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The map label for this gene is speA [H]

Identifier: 160874920

GI number: 160874920

Start: 2166402

End: 2168315

Strand: Direct

Name: speA [H]

Synonym: Sbal195_1805

Alternate gene names: 160874920

Gene position: 2166402-2168315 (Clockwise)

Preceding gene: 160874919

Following gene: 160874921

Centisome position: 40.51

GC content: 45.72

Gene sequence:

>1914_bases
ATGAATGATTGGTCTATTGATGATGCTCGTGCTGGGTACAATGTTACTCACTGGAGCCAAGGTTTTTATGGGATCAGCGA
TCACGGTGAGGTGACAGTGTCACCAGACCCAAAAAATCCTGATTACAAGATTGGCTTAAATGAGCTAGCCAAAGACATGG
TTAAAGCGGGCGTCGCTTTACCTGTACTAGTTCGTTTTCCGCAGATCCTGCACCACAGAGTGAACAGTTTGTGCCAAGCA
TTCGACCAAGCGATACAGAAGTACGAGTATCAGGCGGACTATTTGCTGGTTTACCCCATTAAAGTAAACCAACAGCAAAC
TGTGGTGGAAGAGATCCTGGCGAGTCAGGCATCAAAAGAAGTACCACAACTGGGTTTAGAAGCAGGCAGTAAGCCTGAGC
TGATGGCTGTGTTAGCCATGGCGCAAAAAGCCAGTTCAGTCATTGTGTGTAATGGTTATAAAGATAATGAATATATCCGT
TTAGCATTGATTGGTGAAAAGTTAGGCCACAAGGTTTACATCGTTTTAGAAAAACTGTCTGAACTGAAAATGGTGTTAGC
GGAATCTAAGCGTCTTGGTGTGACACCGCGTTTAGGTCTGCGTGCGCGTTTAGCGTTCCAAGGCAAAGGCAAATGGCAGG
CGAGCGGCGGTGAGAAGTCTAAGTTCGGTCTATCTGCTGCACAAATTTTGCTAGTTGTTGAACAACTTAAGCAAAACGAT
ATGCTAGATTCGCTGCAATTGCTGCATTTCCACTTAGGTTCGCAAATCGCTAACATTCGTGATATTCGCCAAGGTGTGAG
TGAAGCGGGTCGTTTCTATTGTGAATTACGTGCATTAGGCGCAAGCGTTAACTGCTTCGACGTCGGTGGTGGTTTAGCGG
TGGATTACGATGGCACACGTAGCCAAAGTAATAACTCGATGAACTATGGCCTGACCGAATACGCCAACAATATCGTTAAC
GTATTGACCGACATCTGTAATGAATACGAGCAGCCTATGCCACGTATTATTTCAGAGTCTGGCCGTTACTTAACCGCGCA
CCATGCTGTGCTGATTACCGATGTTATCGGTACTGAAGCTTATCAGCCTGAAGATATTCAACCGCCAGCAGAAGAGTCAC
CACAGTTATTGCATAACATGTGGCATTCATGGTCTGAGCTTAGCGGCCGCGCCGATCAACGTGCCTTGATTGAGATTTAT
CACGATAGCCAAAGTGACTTACAAGAAGCGCATTCGCTATTCGCTTTAGGTCAATTGAGCTTGGCAGAACGTGCTTGGGC
TGAACAAGCTAACCTGCGTGTGTGCCATGAAGTGCAAGGGCTATTGAGTGCGAAGAACCGTTATCACAGACCTATCATTG
ATGAGCTCAATGAAAAGTTAGCCGATAAATTCTTTGTTAACTTCTCATTATTCCAGTCACTACCGGATGCTTGGGGTATT
GACCAAGTGTTCCCAGTATTGCCGTTGTCGGGTTTAGATAAAGCCCCTGAGCGCCGTGCTGTGATGCTTGATATCACCTG
TGACTCTGACGGTATTGTCGATCAATACGTTGATGGTCAAGGGATTGAAACCACATTGCCAGTACCAGCCTGGAGTGCGG
ATAGCCCGTATCTGATTGGTTTCTTCCTTGTGGGCGCATACCAAGAAATCTTGGGTGATATGCATAACCTGTTTGGTGAT
ACTAACTCTGCGGTTGTTCGCATCGAAGATAACGGTGTGACGAACATTGAATCGGTATTAGCGGGTGATACTGTCGCTGA
CGTATTGCGTTACGTTAACTTAGATGCAGTGGCCTTTATGCGCACTTACGAAGAGTTAGTGAATTTGCATATTGCCAAAG
ATGAACGCGCACAAATTCTAGAAGAATTGCAAGTCGGCCTGAAAGGCTACACTTACTTGGAAGATTTTTCTTAA

Upstream 100 bases:

>100_bases
GTCAGGTAAGGTGTCCCTTTGCCTGGGTTTGTCGAACGGGCGGTTGTGCTATTAAGCCATAACCGTTTAACCCATTTTTT
AATAGACGGGCTAAATAATA

Downstream 100 bases:

>100_bases
GATATTTTTCTTAAGATTTAGTGTGTTAAAATAAATCAGCCTAAGGTCACTTAGGCTGATTTTTGCTTTCTGGACGATAT
TTATTTATCGTCCGTGGGAG

Product: arginine decarboxylase

Products: NA

Alternate protein names: ADC [H]

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MNDWSIDDARAGYNVTHWSQGFYGISDHGEVTVSPDPKNPDYKIGLNELAKDMVKAGVALPVLVRFPQILHHRVNSLCQA
FDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKEVPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIR
LALIGEKLGHKVYIVLEKLSELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND
MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTRSQSNNSMNYGLTEYANNIVN
VLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEAYQPEDIQPPAEESPQLLHNMWHSWSELSGRADQRALIEIY
HDSQSDLQEAHSLFALGQLSLAERAWAEQANLRVCHEVQGLLSAKNRYHRPIIDELNEKLADKFFVNFSLFQSLPDAWGI
DQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWSADSPYLIGFFLVGAYQEILGDMHNLFGD
TNSAVVRIEDNGVTNIESVLAGDTVADVLRYVNLDAVAFMRTYEELVNLHIAKDERAQILEELQVGLKGYTYLEDFS

Sequences:

>Translated_637_residues
MNDWSIDDARAGYNVTHWSQGFYGISDHGEVTVSPDPKNPDYKIGLNELAKDMVKAGVALPVLVRFPQILHHRVNSLCQA
FDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKEVPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIR
LALIGEKLGHKVYIVLEKLSELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND
MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTRSQSNNSMNYGLTEYANNIVN
VLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEAYQPEDIQPPAEESPQLLHNMWHSWSELSGRADQRALIEIY
HDSQSDLQEAHSLFALGQLSLAERAWAEQANLRVCHEVQGLLSAKNRYHRPIIDELNEKLADKFFVNFSLFQSLPDAWGI
DQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWSADSPYLIGFFLVGAYQEILGDMHNLFGD
TNSAVVRIEDNGVTNIESVLAGDTVADVLRYVNLDAVAFMRTYEELVNLHIAKDERAQILEELQVGLKGYTYLEDFS
>Mature_637_residues
MNDWSIDDARAGYNVTHWSQGFYGISDHGEVTVSPDPKNPDYKIGLNELAKDMVKAGVALPVLVRFPQILHHRVNSLCQA
FDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKEVPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIR
LALIGEKLGHKVYIVLEKLSELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND
MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTRSQSNNSMNYGLTEYANNIVN
VLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEAYQPEDIQPPAEESPQLLHNMWHSWSELSGRADQRALIEIY
HDSQSDLQEAHSLFALGQLSLAERAWAEQANLRVCHEVQGLLSAKNRYHRPIIDELNEKLADKFFVNFSLFQSLPDAWGI
DQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWSADSPYLIGFFLVGAYQEILGDMHNLFGD
TNSAVVRIEDNGVTNIESVLAGDTVADVLRYVNLDAVAFMRTYEELVNLHIAKDERAQILEELQVGLKGYTYLEDFS

Specific function: Catalyzes the biosynthesis of agmatine from arginine [H]

COG id: COG1166

COG function: function code E; Arginine decarboxylase (spermidine biosynthesis)

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789307, Length=624, Percent_Identity=56.7307692307692, Blast_Score=731, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009006
- InterPro:   IPR002985
- InterPro:   IPR022643
- InterPro:   IPR022644
- InterPro:   IPR000183 [H]

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 70894; Mature: 70894

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDWSIDDARAGYNVTHWSQGFYGISDHGEVTVSPDPKNPDYKIGLNELAKDMVKAGVAL
CCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCEECHHHHHHHHHHCCCHH
PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS
HHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECHHHCCEEEHHHHHHH
ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND
HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCHHCHHHHHHHHHHHHHHHCC
MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCC
SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECHHEEEEHHHCCCC
YQPEDIQPPAEESPQLLHNMWHSWSELSGRADQRALIEIYHDSQSDLQEAHSLFALGQLS
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHEECCCHHHHHHHHHHHHHHHHH
LAERAWAEQANLRVCHEVQGLLSAKNRYHRPIIDELNEKLADKFFVNFSLFQSLPDAWGI
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
DQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWSADSPYLIG
HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCEECCCCCCCCCCCHHHH
FFLVGAYQEILGDMHNLFGDTNSAVVRIEDNGVTNIESVLAGDTVADVLRYVNLDAVAFM
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHCHHHHHHH
RTYEELVNLHIAKDERAQILEELQVGLKGYTYLEDFS
HHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNDWSIDDARAGYNVTHWSQGFYGISDHGEVTVSPDPKNPDYKIGLNELAKDMVKAGVAL
CCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCEECHHHHHHHHHHCCCHH
PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH
VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS
HHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECHHHCCEEEHHHHHHH
ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND
HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCHHCHHHHHHHHHHHHHHHCC
MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCC
SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECHHEEEEHHHCCCC
YQPEDIQPPAEESPQLLHNMWHSWSELSGRADQRALIEIYHDSQSDLQEAHSLFALGQLS
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHEECCCHHHHHHHHHHHHHHHHH
LAERAWAEQANLRVCHEVQGLLSAKNRYHRPIIDELNEKLADKFFVNFSLFQSLPDAWGI
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
DQVFPVLPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWSADSPYLIG
HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCCEECCCCCCCCCCCHHHH
FFLVGAYQEILGDMHNLFGDTNSAVVRIEDNGVTNIESVLAGDTVADVLRYVNLDAVAFM
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHCHHHHHHH
RTYEELVNLHIAKDERAQILEELQVGLKGYTYLEDFS
HHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA