| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874508
Identifier: 160874508
GI number: 160874508
Start: 1663585
End: 1664229
Strand: Direct
Name: 160874508
Synonym: Sbal195_1390
Alternate gene names: NA
Gene position: 1663585-1664229 (Clockwise)
Preceding gene: 160874507
Following gene: 160874509
Centisome position: 31.11
GC content: 51.47
Gene sequence:
>645_bases GTGAGTTGTTGCCCGGATAAGCCAAGTTTTGTATTAGAGGGTGAGCCTGCGAGCACTGTGGTTTTATTGGCCCACGGCGC GGGCGCTAACATGGATTCTGAGTTTATGCAGGCCATGTCGGCGGGGCTTGTGGCTAAGGGCTACCAAGTGATGCGCTTTA ATTTTCCCTATATGCAGGCCAATGCCGTCGATGGCAAACGGCGTCCACCGGACCGCGCGCCTAAATTGCTCGCGTGTTTT ACACAGATGCTCGATATAGCCCATTCACAACCTAAGGTCGAGCGTGTCGTACTGATGGGCAAATCAATGGGCGGACGTAT GGCAGCGTTATTAGCCTGCGATCCCGCATTAGCGGCGCGCATCGATAGAGTCATTTGTTTAGGTTACCCCTTTGTGCCAC TTAAAGGCGGCGAGCCTAGATTGGAACCTTTGAATGAATGCCAAGTCCCAGTATTAGTCGTACAGGGCGAGCGGGATAAG TTTGGTGGCAAAGAGCAGATCCCAAATTGGCCCTTGAAGGCAGAGATAGGATTGGCTTGGATAACCGACGGTGATCATAG TTTTGTCCCAAGAAAGTCGTCAGGCACCACTGAAGCGGCTAACCTTGCACGTGCCATTGATTTATCTAGCGATTTTATTG GTTAG
Upstream 100 bases:
>100_bases GATGCTTACTACTTGGTTTGCCAGCAGAATCACGCAGAACTGGGTAAGGTCGTCGCGTTTCGCGAATGGATGTTAGACAT GTTTGCTGAGGAGTCGCGCA
Downstream 100 bases:
>100_bases CTTAATGTTGAGCGAATGAATGTTGAATGAGTTAAGCCCATTCCAGCAGGAGAGTTAAATGCGTAAAGGTCTATTGTTAC TCGCCGCCGTGAGCGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSCCPDKPSFVLEGEPASTVVLLAHGAGANMDSEFMQAMSAGLVAKGYQVMRFNFPYMQANAVDGKRRPPDRAPKLLACF TQMLDIAHSQPKVERVVLMGKSMGGRMAALLACDPALAARIDRVICLGYPFVPLKGGEPRLEPLNECQVPVLVVQGERDK FGGKEQIPNWPLKAEIGLAWITDGDHSFVPRKSSGTTEAANLARAIDLSSDFIG
Sequences:
>Translated_214_residues MSCCPDKPSFVLEGEPASTVVLLAHGAGANMDSEFMQAMSAGLVAKGYQVMRFNFPYMQANAVDGKRRPPDRAPKLLACF TQMLDIAHSQPKVERVVLMGKSMGGRMAALLACDPALAARIDRVICLGYPFVPLKGGEPRLEPLNECQVPVLVVQGERDK FGGKEQIPNWPLKAEIGLAWITDGDHSFVPRKSSGTTEAANLARAIDLSSDFIG >Mature_213_residues SCCPDKPSFVLEGEPASTVVLLAHGAGANMDSEFMQAMSAGLVAKGYQVMRFNFPYMQANAVDGKRRPPDRAPKLLACFT QMLDIAHSQPKVERVVLMGKSMGGRMAALLACDPALAARIDRVICLGYPFVPLKGGEPRLEPLNECQVPVLVVQGERDKF GGKEQIPNWPLKAEIGLAWITDGDHSFVPRKSSGTTEAANLARAIDLSSDFIG
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23088; Mature: 22957
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCCPDKPSFVLEGEPASTVVLLAHGAGANMDSEFMQAMSAGLVAKGYQVMRFNFPYMQA CCCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHCHHHCCEEEEEEECCEEEE NAVDGKRRPPDRAPKLLACFTQMLDIAHSQPKVERVVLMGKSMGGRMAALLACDPALAAR ECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHH IDRVICLGYPFVPLKGGEPRLEPLNECQVPVLVVQGERDKFGGKEQIPNWPLKAEIGLAW HCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEE ITDGDHSFVPRKSSGTTEAANLARAIDLSSDFIG EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SCCPDKPSFVLEGEPASTVVLLAHGAGANMDSEFMQAMSAGLVAKGYQVMRFNFPYMQA CCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHCHHHCCEEEEEEECCEEEE NAVDGKRRPPDRAPKLLACFTQMLDIAHSQPKVERVVLMGKSMGGRMAALLACDPALAAR ECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCHHHHHH IDRVICLGYPFVPLKGGEPRLEPLNECQVPVLVVQGERDKFGGKEQIPNWPLKAEIGLAW HCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEE ITDGDHSFVPRKSSGTTEAANLARAIDLSSDFIG EECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA