| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is srmB [H]
Identifier: 160874799
GI number: 160874799
Start: 2029455
End: 2030810
Strand: Reverse
Name: srmB [H]
Synonym: Sbal195_1682
Alternate gene names: 160874799
Gene position: 2030810-2029455 (Counterclockwise)
Preceding gene: 160874801
Following gene: 160874798
Centisome position: 37.98
GC content: 47.05
Gene sequence:
>1356_bases TTGCAATTTACCGATTTTTCTCTGGACCAGCGTCTGCTTCAAAGCATAAAACATATGGGGATCACTGAACCCACCGCCAT CCAGGAACAAGCACTGCCTATCGCATTGGCAGGTAAAGATTTAATGGCGTCATCAAAAACAGGCTCAGGTAAAACCTTAG CGTTTTTGTTACCCGCATTGCAAAGAGTCATTTCTACCCGCTCACTGTCAAAACGCGATCCTAGAGTATTGATTTTATTA CCGACCCGCGAACTAGCACATCAAGTGTATAGTCAGCTTCGCTTGCTGGTCGCCAACACCCAATACAAGGCCATCAGCGT TCTGGGCGGTGAAAACTTTAACGACCAAGCGAAAGCCCTAGCGAAAGAACCGCATTTTATTGTCGCGACGCCAGGCCGTA TCGCCGATCATCTTGAGCAAAAACATCTATTCCTAAATGGCTTAGAATTACTCGTGCTCGATGAAGCCGACCGCATGTTA GATTTAGGCTTTGCCCCTCAGTTAAAAGCCATCAACGATGCTGCCGATCATAAACGTCGTCAAACGCTGATGTTTTCTGC CACATTAGATCATGACGAAATCAATGATATCGCGGCAACGCTGTTAAAAAATCCAGCGCACGTAGCGATTGGCGCGGCTC ACTCTGAGCATAACGACATTCACCAACGCATCTTCTTATGTGACCACTTAGACCATAAAGAAGCGTTATTAGCCCGTTTA CTTAAAGATGAAACACACAAGCAAGTGATCATCTTTACCGCGACGCGCCCAGATACAGAGCGCTTAGCCGCTAAATTAAC TGCGCAAGGTTTTGCAACCGCAGCACTCAGCGGTGATTTAAAGCAAGCCGCACGCAACCAAATCATGGACCAATTTGCCC GTGGCCAACAACAAGTCCTAGTGACGACCGATGTCGCCTCTCGTGGTCTGGATTTGCTCAATGTGTCCTTAGTTGTTAAC TTCGACATGCCTAAATTTGCCGAGGAATACGTGCATCGTATCGGTCGTACTGGCCGTGCTGGTGCGAAAGGTGATGCGAT ATCGCTCGTCGGGCCTAAAGATTGGGATAACTTTAAGAAAGTCCAAGTGTTCCTTAGAAAGACCTTTGAGATCAGTACGA TTCCAGGTCTAGAAGCTAAATTTAGTGGTCTAAAAAGCAAAGCCAAACAGACACCAGCAAAACGTGTTGCTAAAGCCGAG CTTGCTAAAGGTAAGAGCAAAAGAACTAAAGCAGCCACACCGGCGCCTTCACGGGATAAGCGTTTTATCACGGGCGTGGA CATTGGCGATGCACCAATGCGTAAAAAGCCTGCTGCGGCGAAATTACTGCAAGACAATGATACAGAAGAAGTTTAG
Upstream 100 bases:
>100_bases TAAATCCATGCGTGAAGCAGAGATAATCACCGATGTGGATAGCTGAGTTAGGGCGATTAAGGCTATAATCTGCCCTTACT AAGATTTAGGGGATATACCT
Downstream 100 bases:
>100_bases AACAAATTAATGCATACATGCCGGTGGATTTAACATCAGATTTTATTTCTGATACACAATACATTGGCTGATCGAATACT GGGAATTGACGCACTAAGCG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRSLSKRDPRVLILL PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRML DLGFAPQLKAINDAADHKRRQTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL LKDETHKQVIIFTATRPDTERLAAKLTAQGFATAALSGDLKQAARNQIMDQFARGQQQVLVTTDVASRGLDLLNVSLVVN FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAE LAKGKSKRTKAATPAPSRDKRFITGVDIGDAPMRKKPAAAKLLQDNDTEEV
Sequences:
>Translated_451_residues MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRSLSKRDPRVLILL PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRML DLGFAPQLKAINDAADHKRRQTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL LKDETHKQVIIFTATRPDTERLAAKLTAQGFATAALSGDLKQAARNQIMDQFARGQQQVLVTTDVASRGLDLLNVSLVVN FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAE LAKGKSKRTKAATPAPSRDKRFITGVDIGDAPMRKKPAAAKLLQDNDTEEV >Mature_451_residues MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRSLSKRDPRVLILL PTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRML DLGFAPQLKAINDAADHKRRQTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL LKDETHKQVIIFTATRPDTERLAAKLTAQGFATAALSGDLKQAARNQIMDQFARGQQQVLVTTDVASRGLDLLNVSLVVN FDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKKVQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAE LAKGKSKRTKAATPAPSRDKRFITGVDIGDAPMRKKPAAAKLLQDNDTEEV
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=360, Percent_Identity=38.3333333333333, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI45446743, Length=360, Percent_Identity=38.3333333333333, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=39.344262295082, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=37.9888268156425, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=37.9888268156425, Blast_Score=244, Evalue=9e-65, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=37.9888268156425, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=37.9888268156425, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=36.6492146596859, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=37.431693989071, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=37.5675675675676, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=37.5675675675676, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=37.6693766937669, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=37.6693766937669, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=37.6693766937669, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI20149629, Length=422, Percent_Identity=34.3601895734597, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI148613856, Length=356, Percent_Identity=37.0786516853933, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI38201710, Length=356, Percent_Identity=37.0786516853933, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI222352149, Length=357, Percent_Identity=36.9747899159664, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=36.6754617414248, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=36.0795454545455, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI13514831, Length=359, Percent_Identity=35.933147632312, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=35.8333333333333, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=36.2068965517241, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI38327634, Length=383, Percent_Identity=35.2480417754569, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI188035877, Length=376, Percent_Identity=35.3723404255319, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI7661920, Length=354, Percent_Identity=34.180790960452, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI164664518, Length=376, Percent_Identity=33.7765957446808, Blast_Score=202, Evalue=8e-52, Organism=Homo sapiens, GI41327776, Length=421, Percent_Identity=31.5914489311164, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI51094101, Length=374, Percent_Identity=34.7593582887701, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=33.8709677419355, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI164419743, Length=374, Percent_Identity=34.7593582887701, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=33.8753387533875, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI13129006, Length=389, Percent_Identity=32.133676092545, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=32.5905292479109, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=32.5905292479109, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI8922886, Length=389, Percent_Identity=33.6760925449871, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI50659095, Length=380, Percent_Identity=33.9473684210526, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=32.089552238806, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI164419732, Length=360, Percent_Identity=34.7222222222222, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI6005743, Length=389, Percent_Identity=32.9048843187661, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI17505907, Length=406, Percent_Identity=29.5566502463054, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI41327779, Length=370, Percent_Identity=31.6216216216216, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI62241022, Length=373, Percent_Identity=32.9758713136729, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=31.5492957746479, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=31.5642458100559, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=31.5642458100559, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI256223453, Length=364, Percent_Identity=28.8461538461538, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI154759257, Length=364, Percent_Identity=31.5934065934066, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI62241024, Length=351, Percent_Identity=31.9088319088319, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI9966805, Length=348, Percent_Identity=31.0344827586207, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=28.8288288288288, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI256773275, Length=416, Percent_Identity=28.8461538461538, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=34.4186046511628, Blast_Score=123, Evalue=4e-28, Organism=Escherichia coli, GI1788930, Length=382, Percent_Identity=40.3141361256544, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=39.2105263157895, Blast_Score=259, Evalue=3e-70, Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=34.6666666666667, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=36.8700265251989, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1787605, Length=396, Percent_Identity=38.6363636363636, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI48994977, Length=356, Percent_Identity=26.123595505618, Blast_Score=87, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=36.9565217391304, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=36.9565217391304, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI32565321, Length=372, Percent_Identity=37.0967741935484, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=36.9565217391304, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=36.5591397849462, Blast_Score=238, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=39.4957983193277, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71995718, Length=371, Percent_Identity=39.3530997304582, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=35.2185089974293, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI115533224, Length=333, Percent_Identity=38.7387387387387, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=33.6, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=36.5384615384615, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=36.1344537815126, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=35.230352303523, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI71995724, Length=352, Percent_Identity=34.6590909090909, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507121, Length=352, Percent_Identity=34.6590909090909, Blast_Score=206, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=34.3163538873995, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI115532548, Length=391, Percent_Identity=33.7595907928389, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=35.752688172043, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=33.9622641509434, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71999646, Length=380, Percent_Identity=32.6315789473684, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=32.033426183844, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71999644, Length=380, Percent_Identity=32.6315789473684, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=31.413612565445, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17537549, Length=376, Percent_Identity=32.7127659574468, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17552114, Length=371, Percent_Identity=31.266846361186, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17505370, Length=391, Percent_Identity=32.9923273657289, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=31.1475409836066, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17507641, Length=412, Percent_Identity=30.5825242718447, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI32564046, Length=396, Percent_Identity=30.5555555555556, Blast_Score=161, Evalue=6e-40, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=33.7696335078534, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI25148203, Length=409, Percent_Identity=27.6283618581907, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=28.9398280802292, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17536099, Length=387, Percent_Identity=31.266149870801, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17536101, Length=387, Percent_Identity=31.266149870801, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=29.9719887955182, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17536103, Length=387, Percent_Identity=31.266149870801, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17556951, Length=339, Percent_Identity=29.4985250737463, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=29.0140845070423, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI71997889, Length=371, Percent_Identity=28.8409703504043, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI25148291, Length=334, Percent_Identity=26.6467065868263, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17557982, Length=385, Percent_Identity=23.8961038961039, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=42.7272727272727, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17565430, Length=384, Percent_Identity=22.65625, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71982862, Length=191, Percent_Identity=30.3664921465969, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17566630, Length=337, Percent_Identity=21.9584569732938, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321856, Length=417, Percent_Identity=36.21103117506, Blast_Score=246, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=363, Percent_Identity=39.3939393939394, Blast_Score=245, Evalue=9e-66, Organism=Saccharomyces cerevisiae, GI6324778, Length=362, Percent_Identity=39.2265193370166, Blast_Score=240, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=37.5, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6321360, Length=355, Percent_Identity=38.8732394366197, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=363, Percent_Identity=36.3636363636364, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6320224, Length=383, Percent_Identity=32.8981723237598, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=34.6478873239437, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6320041, Length=374, Percent_Identity=34.2245989304813, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=36.0742705570292, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=33.0623306233062, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=33.0623306233062, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=356, Percent_Identity=35.6741573033708, Blast_Score=193, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=32.8804347826087, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6320173, Length=420, Percent_Identity=30.2380952380952, Blast_Score=186, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6319714, Length=359, Percent_Identity=32.8690807799443, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=34.0599455040872, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=31.4769975786925, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=425, Percent_Identity=30.3529411764706, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=373, Percent_Identity=31.9034852546917, Blast_Score=169, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6320400, Length=369, Percent_Identity=28.9972899728997, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=26.7303102625298, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=29.4277929155313, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6324366, Length=358, Percent_Identity=28.4916201117318, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6322876, Length=181, Percent_Identity=36.4640883977901, Blast_Score=106, Evalue=6e-24, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=39.8876404494382, Blast_Score=253, Evalue=1e-67, Organism=Drosophila melanogaster, GI28574962, Length=354, Percent_Identity=38.7005649717514, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=37.8531073446328, Blast_Score=241, Evalue=7e-64, Organism=Drosophila melanogaster, GI18857967, Length=386, Percent_Identity=35.2331606217617, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI21356161, Length=376, Percent_Identity=36.7021276595745, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24644479, Length=354, Percent_Identity=37.2881355932203, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI24644483, Length=354, Percent_Identity=37.2881355932203, Blast_Score=234, Evalue=7e-62, Organism=Drosophila melanogaster, GI24644487, Length=354, Percent_Identity=37.2881355932203, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI45551833, Length=354, Percent_Identity=37.2881355932203, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24644485, Length=354, Percent_Identity=37.2881355932203, Blast_Score=234, Evalue=8e-62, Organism=Drosophila melanogaster, GI24585582, Length=405, Percent_Identity=35.0617283950617, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI281361218, Length=354, Percent_Identity=37.2881355932203, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI24644481, Length=354, Percent_Identity=37.2881355932203, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=38.5269121813031, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=37.6344086021505, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=35.1706036745407, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24642151, Length=355, Percent_Identity=33.8028169014084, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=36.1111111111111, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI24645031, Length=354, Percent_Identity=34.180790960452, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI28575014, Length=388, Percent_Identity=35.0515463917526, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI28571808, Length=378, Percent_Identity=34.3915343915344, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI28571809, Length=378, Percent_Identity=34.3915343915344, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=37.1428571428571, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=35.1800554016621, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI24642822, Length=373, Percent_Identity=31.0991957104558, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=33.6927223719677, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=33.6927223719677, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=33.6927223719677, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=33.6927223719677, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583281, Length=380, Percent_Identity=32.8947368421053, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583279, Length=380, Percent_Identity=32.8947368421053, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24666101, Length=372, Percent_Identity=31.989247311828, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=32.8767123287671, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI17647335, Length=387, Percent_Identity=30.2325581395349, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24581954, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24581952, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24581956, Length=357, Percent_Identity=31.6526610644258, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI17136666, Length=492, Percent_Identity=28.4552845528455, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=30, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI20130173, Length=459, Percent_Identity=27.0152505446623, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=29.1411042944785, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI19920478, Length=381, Percent_Identity=29.3963254593176, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI18859659, Length=210, Percent_Identity=36.1904761904762, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI28571338, Length=210, Percent_Identity=36.1904761904762, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=26.8571428571429, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49674; Mature: 49674
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAL CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCHHHCCCCCCCCCHHHHHHHHH QRVISTRSLSKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKAL HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH AKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRMLDLGFAPQLKAINDAADHKRR HCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH QTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL HEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHH LKDETHKQVIIFTATRPDTERLAAKLTAQGFATAALSGDLKQAARNQIMDQFARGQQQVL HHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VTTDVASRGLDLLNVSLVVNFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKK EEECHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHH VQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAELAKGKSKRTKAATPAPSRDK HHHHHHHHHEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RFITGVDIGDAPMRKKPAAAKLLQDNDTEEV EEEEECCCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MQFTDFSLDQRLLQSIKHMGITEPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPAL CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCHHHCCCCCCCCCHHHHHHHHH QRVISTRSLSKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKAL HHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH AKEPHFIVATPGRIADHLEQKHLFLNGLELLVLDEADRMLDLGFAPQLKAINDAADHKRR HCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH QTLMFSATLDHDEINDIAATLLKNPAHVAIGAAHSEHNDIHQRIFLCDHLDHKEALLARL HEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHH LKDETHKQVIIFTATRPDTERLAAKLTAQGFATAALSGDLKQAARNQIMDQFARGQQQVL HHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VTTDVASRGLDLLNVSLVVNFDMPKFAEEYVHRIGRTGRAGAKGDAISLVGPKDWDNFKK EEECHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHH VQVFLRKTFEISTIPGLEAKFSGLKSKAKQTPAKRVAKAELAKGKSKRTKAATPAPSRDK HHHHHHHHHEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RFITGVDIGDAPMRKKPAAAKLLQDNDTEEV EEEEECCCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]