| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874827
Identifier: 160874827
GI number: 160874827
Start: 2057232
End: 2057588
Strand: Reverse
Name: 160874827
Synonym: Sbal195_1710
Alternate gene names: NA
Gene position: 2057588-2057232 (Counterclockwise)
Preceding gene: 160874828
Following gene: 160874825
Centisome position: 38.48
GC content: 44.54
Gene sequence:
>357_bases ATGTTTATCATTCGCTGGATTTTAGGCAGGATCATTCTGTTTTTAAACTTCGTATTTAGCCCTAAAAAGCGCCAACGTCC ACTGGCAGAGCAACAACAGATTGATACTCAAACTCAAGCATTGGCCCTGTATCAGTATCCAGCTTGCCCATTTTGCGTAA AAGTCCGCCGTGCAATGCGCCGTCAGGGACTCAATATAGTGACCCACGACGCTAAAAAAGCGCCGCATAAAGATGAACTC ATCGCCCAAGGTGGCAAACAGCAAGTGCCTTGTCTACGTATTGAAGAAAACGGCCAAGTACAGTGGTTGTATGAATCTAA AGAAATCATTAACTACTTAGACCAACGCTTCGCCTAA
Upstream 100 bases:
>100_bases CACGCACGAATCGCTAAATCTCAGTTTCGTCGCACATTTGCGACGGCGCCGTTGATACACTAATCACTTTTCTACACACA TTATCATTGAGGTCACTGAC
Downstream 100 bases:
>100_bases ATCGCGGCGCAACTGTCTGTGTAAACATCCAAATATGTGCGCCCAGTACCTTTTTAATGAACTGTTTAATCGACTTTTCA ATGGACTTCCCAATGAACTT
Product: glutaredoxin
Products: NA
Alternate protein names: Glutaredoxin Family Protein; ATP-Dependent Helicase HrpB; Glutaredoxin-Like Protein; Glutaredoxin Family; Glutaredoxin Domain Protein
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MFIIRWILGRIILFLNFVFSPKKRQRPLAEQQQIDTQTQALALYQYPACPFCVKVRRAMRRQGLNIVTHDAKKAPHKDEL IAQGGKQQVPCLRIEENGQVQWLYESKEIINYLDQRFA
Sequences:
>Translated_118_residues MFIIRWILGRIILFLNFVFSPKKRQRPLAEQQQIDTQTQALALYQYPACPFCVKVRRAMRRQGLNIVTHDAKKAPHKDEL IAQGGKQQVPCLRIEENGQVQWLYESKEIINYLDQRFA >Mature_118_residues MFIIRWILGRIILFLNFVFSPKKRQRPLAEQQQIDTQTQALALYQYPACPFCVKVRRAMRRQGLNIVTHDAKKAPHKDEL IAQGGKQQVPCLRIEENGQVQWLYESKEIINYLDQRFA
Specific function: Unknown
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13915; Mature: 13915
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIIRWILGRIILFLNFVFSPKKRQRPLAEQQQIDTQTQALALYQYPACPFCVKVRRAMR CCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RQGLNIVTHDAKKAPHKDELIAQGGKQQVPCLRIEENGQVQWLYESKEIINYLDQRFA HCCCCEEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCCEEEEECHHHHHHHHHHHCC >Mature Secondary Structure MFIIRWILGRIILFLNFVFSPKKRQRPLAEQQQIDTQTQALALYQYPACPFCVKVRRAMR CCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RQGLNIVTHDAKKAPHKDELIAQGGKQQVPCLRIEENGQVQWLYESKEIINYLDQRFA HCCCCEEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCCEEEEECHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA