| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874961
Identifier: 160874961
GI number: 160874961
Start: 2210647
End: 2211240
Strand: Direct
Name: 160874961
Synonym: Sbal195_1846
Alternate gene names: NA
Gene position: 2210647-2211240 (Clockwise)
Preceding gene: 160874960
Following gene: 160874962
Centisome position: 41.34
GC content: 49.33
Gene sequence:
>594_bases ATGCCACTTGCATCCCTTTACCAAAAATTGCTCAATATGAGTCGCTATTTCGATGGCGTAGCGCCATTAGCCCTCAGGAT TTACCTTGCGCCCGTGTTGATGCAAGCGGGTTATAACAAGCTCGCCCACTTTGACGATACGGTTGCTTGGTTTGCCAATC CCGATTGGGGTTTAGGCCTGCCAATGCCGGCGGTAATGGCAGGATTGGCAGCGGGAACCGAGTTCTTTGGCGCTATCTTA TTACTGCTTGGGCTTGCGACTCGGCTGATATCTATCCCTTTGATGGTCACTATGTTGGTCGCCGCATTTACCGTGCATTG GCCAAATGGCTGGTTAGCGATAGCCGATGGCAGTTCTTGGCTAGCCAACGACAGAGTACTTGAAGCAGGGGATAAACTGG CGAAAGCCAAAGAGTTATTGCAGGAGCACGGTAATTACGACTGGCTGACCAGCTCAGGTAACTTAGCTGTGCTTAATAAT GGGATAGAGTTTGCGGCAACTTATTTCATTATGTTGTTGGCACTCTTTACCTTAGGCGCCGGTCGTTACACTAGCCTAGA TTATTTTATCGCTAAGCGCTGCGGGGTTAAGTAA
Upstream 100 bases:
>100_bases GAAAAAGAGGCGAGTGCAAAAAAAGCCTAGGCCATGAAAGATTTATTGGCTTGCTAGGGTCTATTCCTGCAAGCCAATAA ATTAGTCAAAGAGAAACACT
Downstream 100 bases:
>100_bases GCCTTTTATAAAGTGCTCTTGATTTTCAATAGCAATCAAAGCGTTAAATCCCACCCATGCGGTGGGATTTTTTTATGCCT CTTTGCCAGCAATTTGCTAT
Product: DoxX family protein
Products: NA
Alternate protein names: DoxX Subfamily; DoxD-Like Family Protein; DoxX Protein
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGLPMPAVMAGLAAGTEFFGAIL LLLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSWLANDRVLEAGDKLAKAKELLQEHGNYDWLTSSGNLAVLNN GIEFAATYFIMLLALFTLGAGRYTSLDYFIAKRCGVK
Sequences:
>Translated_197_residues MPLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGLPMPAVMAGLAAGTEFFGAIL LLLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSWLANDRVLEAGDKLAKAKELLQEHGNYDWLTSSGNLAVLNN GIEFAATYFIMLLALFTLGAGRYTSLDYFIAKRCGVK >Mature_196_residues PLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGLPMPAVMAGLAAGTEFFGAILL LLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSWLANDRVLEAGDKLAKAKELLQEHGNYDWLTSSGNLAVLNNG IEFAATYFIMLLALFTLGAGRYTSLDYFIAKRCGVK
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21491; Mature: 21360
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGL CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCC PMPAVMAGLAAGTEFFGAILLLLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCH LANDRVLEAGDKLAKAKELLQEHGNYDWLTSSGNLAVLNNGIEFAATYFIMLLALFTLGA HHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCC GRYTSLDYFIAKRCGVK CCCHHHHHHHHHHCCCC >Mature Secondary Structure PLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCC PMPAVMAGLAAGTEFFGAILLLLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCH LANDRVLEAGDKLAKAKELLQEHGNYDWLTSSGNLAVLNNGIEFAATYFIMLLALFTLGA HHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCC GRYTSLDYFIAKRCGVK CCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA