Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 160874859

GI number: 160874859

Start: 2088816

End: 2090030

Strand: Direct

Name: yebA [C]

Synonym: Sbal195_1743

Alternate gene names: 160874859

Gene position: 2088816-2090030 (Clockwise)

Preceding gene: 160874858

Following gene: 160874861

Centisome position: 39.06

GC content: 49.14

Gene sequence:

>1215_bases
ATGTTGATTGTACGTATCAAAAGCTTAGTCATACTTGCTTCTCTTGCAGTTGGCTGTACATCTTCCTTTGCTGCATCTTC
ATTTAGACCTACGCCTGCGAAAGACTGCATACTCGCAAGTCCAATTCAAAGCTCGGCCTCTATTGGCGCATCAGTCAAGC
CTCCATTCCCGCCAGTTCAACTTGATATTAGCGTGCCAATCGAGCCGACGCTCTTTCCAAGTGGTGACTTTAACTATTTG
GTTTACGAGCTGCACTTTCAGAATTACACAGACGAATCATTAAAACTTCAGGAACTTGAGATAGTTGATGTAAGCCGCAC
CCCAAGTAGAGCTGTTGTAGCCTTCACTGGCTCACAACTTTATGAACGCTTGCTGCCGATCGGTGCCGATAAGATCGACG
ACGAACATCCTATTGATGGCGGAAAGAGAGCCGTGGCACTTATTTGCCTTGCTTTTGATAACGCTGTCACCATCCCAGAT
AAGTTAGGGCATCGTATGCTAGTGGGTGACTCTGTGGCTGAAGGCCCCATCATCGGAACTCGGCATACAAAACTGAATAC
GCTTGCTCCACCTGTGATGGGTAAGGACTGGGTCGCTGCCAATGGCCCGAGTCTTCATTCTCATCACAGAACTGGCCTAT
TCGTCGCTGGCGGCGTCGCGCATCTCTCTCGTCGTTTCGCAATTGATTGGAAGCAAAAAGACGAGCAAGGCGAAATGTAC
TATGGGGACGCGCGCGATGTTAGATCATACTATTCCTATGACGAGAAGGTTTTTGCGGTTGCAGATGCAACGGTAGTATC
TGCTCAAGACGGTCTTCCTGATAACATTCCTCGCACCGCTGCTGGATTCAATACCGCTGTATCGCTCACCATGGAAAACG
TCGCAGGCAACGCCGTCGTTCTTGATATTGGGGATGGACAGTACGCTTATTACGCGCACATGAAACCAGGCAGTATTCGC
GTAAAGGCGGGGGAGCACGTCAAACGTGGTGATTGGCTAGGTCAGATCGGTAACTCAGGCGATTCCCGCTGGCCACATCT
CCATTTTCAAGTTACTACCAGCCCAGATATTCTTGCCAGCGAAGGTTTGCCCTTTGTTATCGATCACTACCGGACAAGAG
ATGATAATGGCGTTTGGCAATCCCGGACTAGCGAATATCCAATCGGTGATATCGCGGTAGAGTTTGTTTTGGATTCGGTC
ACGCCACTCAAATGA

Upstream 100 bases:

>100_bases
GCTGGCAGGACTAACAAGGCCGCGCAGCAAAGCTGGCGACCCTAGACCGCGCGGACAGTCGATCTGTCATGAACATAATA
TCTAGAATAGGATCTGTGTA

Downstream 100 bases:

>100_bases
CAAAAGGAGCCATATGCTGGGTGTCCTAAGTGCTTTCGAATCGGGTAGCTGGAGGTTTCTAACTTCCAGCCCCAACACCC
CCCTTGATGCGGCTCCGCAT

Product: peptidase M23B

Products: NA

Alternate protein names: Peptidase; Secreted Peptidase; Urea Transporter; Endopeptidase; M23/M37 Peptidase Domain-Containing Protein; Metalloendopeptidase-Like Membrane Protein; M23 Peptidase Domain Protein; Peptidase Family; M23 Peptidase Domain-Containing Protein; Peptidase Family M; M23/M37 Peptidase Domain Protein; M24/M37 Family Peptidase

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQLDISVPIEPTLFPSGDFNYL
VYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQLYERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPD
KLGHRMLVGDSVAEGPIIGTRHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY
YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVVLDIGDGQYAYYAHMKPGSIR
VKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILASEGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSV
TPLK

Sequences:

>Translated_404_residues
MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQLDISVPIEPTLFPSGDFNYL
VYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQLYERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPD
KLGHRMLVGDSVAEGPIIGTRHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY
YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVVLDIGDGQYAYYAHMKPGSIR
VKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILASEGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSV
TPLK
>Mature_404_residues
MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQLDISVPIEPTLFPSGDFNYL
VYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQLYERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPD
KLGHRMLVGDSVAEGPIIGTRHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY
YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVVLDIGDGQYAYYAHMKPGSIR
VKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILASEGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSV
TPLK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 43930; Mature: 43930

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQ
CEEEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCEE
LDISVPIEPTLFPSGDFNYLVYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQL
EEEECCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEECHHH
YERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPDKLGHRMLVGDSVAEGPIIGT
HHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEECHHHHCCEEEECCCCCCCCEEEC
RHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHHEEECCCCCCCCCCEE
YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVV
ECCHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE
LDIGDGQYAYYAHMKPGSIRVKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILAS
EECCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEECC
EGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSVTPLK
CCCCEEEECEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQ
CEEEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCEE
LDISVPIEPTLFPSGDFNYLVYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQL
EEEECCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEECHHH
YERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPDKLGHRMLVGDSVAEGPIIGT
HHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEECHHHHCCEEEECCCCCCCCEEEC
RHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHHEEECCCCCCCCCCEE
YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVV
ECCHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE
LDIGDGQYAYYAHMKPGSIRVKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILAS
EECCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEECC
EGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSVTPLK
CCCCEEEECEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA