| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is erpA [H]
Identifier: 160874360
GI number: 160874360
Start: 1478313
End: 1478663
Strand: Direct
Name: erpA [H]
Synonym: Sbal195_1241
Alternate gene names: 160874360
Gene position: 1478313-1478663 (Clockwise)
Preceding gene: 160874359
Following gene: 160874366
Centisome position: 27.65
GC content: 45.3
Gene sequence:
>351_bases ATGACTGATCAAGCTGATACAGCAATGCCAATCCAATTTACCGATGCGGCAGCCGCTAAGGTGAAAGGTTTGCTGGAAGA AGAGCAAAATCCTGCACTTAAGCTACGAGTCTATGTGACTGGTGGTGGTTGTTCTGGATTTCAGTACGGCTTTACCTTTG ATGAAAAGGTCAATGACGGCGATTTTACGATAGAAAAACAAGGCGTTCTTTTGGTTGTCGATCCTATGAGCCTACAATAT TTAGTCGGTGGTGAAGTGGATTACACTTCAGGACTCGAAGGTTCTCGCTTCTTCGTGAAAAACCCTAACGCAACCACGAC CTGTGGCTGTGGTGCCAGTTTCTCTGTATAA
Upstream 100 bases:
>100_bases CCTGAATTATTACAGGGTGAAAAAGAACCACGGGTAATACTTGAACAAAACAGTCAGGTAAAGGATAATTTGCCCCAGAA AACTGATGTAAGAGGTAGTA
Downstream 100 bases:
>100_bases AGACTGCTCACTTAGCGCTTTTAAGGTGTGAGGTGAGATCAAAAAAGCCGTCGCAATGACGGCTTTTTGTTGGGCAAAAT TCAGTATACTACGAACTTAA
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTDQADTAMPIQFTDAAAAKVKGLLEEEQNPALKLRVYVTGGGCSGFQYGFTFDEKVNDGDFTIEKQGVLLVVDPMSLQY LVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV
Sequences:
>Translated_116_residues MTDQADTAMPIQFTDAAAAKVKGLLEEEQNPALKLRVYVTGGGCSGFQYGFTFDEKVNDGDFTIEKQGVLLVVDPMSLQY LVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV >Mature_115_residues TDQADTAMPIQFTDAAAAKVKGLLEEEQNPALKLRVYVTGGGCSGFQYGFTFDEKVNDGDFTIEKQGVLLVVDPMSLQYL VGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=42.9906542056075, Blast_Score=78, Evalue=1e-15, Organism=Homo sapiens, GI52426768, Length=110, Percent_Identity=30.9090909090909, Blast_Score=62, Evalue=8e-11, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=77.4774774774775, Blast_Score=186, Evalue=3e-49, Organism=Escherichia coli, GI1788877, Length=110, Percent_Identity=40.9090909090909, Blast_Score=69, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71998452, Length=112, Percent_Identity=38.3928571428571, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI25146411, Length=110, Percent_Identity=32.7272727272727, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=33.0188679245283, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=34.9056603773585, Blast_Score=70, Evalue=9e-14, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=46.9879518072289, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24642263, Length=110, Percent_Identity=31.8181818181818, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12378; Mature: 12247
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQADTAMPIQFTDAAAAKVKGLLEEEQNPALKLRVYVTGGGCSGFQYGFTFDEKVNDG CCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCC DFTIEKQGVLLVVDPMSLQYLVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV CEEEECCCEEEEECCCCEEEEECCCEECCCCCCCCEEEEECCCCCEEECCCCCCCC >Mature Secondary Structure TDQADTAMPIQFTDAAAAKVKGLLEEEQNPALKLRVYVTGGGCSGFQYGFTFDEKVNDG CCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCC DFTIEKQGVLLVVDPMSLQYLVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV CEEEECCCEEEEECCCCEEEEECCCEECCCCCCCCEEEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA