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The map label for this gene is glgB [H]

Identifier: 160874476

GI number: 160874476

Start: 1616721

End: 1618952

Strand: Direct

Name: glgB [H]

Synonym: Sbal195_1357

Alternate gene names: 160874476

Gene position: 1616721-1618952 (Clockwise)

Preceding gene: 160874475

Following gene: 160874477

Centisome position: 30.23

GC content: 49.91

Gene sequence:

>2232_bases
ATGATGACTCAAGCCAATGCCTATTTCTACGATGGCGCCGACGTCGCCCTACTTAATGGTCAATACACTGATGTTTTTTC
GCTTTTGGGTATGCACAGTGCCAACGAGGGTAAGGCATTAATTGTTCGTTGTTTTTTACGCAATGCCCTCAGTGTGGATG
TGATCAGCATTAAAGATGGCCGTAAAGTAGCGAGTCTGGACAAAGTCAACGAGCAGGGACTGTTCGCCGGTACTCTGGGG
CGACGCGTCAAACCGTTTCTCTATTTGCTGCGGGTAGAATATCCCCTGTGTCAGTTAGATATAGTCGACCCTTATCAGTT
TGATTCATTGCTTAATAGTGACGATATTTACCTGTTTGGTGAAGGCAGCGCCGAGCGCGCCTATGAGTTTTTAGGCGCCA
ACTGGCGTCAGACCCAAGGCGTTGAAGGTGTGCATTTTTGTGTGTGGGCACCCAATGCCAAAAGGGTCTCTGTGGTGGGG
GATTTCAACCATTGGGACGATACTCGCCATGTAATGCGCCAACATCTTGCCAATGGTTTGTGGGAGCTATTTCTGCCTAA
TGTGGTTGAAGGCGCCCACTATAAGTTTGATTTGGTTTATCAAAATGGTGAGCGTCATACCAAGTCCGACCCCATGGCGA
CTCAAATGGAATGCGCGCCCCATAATGCTTCTATCGTGCCCCCAAAAGCCCATCACAGTTGGAATGATACCGCTTGGATG
AGTAAACGCGCGGCGACTGCTTGGCATAAAGCGCCCATGTCGGCCTACGAAGTGCACTTAGGTTCGTGGCGTCGTAAGGG
AGAGCAAGGCGAGCAATATCTTGATTATCAAGACTTGATTGAACAGCTTATTCCCTATGTGAAGGAGCAAGGTTTTACCC
ACATTGAACTGATGCCGATCAGCGAGTTTCCCTTCGATGGTTCGTGGGGATATCAGCCTGTGGGTCTCTATGCACCGACC
CACAGATTTGGCGATGCCAATGGGTTAAAAGCCTTTGTGGATGCCTGCCATCAGGCGGGAATTGGTATCATCCTCGATTG
GGTGTCGGCACATTTTCCTAAGGATCCCCACGGCTTAGTGCGTTTCGATGGCACTTGTTTGTATGAGCATGAAGATCCTC
GCAAGGGCACACATCCCGATTGGGATACCTTGATTTATAACTATGATCGCGGTGAAGTGCGCAGTTTCTTGTTGAGTAAT
GCCTGTTACTGGCTGCGGGAGTTCCACTTTGATGGCCTGCGTCTCGATGCCGTGTCTTCTATGTTGTACCTCGATTACAG
CCGCGAGCCGGGCCAATGGCTGCCTAATGCCTATGGTGGACGGGAGAATCTCGAAGCCATTAGTTTCTTACAAATTTTGA
ATCAACGCCTATACCAAGCTTTCCCCGGCATTTGCATGATCGCCGAAGAGTCCACCGCCTTTGCGGGGGTGACTAAACCG
ACGGATCAGCAAGGTCTCGGCTTTGGCTTTAAATGGAACATGGGCTGGATGAATGACAGCTTAAGCTACTTAGGCCGAGA
TCCGCTTTACCGCCAATTCCACCATCATCAATTGACCTTCAGTTTGATGTACGCCTATACCGAGCAATTTATGTTGTCAG
TGAGTCACGATGAAGTGGTCCACGGCAAGGGCTCGTTGCTGCATAAAATTCCCGGTGACGATTGGCAGAAATTTGCGACC
CTGCGTGCTTATTACGGTTTTATGTGGGGGCATCCCGGTAAGAAATTACTCTTTATGGGCTGCGAGTTTGGTCAGCGAAA
TGAGTGGAACCATAACCAGAGTTTAGATTGGCACTTATTGGCTTATGAACCGCACCAAGGTGTGCAACGTTGGCTTAAAG
ATCTCAATCAATTATATCAAGACATGCCTGCTTTATCAGTTCAGGATTACGAGGGGGCAGGATTCAGTTGGCTAGATTGT
GAAAATAGCCGCGATAGCATCTTTACCTTTGTGCGTTACGGCTTAGCGGGTGATGCGCCGTTAGTGTTTGTCATCAACAT
GACGCCCCAATTGCACACTGGGTTCCGTATTGGTTTGCCCTTGGCGGGGGATTACCGCGAATACCTGAATAGCGATAGCC
AGATTTATGGTGGCAGTAACCAAGGTAATGCGGGCACTGTCGTTGCTGAGTCGCTGCCGTGGCAGGGCATGGCGCAGAGC
GCGCTGATCACTGTGCCGCCCTTGGGTTGTCTAGTGATTGGGCCTGCAACTGGATTGGCTGAGGCGAACTAG

Upstream 100 bases:

>100_bases
TGCCACATTATGCCATCCCTAAAGGTTCGATAATTAGGAGGTGTTATGCGGATAAAGAGTGCCAATTTGCAAGTTTAATT
GACTGATAAACGGAAGAAAA

Downstream 100 bases:

>100_bases
TATGCAAAAGCCCACAGCTGATGATATCAAGCTCAACCCTGACGCTAAACATAACCCTTCTCAAAATGAGAAATGGGCCT
TGGGAGCCGGTGAGCCTTTT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 743; Mature: 743

Protein sequence:

>743_residues
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNALSVDVISIKDGRKVASLDKVNEQGLFAGTLG
RRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFGEGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVG
DFNHWDDTRHVMRQHLANGLWELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPISEFPFDGSWGYQPVGLYAPT
HRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLVRFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSN
ACYWLREFHFDGLRLDAVSSMLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVVHGKGSLLHKIPGDDWQKFAT
LRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLLAYEPHQGVQRWLKDLNQLYQDMPALSVQDYEGAGFSWLDC
ENSRDSIFTFVRYGLAGDAPLVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
ALITVPPLGCLVIGPATGLAEAN

Sequences:

>Translated_743_residues
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNALSVDVISIKDGRKVASLDKVNEQGLFAGTLG
RRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFGEGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVG
DFNHWDDTRHVMRQHLANGLWELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPISEFPFDGSWGYQPVGLYAPT
HRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLVRFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSN
ACYWLREFHFDGLRLDAVSSMLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVVHGKGSLLHKIPGDDWQKFAT
LRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLLAYEPHQGVQRWLKDLNQLYQDMPALSVQDYEGAGFSWLDC
ENSRDSIFTFVRYGLAGDAPLVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
ALITVPPLGCLVIGPATGLAEAN
>Mature_743_residues
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNALSVDVISIKDGRKVASLDKVNEQGLFAGTLG
RRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFGEGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVG
DFNHWDDTRHVMRQHLANGLWELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPISEFPFDGSWGYQPVGLYAPT
HRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLVRFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSN
ACYWLREFHFDGLRLDAVSSMLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVVHGKGSLLHKIPGDDWQKFAT
LRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLLAYEPHQGVQRWLKDLNQLYQDMPALSVQDYEGAGFSWLDC
ENSRDSIFTFVRYGLAGDAPLVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
ALITVPPLGCLVIGPATGLAEAN

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=711, Percent_Identity=27.5668073136428, Blast_Score=184, Evalue=3e-46,
Organism=Escherichia coli, GI1789839, Length=721, Percent_Identity=49.9306518723994, Blast_Score=709, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=621, Percent_Identity=26.7310789049919, Blast_Score=191, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI32564391, Length=585, Percent_Identity=26.1538461538462, Blast_Score=166, Evalue=6e-41,
Organism=Saccharomyces cerevisiae, GI6320826, Length=689, Percent_Identity=24.2380261248186, Blast_Score=168, Evalue=4e-42,
Organism=Drosophila melanogaster, GI28573410, Length=618, Percent_Identity=27.831715210356, Blast_Score=194, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 84344; Mature: 84344

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNALSVDVISIKDG
CCCCCCEEEECCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCC
RKVASLDKVNEQGLFAGTLGRRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFG
CEEHHHHHCCCCCEEEHHHHHHHHHHHEEEEECCCEEEEEECCCHHHHHHCCCCCEEEEE
EGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVGDFNHWDDTRHVMRQHLANGL
CCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
WELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
HHHHCHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHH
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPI
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEEC
SEFPFDGSWGYQPVGLYAPTHRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLV
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCEE
RFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSNACYWLREFHFDGLRLDAVSS
EECCEEEECCCCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHE
MLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCC
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVV
CCCCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEE
HGKGSLLHKIPGDDWQKFATLRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLL
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE
AYEPHQGVQRWLKDLNQLYQDMPALSVQDYEGAGFSWLDCENSRDSIFTFVRYGLAGDAP
EECCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCCCC
LVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
EEEEEECCCCCCCCEEECCCCCCCHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCCC
ALITVPPLGCLVIGPATGLAEAN
EEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MMTQANAYFYDGADVALLNGQYTDVFSLLGMHSANEGKALIVRCFLRNALSVDVISIKDG
CCCCCCEEEECCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCC
RKVASLDKVNEQGLFAGTLGRRVKPFLYLLRVEYPLCQLDIVDPYQFDSLLNSDDIYLFG
CEEHHHHHCCCCCEEEHHHHHHHHHHHEEEEECCCEEEEEECCCHHHHHHCCCCCEEEEE
EGSAERAYEFLGANWRQTQGVEGVHFCVWAPNAKRVSVVGDFNHWDDTRHVMRQHLANGL
CCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
WELFLPNVVEGAHYKFDLVYQNGERHTKSDPMATQMECAPHNASIVPPKAHHSWNDTAWM
HHHHCHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHH
SKRAATAWHKAPMSAYEVHLGSWRRKGEQGEQYLDYQDLIEQLIPYVKEQGFTHIELMPI
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEEC
SEFPFDGSWGYQPVGLYAPTHRFGDANGLKAFVDACHQAGIGIILDWVSAHFPKDPHGLV
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCEE
RFDGTCLYEHEDPRKGTHPDWDTLIYNYDRGEVRSFLLSNACYWLREFHFDGLRLDAVSS
EECCEEEECCCCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHE
MLYLDYSREPGQWLPNAYGGRENLEAISFLQILNQRLYQAFPGICMIAEESTAFAGVTKP
EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCC
TDQQGLGFGFKWNMGWMNDSLSYLGRDPLYRQFHHHQLTFSLMYAYTEQFMLSVSHDEVV
CCCCCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEE
HGKGSLLHKIPGDDWQKFATLRAYYGFMWGHPGKKLLFMGCEFGQRNEWNHNQSLDWHLL
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE
AYEPHQGVQRWLKDLNQLYQDMPALSVQDYEGAGFSWLDCENSRDSIFTFVRYGLAGDAP
EECCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCCCC
LVFVINMTPQLHTGFRIGLPLAGDYREYLNSDSQIYGGSNQGNAGTVVAESLPWQGMAQS
EEEEEECCCCCCCCEEECCCCCCCHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCCC
ALITVPPLGCLVIGPATGLAEAN
EEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA