| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874972
Identifier: 160874972
GI number: 160874972
Start: 2219458
End: 2219973
Strand: Direct
Name: 160874972
Synonym: Sbal195_1857
Alternate gene names: NA
Gene position: 2219458-2219973 (Clockwise)
Preceding gene: 160874971
Following gene: 160874973
Centisome position: 41.51
GC content: 48.64
Gene sequence:
>516_bases ATGGGAAATGTGATGGGAAAACTGGCGGCTTCACATAAATGGGCGCTGGGCATAGTACTTTTTACGACCGTTGCGATTCT TGCTGGCGTGAATTGGCGCATTTTCAAATTCGAACAACTGCTTAATCACGGCCAAGTCGTGCGCTTTGCATTAGCGCCAG TCGATCCGCGCTCGTTAATGCAGGGGGATTACATGGCGCTGGAATATGCCATTGCCCGCGATGTGCGTAGCGCCTTAGCG CCGCAACAAATGCAGGGTCAGTTGTTACTGGCACTAGATAAGCAAAAAGTGGCACGTTTTATGGATTTTTATACTGACCA AGCGCTGGGTAAAGATCAGCTGCGGGTGCAATTTCGTGTTCGTGGTAATCAAATCAAGCTCGCATCGAACAGCTTTTTCT TTGAAGAAGGGCAAGCCGATCATTTCAGTGCGGCTAAATACGGCGAGTTTAGGGTGAACGCCCAAGGTGAGTTACTGCTG GTCAGTTTACTCGATGAAAAACTTGAGCCCTTATAG
Upstream 100 bases:
>100_bases AATCTGCTTATTTGATGGGTTTAGGCGCGCTGTTGCTGGTGGCAAGGATGCTGATGTGGCGCTTATTTCCTGCCAATGAA AATGCCAAGGAGACTATGTG
Downstream 100 bases:
>100_bases CCCTGCGTCGGGGCTTTCATCCATTGGCTCTGCTTATCTCTGTTAAGAGCGATTTATCCCCATCACATTGATTATTTCTG GCCGCATTGTTAATGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MGNVMGKLAASHKWALGIVLFTTVAILAGVNWRIFKFEQLLNHGQVVRFALAPVDPRSLMQGDYMALEYAIARDVRSALA PQQMQGQLLLALDKQKVARFMDFYTDQALGKDQLRVQFRVRGNQIKLASNSFFFEEGQADHFSAAKYGEFRVNAQGELLL VSLLDEKLEPL
Sequences:
>Translated_171_residues MGNVMGKLAASHKWALGIVLFTTVAILAGVNWRIFKFEQLLNHGQVVRFALAPVDPRSLMQGDYMALEYAIARDVRSALA PQQMQGQLLLALDKQKVARFMDFYTDQALGKDQLRVQFRVRGNQIKLASNSFFFEEGQADHFSAAKYGEFRVNAQGELLL VSLLDEKLEPL >Mature_170_residues GNVMGKLAASHKWALGIVLFTTVAILAGVNWRIFKFEQLLNHGQVVRFALAPVDPRSLMQGDYMALEYAIARDVRSALAP QQMQGQLLLALDKQKVARFMDFYTDQALGKDQLRVQFRVRGNQIKLASNSFFFEEGQADHFSAAKYGEFRVNAQGELLLV SLLDEKLEPL
Specific function: Unknown
COG id: COG4929
COG function: function code S; Uncharacterized membrane-anchored protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19249; Mature: 19117
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVMGKLAASHKWALGIVLFTTVAILAGVNWRIFKFEQLLNHGQVVRFALAPVDPRSLM CCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCEEEEEECCCCHHHHH QGDYMALEYAIARDVRSALAPQQMQGQLLLALDKQKVARFMDFYTDQALGKDQLRVQFRV CCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEE RGNQIKLASNSFFFEEGQADHFSAAKYGEFRVNAQGELLLVSLLDEKLEPL ECCEEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHCCCC >Mature Secondary Structure GNVMGKLAASHKWALGIVLFTTVAILAGVNWRIFKFEQLLNHGQVVRFALAPVDPRSLM CCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCEEEEEECCCCHHHHH QGDYMALEYAIARDVRSALAPQQMQGQLLLALDKQKVARFMDFYTDQALGKDQLRVQFRV CCCHHHHHHHHHHHHHHHCCCHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEE RGNQIKLASNSFFFEEGQADHFSAAKYGEFRVNAQGELLLVSLLDEKLEPL ECCEEEEECCCEEEECCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA