| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yfjG [H]
Identifier: 160874454
GI number: 160874454
Start: 1588385
End: 1588822
Strand: Direct
Name: yfjG [H]
Synonym: Sbal195_1335
Alternate gene names: 160874454
Gene position: 1588385-1588822 (Clockwise)
Preceding gene: 160874452
Following gene: 160874455
Centisome position: 29.7
GC content: 42.69
Gene sequence:
>438_bases ATGCCGCAAATTTCTCGAAGTGTGTTAGTCCGTTTTAGTGCGATGCAAATGTATGACTTAGTGAATGATGTCGAGTCGTA TAAGGAATTTTTACCCGGTTGTGTGGGTGGCAAAGTCTTAGAATTTGATGGTAAGACTATGCTGGCATCTGTGGATGTGA GTAAAGCGGGGATCCGTAAGACATTTACGACTCGCAACCAAGTGGTTCCCGGGAAGAGTATTGATTTAACATTGGAAAAT GGGCCCTTTAAGCATTTATTGGGGCAGTGGCGTTTTACTGAGCTGACTGAAGAAGCTTGCAAGGTAGAATTCGAACTGAG TTTTGAGTTTTCAAACTCGTTAGCCGATATGGCCTTTGGTAAAGTGTTTAATGATCTTATGGTATCAATGGTGACGGCGT TTACGAGTCGCGCTAAGGTGATTTACAGTGACAAATGA
Upstream 100 bases:
>100_bases TTGATTGCTTGCCTAAGTTGTTCATCGCGTGTGCGTTCTTTTCGTGCGTTTGAGTTTGCTAAGGTCGCTGTGAAGTCGTT AGTTAAGAGTGCTAAGTCCT
Downstream 100 bases:
>100_bases GACAGATAAGTTTGTAGTTGATGTGGTTTACGCCTTGCCTACTCAGCAAAAAGTAATTTCGGTGAATGTGAATCCCGGCA CGTCGGCGATTGAGGTAGTG
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPQISRSVLVRFSAMQMYDLVNDVESYKEFLPGCVGGKVLEFDGKTMLASVDVSKAGIRKTFTTRNQVVPGKSIDLTLEN GPFKHLLGQWRFTELTEEACKVEFELSFEFSNSLADMAFGKVFNDLMVSMVTAFTSRAKVIYSDK
Sequences:
>Translated_145_residues MPQISRSVLVRFSAMQMYDLVNDVESYKEFLPGCVGGKVLEFDGKTMLASVDVSKAGIRKTFTTRNQVVPGKSIDLTLEN GPFKHLLGQWRFTELTEEACKVEFELSFEFSNSLADMAFGKVFNDLMVSMVTAFTSRAKVIYSDK >Mature_144_residues PQISRSVLVRFSAMQMYDLVNDVESYKEFLPGCVGGKVLEFDGKTMLASVDVSKAGIRKTFTTRNQVVPGKSIDLTLENG PFKHLLGQWRFTELTEEACKVEFELSFEFSNSLADMAFGKVFNDLMVSMVTAFTSRAKVIYSDK
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=145, Percent_Identity=59.3103448275862, Blast_Score=188, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16287; Mature: 16156
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQISRSVLVRFSAMQMYDLVNDVESYKEFLPGCVGGKVLEFDGKTMLASVDVSKAGIRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCHHHHHH TFTTRNQVVPGKSIDLTLENGPFKHLLGQWRFTELTEEACKVEFELSFEFSNSLADMAFG HHCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHEEEEEEEEECCCHHHHHHHH KVFNDLMVSMVTAFTSRAKVIYSDK HHHHHHHHHHHHHHHHCCEEEEECC >Mature Secondary Structure PQISRSVLVRFSAMQMYDLVNDVESYKEFLPGCVGGKVLEFDGKTMLASVDVSKAGIRK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCHHHHHH TFTTRNQVVPGKSIDLTLENGPFKHLLGQWRFTELTEEACKVEFELSFEFSNSLADMAFG HHCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHEEEEEEEEECCCHHHHHHHH KVFNDLMVSMVTAFTSRAKVIYSDK HHHHHHHHHHHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7524073; 9205837; 9278503 [H]