| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874964
Identifier: 160874964
GI number: 160874964
Start: 2212723
End: 2213322
Strand: Direct
Name: 160874964
Synonym: Sbal195_1849
Alternate gene names: NA
Gene position: 2212723-2213322 (Clockwise)
Preceding gene: 160874963
Following gene: 160874965
Centisome position: 41.38
GC content: 45.17
Gene sequence:
>600_bases ATGCTGGACGTGATCGCTGATGCCTTGGTAGACAAAGGCTATATCTTTTTATCTGACTTAGTTCCCAACCATATTAGCCA AGTACTATTGGAAAAAATTCAATCGACGCAAGCACATGAGCTAAAAGCTGCGTCCATTGGTCGTGGCGCCGAGCAGCAAT TAAATCCCGATATTCGCCGCGACAGAATACAGTGGCTAGAAGAGCACAACGAGCCCGATGCCCAATATCTTGAGCTGATG ACGCAACTCAAAAATGGCTTGAATCGTCGCTTGTTTATGGGGTTATTCGACTATGAAAGCCACTATGCGGTATATCAGCC AGGGGCATTCTATAAGAAACATGTCGATGCGCTAAAAGGCAGTCAAAACCGCATCTTAACCACAGTGTTTTTCTTAAATC CTGACTGGAAAGCGGCAGATTGTGGCGAGTTGATTATCTATGATGAAGCTGACATTGAGATTGAACGCATCGCACCTAAA ATGGGCCATTTTGTGATTTTCCTCAGTGAGCGCTTTCCCCATGAAGTGACTAAAACTTTGGCCCAGCGTAATAGCATTGC GGGTTGGTTTAGGGTCAGTAACAGCGTGCATGGCTTTTAA
Upstream 100 bases:
>100_bases AAAATCAGGCTCACTTAATCCCTCCTTGAGCCCTTGAGTACAGCAAAAGCGTAGCCCTTTTATTGGATGTAGCATAATGG TTTCGCAATTAAGTGAAGCA
Downstream 100 bases:
>100_bases CTTTAGCTTTTAACTATGGTTTTTAACTTCGGTTCTAACTTTAGTTTTTAACTTCAACTGCTATCAAACACCTAAATGCC ACCCACAGGTTTAGGTGTTT
Product: prolyl 4-hydroxylase subunit alpha
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Alpha Subunit; Proline Hydroxylase; Oxidoreductase; SM-20 Domain-Containing Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; SM-20-Related Protein; 2OG-Fe(II) Oxygenase Superfamily Protein; SM-20-Like Protein; SM-20 Domain Protein; 2OG-Fe(II) Oxygenase Family Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; 2OG-Fe(II) Oxygenase Family; 2og-Fe(Ii) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit Homologue; Egl Nine-Like Protein
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLDVIADALVDKGYIFLSDLVPNHISQVLLEKIQSTQAHELKAASIGRGAEQQLNPDIRRDRIQWLEEHNEPDAQYLELM TQLKNGLNRRLFMGLFDYESHYAVYQPGAFYKKHVDALKGSQNRILTTVFFLNPDWKAADCGELIIYDEADIEIERIAPK MGHFVIFLSERFPHEVTKTLAQRNSIAGWFRVSNSVHGF
Sequences:
>Translated_199_residues MLDVIADALVDKGYIFLSDLVPNHISQVLLEKIQSTQAHELKAASIGRGAEQQLNPDIRRDRIQWLEEHNEPDAQYLELM TQLKNGLNRRLFMGLFDYESHYAVYQPGAFYKKHVDALKGSQNRILTTVFFLNPDWKAADCGELIIYDEADIEIERIAPK MGHFVIFLSERFPHEVTKTLAQRNSIAGWFRVSNSVHGF >Mature_199_residues MLDVIADALVDKGYIFLSDLVPNHISQVLLEKIQSTQAHELKAASIGRGAEQQLNPDIRRDRIQWLEEHNEPDAQYLELM TQLKNGLNRRLFMGLFDYESHYAVYQPGAFYKKHVDALKGSQNRILTTVFFLNPDWKAADCGELIIYDEADIEIERIAPK MGHFVIFLSERFPHEVTKTLAQRNSIAGWFRVSNSVHGF
Specific function: Unknown
COG id: COG3751
COG function: function code O; Predicted proline hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22889; Mature: 22889
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVIADALVDKGYIFLSDLVPNHISQVLLEKIQSTQAHELKAASIGRGAEQQLNPDIRR CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCHHHH DRIQWLEEHNEPDAQYLELMTQLKNGLNRRLFMGLFDYESHYAVYQPGAFYKKHVDALKG HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCC SQNRILTTVFFLNPDWKAADCGELIIYDEADIEIERIAPKMGHFVIFLSERFPHEVTKTL CCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHH AQRNSIAGWFRVSNSVHGF HHHCCCCCEEEECCCCCCC >Mature Secondary Structure MLDVIADALVDKGYIFLSDLVPNHISQVLLEKIQSTQAHELKAASIGRGAEQQLNPDIRR CHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCHHHH DRIQWLEEHNEPDAQYLELMTQLKNGLNRRLFMGLFDYESHYAVYQPGAFYKKHVDALKG HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCC SQNRILTTVFFLNPDWKAADCGELIIYDEADIEIERIAPKMGHFVIFLSERFPHEVTKTL CCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHH AQRNSIAGWFRVSNSVHGF HHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA