Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874981

Identifier: 160874981

GI number: 160874981

Start: 2230208

End: 2230966

Strand: Reverse

Name: 160874981

Synonym: Sbal195_1866

Alternate gene names: NA

Gene position: 2230966-2230208 (Counterclockwise)

Preceding gene: 160874982

Following gene: 160874980

Centisome position: 41.72

GC content: 44.4

Gene sequence:

>759_bases
ATGAACACTAGTCTCATTGAGATTACCGTCGCCGAAATTAAAGAGTTGGCGGACGTAGAGCCAAAACAAGCGAGCAAACG
CTTTGAAATCATTGCAAATACCATGAGCGACGAGCAATTAGTCGAAGTCATCGAACACATGGATATCGTCACGCTGACGC
AAATCAACAGTCACCATGATATCTCTTGTCCTTCGATCATGTCTGAACTCATGACCCCAGAACAAATTCGCGACATCGTC
TGTCAGCAACCTTTGTACTGGGAAGAAAAAATTAAAAACAATGCCGAAGAACTTATTCAGCATACCTTTGATTTTTTGAC
CTATTTAATTCGCATCCAAGATAGCGAAGAAAAGCAAACTGCGATTCTAGAATGTATCGCCGAAGATCCAGCGGGCCTCT
TCTATCTGTCGATCCCTTTCATCGAAATGATGTTAGGCGAAAAACATGAAGATGAAGACGGCTACACAGATCTCTATGAT
GACGAAGAAGACACTGAAACCATCGGCTACGACAGCCGCGTCGCCAGTGAAGATGCACACAGCCTCAGCATAGACGACCC
ACGCAGCCTAATGGCCTTAATCCACGAGCTCGCGCCCGATGTTGAAAAAGCCATTAAGAGTCTGCTGCGTAACGAAAGCT
CAGGTTGGGAAATGATCATCAGCAAGTTTGTCAACGAGCTGGTTATTCAAGCCAAAGAGAAAAACCAAGTGACGGATGAA
TACGCTGAAGTCGATGATATGTTTAGCTTTTTGGATTAA

Upstream 100 bases:

>100_bases
ATGATGACAACGATTATGTTGGCACCTCAGATAACGACGACGATGATGAAGGCGAAGAGGAAGATGGCTACTACGATCAC
TACGATGATGAGGACCGCTA

Downstream 100 bases:

>100_bases
GGAATTATTTGATGCAACTGGTACTGCGTGATGTAGATCAAGGACCCTACCTAAGCAAGGTATTGATCCAAGGCCAAGCA
GACGAAACGCTGAGCGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHDISCPSIMSELMTPEQIRDIV
CQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQTAILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYD
DEEDTETIGYDSRVASEDAHSLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE
YAEVDDMFSFLD

Sequences:

>Translated_252_residues
MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHDISCPSIMSELMTPEQIRDIV
CQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQTAILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYD
DEEDTETIGYDSRVASEDAHSLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE
YAEVDDMFSFLD
>Mature_252_residues
MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHDISCPSIMSELMTPEQIRDIV
CQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQTAILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYD
DEEDTETIGYDSRVASEDAHSLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE
YAEVDDMFSFLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28958; Mature: 28958

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHD
CCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCCCC
ISCPSIMSELMTPEQIRDIVCQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQT
CCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH
AILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYDDEEDTETIGYDSRVASEDAH
HHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCC
SLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YAEVDDMFSFLD
HHHHHHHHHHCC
>Mature Secondary Structure
MNTSLIEITVAEIKELADVEPKQASKRFEIIANTMSDEQLVEVIEHMDIVTLTQINSHHD
CCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHEEECCCCCC
ISCPSIMSELMTPEQIRDIVCQQPLYWEEKIKNNAEELIQHTFDFLTYLIRIQDSEEKQT
CCCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH
AILECIAEDPAGLFYLSIPFIEMMLGEKHEDEDGYTDLYDDEEDTETIGYDSRVASEDAH
HHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCC
SLSIDDPRSLMALIHELAPDVEKAIKSLLRNESSGWEMIISKFVNELVIQAKEKNQVTDE
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YAEVDDMFSFLD
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA