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The map label for this gene is tsgA [H]

Identifier: 160874954

GI number: 160874954

Start: 2202780

End: 2203955

Strand: Direct

Name: tsgA [H]

Synonym: Sbal195_1839

Alternate gene names: 160874954

Gene position: 2202780-2203955 (Clockwise)

Preceding gene: 160874953

Following gene: 160874956

Centisome position: 41.19

GC content: 38.44

Gene sequence:

>1176_bases
ATGAATAATAAAATTACTTTAACAGCCATCAGTTTTCTCGCCAATTTTATTATGGCGGGCTTTGCGACCCAATTTGGAAT
GTTGATTGAACCCATAGCTGAGAAATTTGCTGCTAATGTTAACGAAGTTGCATCAATCTTTTCATTGCTCAATGGTGGTG
CACTCGCGGGGACGATTGCAGCATTTTTCTTTATTGAAAAAATGGGTATCAAAAGAATGACCTTGATAAGTTACAGTCTG
GTTGCTCTTTCTGCTCTGGCTTTACATCTAACCAATTCCCTACAAGTTGTGATGGTGGCAATGACCTTGATTGGTTTTTG
TGGCGGTATCGGTCTATGTATTGCTGGTACGATTGTGGTGTCTGTGTGGCAAGAGAAATTACAAAGCACAATGTTAGTAG
TGCAGGATGCGACTTTTAATATTGCAGGTGTTATTTTTCCATTGATAACAACTTATGCATTAACAAGCTCACTATCATGG
AGTTATAGCTATTTAGCTGTAGGTTTGGTCGCGTTAGGTACCGTCATTATTACATTATTCACTAATTTTTCTATATGTGA
GCAGTCTTCTTCAACAGAAGATAAGCAACAATCTGAGTGGAATCTTGGAATTATTAGCGGGGGTATTGGATTATTTTTAG
GGATGCTCGCATTATATACATTTTTAACTTGGGCACCTTTATTTGTAAAACAAAAATTTGATATTCCGTTTGAAGAGGCG
GGTAATATTATTACCCAGTATTGGTCCGCTGCGCTAATTGGTGCCCTAATTTCGACTGTGATTGTGACTCGTGTAAAAAT
TCACCATTTCTTAGTTGGTATTATTGCTTTAGCTATGGTGATCACCGCTGCCATTGTCAGTACCAATAATCTTAATTGGA
TAGCTTATTTAACCTATGGTTACGGTTTTGTGTGTGCCGCGCTTTATAATGCATTTATTGCTTATGGCGTGTCTTTTGTA
AAAAAAGCCAGCAGCAAAAATGTGTCATATATTCTTATTAGCGGAAGCGCAGGGGCGATGTTTAGCCCAGCCATCAGTTC
TTTCTTTGAACGTATTATCGGATTACAAACAGTGATGTATGTGATACCTCTGCTTTACGCAGCGATATTTATGCTATTGA
TCGTTTCAAGTCGGATGAAATCGGCTATGGAACAACACTCGCCATCGGTAAGTTAA

Upstream 100 bases:

>100_bases
TCTCTTTTAATAATATGATCGAGCTCGCGTTAGAAACCGCCCTCAATTAGGTTTAAAGCCATCCTTTGAACCCTTAGCAT
TTCACTTATGGAATGACATA

Downstream 100 bases:

>100_bases
TTTACCTGTGCATGCATCCCACACTCGGTTGTTAAATTAAGTCGAGTGTGGGTTATGCTGAAAGCGATTATATGCCTGCT
TCAACAAATTTCTTGAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MNNKITLTAISFLANFIMAGFATQFGMLIEPIAEKFAANVNEVASIFSLLNGGALAGTIAAFFFIEKMGIKRMTLISYSL
VALSALALHLTNSLQVVMVAMTLIGFCGGIGLCIAGTIVVSVWQEKLQSTMLVVQDATFNIAGVIFPLITTYALTSSLSW
SYSYLAVGLVALGTVIITLFTNFSICEQSSSTEDKQQSEWNLGIISGGIGLFLGMLALYTFLTWAPLFVKQKFDIPFEEA
GNIITQYWSAALIGALISTVIVTRVKIHHFLVGIIALAMVITAAIVSTNNLNWIAYLTYGYGFVCAALYNAFIAYGVSFV
KKASSKNVSYILISGSAGAMFSPAISSFFERIIGLQTVMYVIPLLYAAIFMLLIVSSRMKSAMEQHSPSVS

Sequences:

>Translated_391_residues
MNNKITLTAISFLANFIMAGFATQFGMLIEPIAEKFAANVNEVASIFSLLNGGALAGTIAAFFFIEKMGIKRMTLISYSL
VALSALALHLTNSLQVVMVAMTLIGFCGGIGLCIAGTIVVSVWQEKLQSTMLVVQDATFNIAGVIFPLITTYALTSSLSW
SYSYLAVGLVALGTVIITLFTNFSICEQSSSTEDKQQSEWNLGIISGGIGLFLGMLALYTFLTWAPLFVKQKFDIPFEEA
GNIITQYWSAALIGALISTVIVTRVKIHHFLVGIIALAMVITAAIVSTNNLNWIAYLTYGYGFVCAALYNAFIAYGVSFV
KKASSKNVSYILISGSAGAMFSPAISSFFERIIGLQTVMYVIPLLYAAIFMLLIVSSRMKSAMEQHSPSVS
>Mature_391_residues
MNNKITLTAISFLANFIMAGFATQFGMLIEPIAEKFAANVNEVASIFSLLNGGALAGTIAAFFFIEKMGIKRMTLISYSL
VALSALALHLTNSLQVVMVAMTLIGFCGGIGLCIAGTIVVSVWQEKLQSTMLVVQDATFNIAGVIFPLITTYALTSSLSW
SYSYLAVGLVALGTVIITLFTNFSICEQSSSTEDKQQSEWNLGIISGGIGLFLGMLALYTFLTWAPLFVKQKFDIPFEEA
GNIITQYWSAALIGALISTVIVTRVKIHHFLVGIIALAMVITAAIVSTNNLNWIAYLTYGYGFVCAALYNAFIAYGVSFV
KKASSKNVSYILISGSAGAMFSPAISSFFERIIGLQTVMYVIPLLYAAIFMLLIVSSRMKSAMEQHSPSVS

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TsgA family [H]

Homologues:

Organism=Escherichia coli, GI1789764, Length=392, Percent_Identity=23.469387755102, Blast_Score=127, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42146; Mature: 42146

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKITLTAISFLANFIMAGFATQFGMLIEPIAEKFAANVNEVASIFSLLNGGALAGTIA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH
AFFFIEKMGIKRMTLISYSLVALSALALHLTNSLQVVMVAMTLIGFCGGIGLCIAGTIVV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVWQEKLQSTMLVVQDATFNIAGVIFPLITTYALTSSLSWSYSYLAVGLVALGTVIITLF
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TNFSICEQSSSTEDKQQSEWNLGIISGGIGLFLGMLALYTFLTWAPLFVKQKFDIPFEEA
HCHHHHCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GNIITQYWSAALIGALISTVIVTRVKIHHFLVGIIALAMVITAAIVSTNNLNWIAYLTYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH
YGFVCAALYNAFIAYGVSFVKKASSKNVSYILISGSAGAMFSPAISSFFERIIGLQTVMY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VIPLLYAAIFMLLIVSSRMKSAMEQHSPSVS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNNKITLTAISFLANFIMAGFATQFGMLIEPIAEKFAANVNEVASIFSLLNGGALAGTIA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH
AFFFIEKMGIKRMTLISYSLVALSALALHLTNSLQVVMVAMTLIGFCGGIGLCIAGTIVV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVWQEKLQSTMLVVQDATFNIAGVIFPLITTYALTSSLSWSYSYLAVGLVALGTVIITLF
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TNFSICEQSSSTEDKQQSEWNLGIISGGIGLFLGMLALYTFLTWAPLFVKQKFDIPFEEA
HCHHHHCCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GNIITQYWSAALIGALISTVIVTRVKIHHFLVGIIALAMVITAAIVSTNNLNWIAYLTYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH
YGFVCAALYNAFIAYGVSFVKKASSKNVSYILISGSAGAMFSPAISSFFERIIGLQTVMY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
VIPLLYAAIFMLLIVSSRMKSAMEQHSPSVS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA