| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yebA [C]
Identifier: 160874859
GI number: 160874859
Start: 2088816
End: 2090030
Strand: Direct
Name: yebA [C]
Synonym: Sbal195_1743
Alternate gene names: 160874859
Gene position: 2088816-2090030 (Clockwise)
Preceding gene: 160874858
Following gene: 160874861
Centisome position: 39.06
GC content: 49.14
Gene sequence:
>1215_bases ATGTTGATTGTACGTATCAAAAGCTTAGTCATACTTGCTTCTCTTGCAGTTGGCTGTACATCTTCCTTTGCTGCATCTTC ATTTAGACCTACGCCTGCGAAAGACTGCATACTCGCAAGTCCAATTCAAAGCTCGGCCTCTATTGGCGCATCAGTCAAGC CTCCATTCCCGCCAGTTCAACTTGATATTAGCGTGCCAATCGAGCCGACGCTCTTTCCAAGTGGTGACTTTAACTATTTG GTTTACGAGCTGCACTTTCAGAATTACACAGACGAATCATTAAAACTTCAGGAACTTGAGATAGTTGATGTAAGCCGCAC CCCAAGTAGAGCTGTTGTAGCCTTCACTGGCTCACAACTTTATGAACGCTTGCTGCCGATCGGTGCCGATAAGATCGACG ACGAACATCCTATTGATGGCGGAAAGAGAGCCGTGGCACTTATTTGCCTTGCTTTTGATAACGCTGTCACCATCCCAGAT AAGTTAGGGCATCGTATGCTAGTGGGTGACTCTGTGGCTGAAGGCCCCATCATCGGAACTCGGCATACAAAACTGAATAC GCTTGCTCCACCTGTGATGGGTAAGGACTGGGTCGCTGCCAATGGCCCGAGTCTTCATTCTCATCACAGAACTGGCCTAT TCGTCGCTGGCGGCGTCGCGCATCTCTCTCGTCGTTTCGCAATTGATTGGAAGCAAAAAGACGAGCAAGGCGAAATGTAC TATGGGGACGCGCGCGATGTTAGATCATACTATTCCTATGACGAGAAGGTTTTTGCGGTTGCAGATGCAACGGTAGTATC TGCTCAAGACGGTCTTCCTGATAACATTCCTCGCACCGCTGCTGGATTCAATACCGCTGTATCGCTCACCATGGAAAACG TCGCAGGCAACGCCGTCGTTCTTGATATTGGGGATGGACAGTACGCTTATTACGCGCACATGAAACCAGGCAGTATTCGC GTAAAGGCGGGGGAGCACGTCAAACGTGGTGATTGGCTAGGTCAGATCGGTAACTCAGGCGATTCCCGCTGGCCACATCT CCATTTTCAAGTTACTACCAGCCCAGATATTCTTGCCAGCGAAGGTTTGCCCTTTGTTATCGATCACTACCGGACAAGAG ATGATAATGGCGTTTGGCAATCCCGGACTAGCGAATATCCAATCGGTGATATCGCGGTAGAGTTTGTTTTGGATTCGGTC ACGCCACTCAAATGA
Upstream 100 bases:
>100_bases GCTGGCAGGACTAACAAGGCCGCGCAGCAAAGCTGGCGACCCTAGACCGCGCGGACAGTCGATCTGTCATGAACATAATA TCTAGAATAGGATCTGTGTA
Downstream 100 bases:
>100_bases CAAAAGGAGCCATATGCTGGGTGTCCTAAGTGCTTTCGAATCGGGTAGCTGGAGGTTTCTAACTTCCAGCCCCAACACCC CCCTTGATGCGGCTCCGCAT
Product: peptidase M23B
Products: NA
Alternate protein names: Peptidase; Secreted Peptidase; Urea Transporter; Endopeptidase; M23/M37 Peptidase Domain-Containing Protein; Metalloendopeptidase-Like Membrane Protein; M23 Peptidase Domain Protein; Peptidase Family; M23 Peptidase Domain-Containing Protein; Peptidase Family M; M23/M37 Peptidase Domain Protein; M24/M37 Family Peptidase
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQLDISVPIEPTLFPSGDFNYL VYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQLYERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPD KLGHRMLVGDSVAEGPIIGTRHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVVLDIGDGQYAYYAHMKPGSIR VKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILASEGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSV TPLK
Sequences:
>Translated_404_residues MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQLDISVPIEPTLFPSGDFNYL VYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQLYERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPD KLGHRMLVGDSVAEGPIIGTRHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVVLDIGDGQYAYYAHMKPGSIR VKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILASEGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSV TPLK >Mature_404_residues MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQLDISVPIEPTLFPSGDFNYL VYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQLYERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPD KLGHRMLVGDSVAEGPIIGTRHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVVLDIGDGQYAYYAHMKPGSIR VKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILASEGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSV TPLK
Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 43930; Mature: 43930
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQ CEEEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCEE LDISVPIEPTLFPSGDFNYLVYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQL EEEECCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEECHHH YERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPDKLGHRMLVGDSVAEGPIIGT HHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEECHHHHCCEEEECCCCCCCCEEEC RHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHHEEECCCCCCCCCCEE YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVV ECCHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE LDIGDGQYAYYAHMKPGSIRVKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILAS EECCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEECC EGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSVTPLK CCCCEEEECEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MLIVRIKSLVILASLAVGCTSSFAASSFRPTPAKDCILASPIQSSASIGASVKPPFPPVQ CEEEEEHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCEE LDISVPIEPTLFPSGDFNYLVYELHFQNYTDESLKLQELEIVDVSRTPSRAVVAFTGSQL EEEECCCCCEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEECHHH YERLLPIGADKIDDEHPIDGGKRAVALICLAFDNAVTIPDKLGHRMLVGDSVAEGPIIGT HHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEECHHHHCCEEEECCCCCCCCEEEC RHTKLNTLAPPVMGKDWVAANGPSLHSHHRTGLFVAGGVAHLSRRFAIDWKQKDEQGEMY CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHHEEECCCCCCCCCCEE YGDARDVRSYYSYDEKVFAVADATVVSAQDGLPDNIPRTAAGFNTAVSLTMENVAGNAVV ECCHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEE LDIGDGQYAYYAHMKPGSIRVKAGEHVKRGDWLGQIGNSGDSRWPHLHFQVTTSPDILAS EECCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCEECC EGLPFVIDHYRTRDDNGVWQSRTSEYPIGDIAVEFVLDSVTPLK CCCCEEEECEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA