQLAFAMQDS
LADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLRLGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD
>Mature_636_residues
MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQLADAIAADFLISAWLIDSGI
KVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQSAKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLT
QGPLTLAAADELQLSLTPFAQPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA
YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPEPLREKVSLHGYQAQWQAAKR
SRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHAGTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIY
LSHTHASQIVTCDNKGDTELFFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA
AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVLSFRIAGNDDPSQLAFAMQDS
LADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLRLGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69638; Mature: 69638

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQ
CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHH
LADAIAADFLISAWLIDSGIKVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQS
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
AKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLTQGPLTLAAADELQLSLTPFA
CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECHHH
QPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA
HCCCCCCCEEEECCCCCEEEEEECCCCEEEEHHCCCCEEECCCCCCHHHHCCCHHHHHHH
YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPE
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHCCCCHHHHHCCCCCC
PLREKVSLHGYQAQWQAAKRSRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHA
CHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHEECCCCCCCCCCCCC
GTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIYLSHTHASQIVTCDNKGDTEL
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEE
FFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH
AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SFRIAGNDDPSQLAFAMQDSLADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
LGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD
HCCCCCEEEECCCCCCCCCEEEEEEEEEHHCCCCCC
>Mature Secondary Structure
MKNIRFDFTCSRQVPLYAHLCNQYLNYDALNISIGCDGQQDFGQHSYFIEAQGEQTQLEQ
CCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHH
LADAIAADFLISAWLIDSGIKVIDEPQGGKTLLPYSQSGSSPAIAPFCQQCYPLIGDNQS
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
AKFGALDLACPCCKGETQLTPAQKALTLSDIKAMAQGLLTQGPLTLAAADELQLSLTPFA
CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECHHH
QPLGERPQLLICNPNTLNAHFCLNDAQVLALSSIEKPLICARPTQEHDKLSAPLYDICFA
HCCCCCCCEEEECCCCCEEEEEECCCCEEEEHHCCCCEEECCCCCCHHHHCCCHHHHHHH
YSRVILVLAEVLRQKGIDWVYIQGKHNRPKLAWVDGAWAQIASKDLGSTQAQTKHFIAPE
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHHHHHCCCCHHHHHCCCCCC
PLREKVSLHGYQAQWQAAKRSRSHQGELSVAVLAQSSEATHTANTFAANTGAANGEIEHA
CHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHEECCCCCCCCCCCCC
GTPHASDTENHTIADAALFSALLNGKFTSHRQAKNAAVIYLSHTHASQIVTCDNKGDTEL
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCEE
FFALPELPDNGYEIFHQLDSSPQKAVAQKFKSLFPDDYLKLLSLKLHGRRDNLQSLWAIA
EEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHH
AILIGLNPQEETQSQEKLSDALVAAAMRYHGANAPRIDYPLTKGEAHRSLNWCKTLGTVL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SFRIAGNDDPSQLAFAMQDSLADYLSNWLEHIDLNIGVHNVALAGNELTNETLCKRISLR
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH
LGKNFPLVINRSLDLDGDNLAVGALYVKQRQLNAHD
HCCCCCEEEECCCCCCCCCEEEEEEEEEHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9639603; 14500908; 1587288 [H]