| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874389
Identifier: 160874389
GI number: 160874389
Start: 1509145
End: 1509585
Strand: Direct
Name: 160874389
Synonym: Sbal195_1270
Alternate gene names: NA
Gene position: 1509145-1509585 (Clockwise)
Preceding gene: 160874388
Following gene: 160874391
Centisome position: 28.22
GC content: 45.35
Gene sequence:
>441_bases GTGGAAGACCGGCACCATAGTTTCAGCGTAAAAGCCTCCTTCGACCAACGACTCTCGTTGGTCGTTTTTATTTGTGTCTG TGCTAGCTCATTTCTGCTCTGGCCTCAAAGCGACAATCTCGCCTTATCCCTGCTTAAATATCTGTTTATCCTGCTAGTTT GTATTTTCTTGCTATCACAGTTGTGGCGACTGCAGCATTGGCGTTTAGATTTTGTGCTTAGTGATAAAGGCGTGGGACGT TTGTCAACGGGTGAGCACTTTCAGGTATTAAAGCGAACTTGGGTGACGCCCTTTGTTTGCTTGATGTACATCGAAGTGGA TACTCAGTTACGGCTCTTGATGGTTTGGGCGGATATGTTAGACGATACTGACTATCGGCATTTATGTCGGCTGTTGCTGC GGGCTAAAATAAAACAGACTAAACCTCATACCGAGATTTAG
Upstream 100 bases:
>100_bases ATCCGTTTGTTGGAATGTGAAGATCCCGAATTGTTTGCATGGTTTATGGGCCATGAAGTGTGCCCTGATGCTGAGCTCGC GCGTATGGTAGTGAAAGTCC
Downstream 100 bases:
>100_bases TCTGTTTTCAGCAAGCCAAATAAGAACCTAAGCCTATAAACACATAAGAACTTAAGCGGTTACTTTTCTGGTAATAAAAT TGTTGGGCGCGGCGCGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MEDRHHSFSVKASFDQRLSLVVFICVCASSFLLWPQSDNLALSLLKYLFILLVCIFLLSQLWRLQHWRLDFVLSDKGVGR LSTGEHFQVLKRTWVTPFVCLMYIEVDTQLRLLMVWADMLDDTDYRHLCRLLLRAKIKQTKPHTEI
Sequences:
>Translated_146_residues MEDRHHSFSVKASFDQRLSLVVFICVCASSFLLWPQSDNLALSLLKYLFILLVCIFLLSQLWRLQHWRLDFVLSDKGVGR LSTGEHFQVLKRTWVTPFVCLMYIEVDTQLRLLMVWADMLDDTDYRHLCRLLLRAKIKQTKPHTEI >Mature_146_residues MEDRHHSFSVKASFDQRLSLVVFICVCASSFLLWPQSDNLALSLLKYLFILLVCIFLLSQLWRLQHWRLDFVLSDKGVGR LSTGEHFQVLKRTWVTPFVCLMYIEVDTQLRLLMVWADMLDDTDYRHLCRLLLRAKIKQTKPHTEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17285; Mature: 17285
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDRHHSFSVKASFDQRLSLVVFICVCASSFLLWPQSDNLALSLLKYLFILLVCIFLLSQ CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH LWRLQHWRLDFVLSDKGVGRLSTGEHFQVLKRTWVTPFVCLMYIEVDTQLRLLMVWADML HHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DDTDYRHLCRLLLRAKIKQTKPHTEI CCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEDRHHSFSVKASFDQRLSLVVFICVCASSFLLWPQSDNLALSLLKYLFILLVCIFLLSQ CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH LWRLQHWRLDFVLSDKGVGRLSTGEHFQVLKRTWVTPFVCLMYIEVDTQLRLLMVWADML HHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH DDTDYRHLCRLLLRAKIKQTKPHTEI CCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA