| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874528
Identifier: 160874528
GI number: 160874528
Start: 1691285
End: 1691824
Strand: Direct
Name: 160874528
Synonym: Sbal195_1410
Alternate gene names: NA
Gene position: 1691285-1691824 (Clockwise)
Preceding gene: 160874527
Following gene: 160874530
Centisome position: 31.63
GC content: 45.19
Gene sequence:
>540_bases ATGGCTAAGTTCAGAGTAGCAAGTGTTTTATTATTGAGTGCGGCAGCGCTGCAAGTGAATGCGTCAGAATTTAATCTTGG GTTGAATAACGATGTGGTTTCTACTGAGTTAGAACTGCAATTGAGCAAAGATACTAACGCAGTGTTAGGTTATATCTATG CTGACGAGGGCGGCCATATTGCCCAAGGTGCAATGCACATGACCCATGATGTGGGCGTGCATCACTTTGAAGTTGGCGCT AAGTTAAGTCAGCTTTGGTCTGATTATTCTCCAAATGGCAGCGCCATTTCTGTTGGCGGCCGTTATGCGCTATCTATGGG ACCTAATATTTCATTACACGCCGCCGCTTACTACGCACCGTCAGTCTTATCGTTTGGTAATGTTGATGGTCAATATGAGC TCGATTCAAAAGTGCAATACCGCGTAACGCCAAACATGGCGTTTTATGTTGGTTATCGCAAGATTGCCTATGAGTACGAT GACGCCCGCGATTTCACTTTCGAAGATGGCGTGTATATTGGCGGTAAATTCCGCTTCTAA
Upstream 100 bases:
>100_bases CTCGCAAATTATCCCCATTTATACGCAAATAGGCTGATTTTCTTTATTTATTCGGTATGATCCGCGGCTATTACCCACAG TCATTTATTGAGGTGTTTTT
Downstream 100 bases:
>100_bases AACAAATCGTTTTGATCTCGCTGCGTTAACTTAGCAGTCGATGTAAAGAGCCGGCCGAGGTCAACTTCGCCGGCTTTTCC ATTTTGCTTTTAGCTCGCTG
Product: YfaZ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQLSKDTNAVLGYIYADEGGHIAQGAMHMTHDVGVHHFEVGA KLSQLWSDYSPNGSAISVGGRYALSMGPNISLHAAAYYAPSVLSFGNVDGQYELDSKVQYRVTPNMAFYVGYRKIAYEYD DARDFTFEDGVYIGGKFRF
Sequences:
>Translated_179_residues MAKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQLSKDTNAVLGYIYADEGGHIAQGAMHMTHDVGVHHFEVGA KLSQLWSDYSPNGSAISVGGRYALSMGPNISLHAAAYYAPSVLSFGNVDGQYELDSKVQYRVTPNMAFYVGYRKIAYEYD DARDFTFEDGVYIGGKFRF >Mature_178_residues AKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQLSKDTNAVLGYIYADEGGHIAQGAMHMTHDVGVHHFEVGAK LSQLWSDYSPNGSAISVGGRYALSMGPNISLHAAAYYAPSVLSFGNVDGQYELDSKVQYRVTPNMAFYVGYRKIAYEYDD ARDFTFEDGVYIGGKFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19597; Mature: 19466
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQLSKDTNAVLGYIYADEGGHI CCCHHHHHHHHHHHHHEEEEHHHEECCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCE AQGAMHMTHDVGVHHFEVGAKLSQLWSDYSPNGSAISVGGRYALSMGPNISLHAAAYYAP ECCEEEEHHCCCCEEEEHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCEEEEEEEEECC SVLSFGNVDGQYELDSKVQYRVTPNMAFYVGYRKIAYEYDDARDFTFEDGVYIGGKFRF CEEECCCCCCEEEECCEEEEEECCCEEEEEEEEEEEEECCCCCCCEECCCEEEEEEECC >Mature Secondary Structure AKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQLSKDTNAVLGYIYADEGGHI CCHHHHHHHHHHHHHEEEEHHHEECCCCCCEEEEEEEEEECCCCCEEEEEEEECCCCCE AQGAMHMTHDVGVHHFEVGAKLSQLWSDYSPNGSAISVGGRYALSMGPNISLHAAAYYAP ECCEEEEHHCCCCEEEEHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCEEEEEEEEECC SVLSFGNVDGQYELDSKVQYRVTPNMAFYVGYRKIAYEYDDARDFTFEDGVYIGGKFRF CEEECCCCCCEEEECCEEEEEECCCEEEEEEEEEEEEECCCCCCCEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA