| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is mepA [H]
Identifier: 160874486
GI number: 160874486
Start: 1636865
End: 1638220
Strand: Direct
Name: mepA [H]
Synonym: Sbal195_1368
Alternate gene names: 160874486
Gene position: 1636865-1638220 (Clockwise)
Preceding gene: 160874485
Following gene: 160874487
Centisome position: 30.61
GC content: 49.19
Gene sequence:
>1356_bases ATGACAGCAATAACATCTAATCATGCTCCTGCGGATATGAGCCTGCTCGAGGAGCCGATTGCGAAGCTTTTTTGGCGCTA TACCATACCCACCATTGCCTCTATGTTGGTGACGGGCGTCTATGTGACGATTGATGGCATCTTCGTTGGCCACTATTTGG GTGAAACTGGGCTGGCGGGGATGATGTTAGCCTATCCAGTCGGCGCTATTTTGTATGCGATTGGCGCCATGATCGGCATG GGCAGCGCGGCATTAGTGTCGATCAATCTTGGTCAAGGTAATGTGGCTAAGGCCCGTAAATTGCTCGGTAATGCTTTTAG TTTGTGTTTATTGGCGGGGGCCATTTTTGCCCTCATGGGTGGGATATTCTCGCGGGATATTTTGATCGCCCTCGGGGCGC AGGGGGATATTCTCGAAAACGCCAACGAATACTTGTTCTGGTATTTCGCCTTGTGTCATTTCCCCATTATTTCAATGACC TTCACCACATTGCTGCGTAATGACGGTCGGCCATCTATGGTGACTTGGGTGTTGATCTTGGGCGGTGTATTAAACACTTT CTTAGATTGGCTATTTATTGTGGTCTTCCCCTTTGGTTTAGCGGGCGCTGCGATTGCGACTATGATGTCGCAGGCGGTGA CTGGGCTTTTGTGTTTGCAGCATTTTTTCAGTCCTCGGACTCAGTTGAGGATCGACCTTGAGCAGATGAAGCTTAAGCTC GACAATTGCTTGAACATAGCCCGCGTGGGTTTACCCAGCTTTTTGATGAACCTTTATTTATCGATAGTGTTAACCCTACA CAACACAGCTTTTTTGTGGGTGGGCGGCCCCTTACACGTGGCAGCCTATGGCGTAGTCAGTTACACAGAAGCATTCTTCT ATTTGATTTTCGAAGGTATTGCCCTCGGCACGCAGCCAATTTATAGCTTTAATGCGGGCGCTGGGCGTTTCGATCGAGTT AAGCAAGCACGTAATATTGCCTTTGGCATGACGCTGCTCACCGCAGTGTTGGGCTTAGCGCTGATTTATTCTCGCCCTGA ATGGCTAGTGTATTTGTTTGCTGGCGATAATCAGAACCTAACGCCCGTGGCGATTGAAGGTATGCGCTGGTATTTCTGGG GCTTACCAATGGAAGGTTTAATCTTAGTCGGTGCGAGTTTCTTCCAAGCGATTAATTGCTCGAAACAAGCCTCTATGCTG ACCGGCGCGAAACTTATCCTGATCGCTGCGATTATCTACTGCTTCGCTTGGATGTTCGGTGTGATTGGTGTGTGGGTATC GCTCGCAACCTGTAGCACTATTCTGACGATATGGATGTTCTACGCCATGAAGCGAGTCGAGGCGCGGCTGCAATAA
Upstream 100 bases:
>100_bases TACGGCTGATTTTAGGTACAATCCATTGTCGCATTTTTGTTCACCCGATCATTTTTCTAAATAGATACGACTCTTGCCCC CTTTTTTGTGAGAAACGCTA
Downstream 100 bases:
>100_bases CTCTGTTTTGCTTGGGTCTTGGTTTTGCCTGCTTTTTTGCGTGCGCTGATGACGAGGGAAGAGGGCAAAAGAAGGCGAAA GACGCGGCCAGACAAGCGGT
Product: multi anti extrusion protein MatE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTAITSNHAPADMSLLEEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAIGAMIGM GSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAIFALMGGIFSRDILIALGAQGDILENANEYLFWYFALCHFPIISMT FTTLLRNDGRPSMVTWVLILGGVLNTFLDWLFIVVFPFGLAGAAIATMMSQAVTGLLCLQHFFSPRTQLRIDLEQMKLKL DNCLNIARVGLPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSFNAGAGRFDRV KQARNIAFGMTLLTAVLGLALIYSRPEWLVYLFAGDNQNLTPVAIEGMRWYFWGLPMEGLILVGASFFQAINCSKQASML TGAKLILIAAIIYCFAWMFGVIGVWVSLATCSTILTIWMFYAMKRVEARLQ
Sequences:
>Translated_451_residues MTAITSNHAPADMSLLEEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAIGAMIGM GSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAIFALMGGIFSRDILIALGAQGDILENANEYLFWYFALCHFPIISMT FTTLLRNDGRPSMVTWVLILGGVLNTFLDWLFIVVFPFGLAGAAIATMMSQAVTGLLCLQHFFSPRTQLRIDLEQMKLKL DNCLNIARVGLPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSFNAGAGRFDRV KQARNIAFGMTLLTAVLGLALIYSRPEWLVYLFAGDNQNLTPVAIEGMRWYFWGLPMEGLILVGASFFQAINCSKQASML TGAKLILIAAIIYCFAWMFGVIGVWVSLATCSTILTIWMFYAMKRVEARLQ >Mature_450_residues TAITSNHAPADMSLLEEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAIGAMIGMG SAALVSINLGQGNVAKARKLLGNAFSLCLLAGAIFALMGGIFSRDILIALGAQGDILENANEYLFWYFALCHFPIISMTF TTLLRNDGRPSMVTWVLILGGVLNTFLDWLFIVVFPFGLAGAAIATMMSQAVTGLLCLQHFFSPRTQLRIDLEQMKLKLD NCLNIARVGLPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSFNAGAGRFDRVK QARNIAFGMTLLTAVLGLALIYSRPEWLVYLFAGDNQNLTPVAIEGMRWYFWGLPMEGLILVGASFFQAINCSKQASMLT GAKLILIAAIIYCFAWMFGVIGVWVSLATCSTILTIWMFYAMKRVEARLQ
Specific function: Multidrug resistance efflux protein [H]
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MepA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002528 - InterPro: IPR015522 [H]
Pfam domain/function: PF01554 MatE [H]
EC number: NA
Molecular weight: Translated: 49386; Mature: 49255
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAITSNHAPADMSLLEEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCHHH MMLAYPVGAILYAIGAMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAIFALMG HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GIFSRDILIALGAQGDILENANEYLFWYFALCHFPIISMTFTTLLRNDGRPSMVTWVLIL HHHHCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GGVLNTFLDWLFIVVFPFGLAGAAIATMMSQAVTGLLCLQHFFSPRTQLRIDLEQMKLKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHH DNCLNIARVGLPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGI HHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ALGTQPIYSFNAGAGRFDRVKQARNIAFGMTLLTAVLGLALIYSRPEWLVYLFAGDNQNL HCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC TPVAIEGMRWYFWGLPMEGLILVGASFFQAINCSKQASMLTGAKLILIAAIIYCFAWMFG CCEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VIGVWVSLATCSTILTIWMFYAMKRVEARLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAITSNHAPADMSLLEEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCHHH MMLAYPVGAILYAIGAMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAIFALMG HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GIFSRDILIALGAQGDILENANEYLFWYFALCHFPIISMTFTTLLRNDGRPSMVTWVLIL HHHHCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GGVLNTFLDWLFIVVFPFGLAGAAIATMMSQAVTGLLCLQHFFSPRTQLRIDLEQMKLKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHH DNCLNIARVGLPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGI HHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ALGTQPIYSFNAGAGRFDRVKQARNIAFGMTLLTAVLGLALIYSRPEWLVYLFAGDNQNL HCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC TPVAIEGMRWYFWGLPMEGLILVGASFFQAINCSKQASMLTGAKLILIAAIIYCFAWMFG CCEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VIGVWVSLATCSTILTIWMFYAMKRVEARLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA