| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is folD [H]
Identifier: 160874742
GI number: 160874742
Start: 1963384
End: 1964238
Strand: Reverse
Name: folD [H]
Synonym: Sbal195_1625
Alternate gene names: 160874742
Gene position: 1964238-1963384 (Counterclockwise)
Preceding gene: 160874749
Following gene: 160874740
Centisome position: 36.73
GC content: 49.71
Gene sequence:
>855_bases ATGACAGCCCAAATAATCGACGGCAAGGCGATTGCTCAATCCATCCGCACTAAGCTCAGCGAAAAAGTCACCGCCCGCAA AGAGGCTGGACAGCGCATTCCGGGTTTAGCCGTAGTATTAGTGGGAGCCGATCCGGCATCACAGGTTTATGTTGGAAGCA AACGTAAGGCCTGTGAGGAAGTTGGATTTATTTCTCGTTCATACGATTTAGAAACAAGTTGCAGTGAAGATGAGTTGCTG AGCCTTATTGATAGTCTGAATGAAGATCCGACCATCGATGGCATTTTAGTGCAACTGCCACTACCCGCCCATATCGAAGA TTCAAAAGTCATCGAACGTATTCGCCCAGATAAAGATGTCGATGGATTTCACCCGTACAACGTTGGCCGTTTAGCCCAGC GTATTCCTGTGCTGCGCTCTTGCACGCCGATGGGCATAATGACACTCATCAAATCCACCGGCGTTGATACCTATGGTTTA GATGCTGTCGTGGTTGGTGCGTCTAATATTGTCGGCCGCCCTATGACGTTAGAATTACTGTTGGCGGGTTGCACTACGAC CACTTGCCACCGCTTCACGAAGAATCTTGAGCAAAAAATTCGTATCGCAGATCTCGTGGTTGTCGCAGTCGGTAAACCCG GCTTCATTCCTGGTGAGTGGATCAAGCCCGGCGCTATCGTCATTGACGTAGGCATTAACCGTTTAGATAACGGTACCTTA GTCGGCGATGTGCAATATGACGTGGCGGCGCAAAATGCCAGCTTTATCACCCCAGTCCCCGGCGGTGTAGGCCCGATGAC AATTGCGAGTCTATTGGAAAACACCTTATACGCTGCCGAGCAATATCACGACTAA
Upstream 100 bases:
>100_bases CATGACACAGTAGCTGTGCCCTGTTAAAATAGCCGCGATTGCCAATCTCTGTGTTAACTACTGTTTTAACCATCGCCCAT ATAAAGGATATCCTACACCC
Downstream 100 bases:
>100_bases GTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCTAAGTTCCAAGTTCTAAGTTCTGCAAG CATAAAAAACCTGCATGATG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELL SLIDSLNEDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGL DAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTL VGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD
Sequences:
>Translated_284_residues MTAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELL SLIDSLNEDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGL DAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTL VGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD >Mature_283_residues TAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLS LIDSLNEDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGLD AVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTLV GDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=298, Percent_Identity=46.6442953020134, Blast_Score=235, Evalue=3e-62, Organism=Homo sapiens, GI222418558, Length=294, Percent_Identity=42.1768707482993, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI94721354, Length=294, Percent_Identity=43.1972789115646, Blast_Score=213, Evalue=1e-55, Organism=Homo sapiens, GI36796743, Length=220, Percent_Identity=28.1818181818182, Blast_Score=78, Evalue=8e-15, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=71.4788732394366, Blast_Score=425, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17568735, Length=294, Percent_Identity=39.4557823129252, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=41.2751677852349, Blast_Score=229, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=41.8118466898955, Blast_Score=218, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6322933, Length=311, Percent_Identity=26.6881028938907, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=47.8114478114478, Blast_Score=257, Evalue=7e-69, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=47.8114478114478, Blast_Score=257, Evalue=8e-69, Organism=Drosophila melanogaster, GI62472483, Length=290, Percent_Identity=45.1724137931035, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI45551871, Length=290, Percent_Identity=45.1724137931035, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24645718, Length=290, Percent_Identity=45.1724137931035, Blast_Score=228, Evalue=3e-60, Organism=Drosophila melanogaster, GI17137370, Length=290, Percent_Identity=45.1724137931035, Blast_Score=228, Evalue=3e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30449; Mature: 30318
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00766 THF_DHG_CYH_1 ; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEE CCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHHHHH VGFISRSYDLETSCSEDELLSLIDSLNEDPTIDGILVQLPLPAHIEDSKVIERIRPDKDV HHCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELL CCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCEEEHH LAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTL HHCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEE VGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD EEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEE CCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHHHHH VGFISRSYDLETSCSEDELLSLIDSLNEDPTIDGILVQLPLPAHIEDSKVIERIRPDKDV HHCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELL CCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCEEEHH LAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGTL HHCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEE VGDVQYDVAAQNASFITPVPGGVGPMTIASLLENTLYAAEQYHD EEEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA