| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874310
Identifier: 160874310
GI number: 160874310
Start: 1411372
End: 1412490
Strand: Direct
Name: 160874310
Synonym: Sbal195_1190
Alternate gene names: NA
Gene position: 1411372-1412490 (Clockwise)
Preceding gene: 160874309
Following gene: 160874311
Centisome position: 26.39
GC content: 50.76
Gene sequence:
>1119_bases ATGGCAACCTCCTACCATTTAAGCGATATCCTTCATCAGCACTTAGCCCACTATCAACAGCAGCATAAACTGACCGAACA GCAAGCCTTAGTCTGCCAGCATATTCAATTGTGTCGCACGCAAGCCTTAGGCTTACAGCAATGGCGTTGTGATACTTGCC AGTATGTGCAGCAGGTATTTTGCTCCTGTGGTGACCGGCATTGTCCTCGTTGTCAGGGAAGGCAGACGAAAGCGTGGATT GCAGCGCAGCAGGCGCAAGTCTTGCCTTGCCGCTATTTCCACTTGGTCTTTACCTTACCTCACGAGCTGAACATCTTGGC GCACTACGCTGCCAAGCCGTTATACAGCGCCCTGTTTGAGTCTGTGTGGCAGACGCTTGCGCAGTTTGGCATGAAACGGA AACACCTTCAGGGTCAATTGGGTTGCACTATGGTGCTGCATACGTGGGGGCAAACCTTGAGTCAACATATCCACTTGCAT TGCTTAATTCCAGGCGGGGTAGTGACATCAGAGGGGGATTGGCATGGCGTGAAAACGGATTATCTGTTTCCGGTGAAAGC CTTGTCTACCGTGTATCGGGCCAAGCTATTACGGGCACTGCGACAACGCCAATTGGCTATCCCGGCGGCTGAAACCTTAA TGGCAAAGCCGTGGTGTGTTTACAGCAAAGCGTGTCTGAGCCGCGCTGAAACGGTGGTGGAATACCTTGGGCGTTATACC CGTAAAGGCATGCTGCATGAATCAAGAATTGCCGAAGTGACCGTAGAGCATGTCAGTTTTCGCTACAAGGACTATCGTGA CGGTCAGCAGCATAAGCAAATGCGGCTAAGCTGTGATGAGTTTATCCGCCGTTACTTATTGCATGTGTTGCCCAAAGGGC TGATGCGAGTGAGACATTTTGGTTTTCTCGCCAATGCTTGCCGCCGCAAAAAGCTGGCGCTCATCCAGCGGCAATTACGT AAGCCGCAGGTGGTATTGGCGAGTCCTTTGGTTAAGGAGGACTGTTGGTGGTCATGTCCGCAATGCCAGTTAGGTCATTT GCAGTTTATTGGGCTGATAAGACTGCAGAGATTAGTGATGTTTAACAACCAAAGTCAGCCAGTACGTCTGTCAGGATAA
Upstream 100 bases:
>100_bases TTGGTCATCACAGTATAAAGTCTACCGAGCGCTACTTGCATTGGTCGCCGGAATTAGGTCATCAAGGCTGTGACTTGCTA GCAAGTCTTGGGGGGATGCC
Downstream 100 bases:
>100_bases CCACTCCCTCAAGACGTAGCGTAACCGACAGCGAAAAGCAACCAGCCTTATGGGCACAAGCCGATGAGGGGATGTGGTGT GAGAGTGAGCCTGAGTCTGG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MATSYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQLCRTQALGLQQWRCDTCQYVQQVFCSCGDRHCPRCQGRQTKAWI AAQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLH CLIPGGVVTSEGDWHGVKTDYLFPVKALSTVYRAKLLRALRQRQLAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYT RKGMLHESRIAEVTVEHVSFRYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQRQLR KPQVVLASPLVKEDCWWSCPQCQLGHLQFIGLIRLQRLVMFNNQSQPVRLSG
Sequences:
>Translated_372_residues MATSYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQLCRTQALGLQQWRCDTCQYVQQVFCSCGDRHCPRCQGRQTKAWI AAQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLH CLIPGGVVTSEGDWHGVKTDYLFPVKALSTVYRAKLLRALRQRQLAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYT RKGMLHESRIAEVTVEHVSFRYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQRQLR KPQVVLASPLVKEDCWWSCPQCQLGHLQFIGLIRLQRLVMFNNQSQPVRLSG >Mature_371_residues ATSYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQLCRTQALGLQQWRCDTCQYVQQVFCSCGDRHCPRCQGRQTKAWIA AQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFESVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHC LIPGGVVTSEGDWHGVKTDYLFPVKALSTVYRAKLLRALRQRQLAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYTR KGMLHESRIAEVTVEHVSFRYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHFGFLANACRRKKLALIQRQLRK PQVVLASPLVKEDCWWSCPQCQLGHLQFIGLIRLQRLVMFNNQSQPVRLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007069 [H]
Pfam domain/function: PF04986 Transposase_32 [H]
EC number: NA
Molecular weight: Translated: 43203; Mature: 43072
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQLCRTQALGLQQWRCDTCQYVQQVF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHH CSCGDRHCPRCQGRQTKAWIAAQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFE HHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHCLIPGGVVTSEGDWHGVKTD HHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCEEECCCCCCCCCCC YLFPVKALSTVYRAKLLRALRQRQLAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYT CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RKGMLHESRIAEVTVEHVSFRYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHF HCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFLANACRRKKLALIQRQLRKPQVVLASPLVKEDCWWSCPQCQLGHLQFIGLIRLQRLVM HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH FNNQSQPVRLSG HCCCCCCEECCC >Mature Secondary Structure ATSYHLSDILHQHLAHYQQQHKLTEQQALVCQHIQLCRTQALGLQQWRCDTCQYVQQVF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHH CSCGDRHCPRCQGRQTKAWIAAQQAQVLPCRYFHLVFTLPHELNILAHYAAKPLYSALFE HHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SVWQTLAQFGMKRKHLQGQLGCTMVLHTWGQTLSQHIHLHCLIPGGVVTSEGDWHGVKTD HHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCEEECCCCCCCCCCC YLFPVKALSTVYRAKLLRALRQRQLAIPAAETLMAKPWCVYSKACLSRAETVVEYLGRYT CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RKGMLHESRIAEVTVEHVSFRYKDYRDGQQHKQMRLSCDEFIRRYLLHVLPKGLMRVRHF HCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFLANACRRKKLALIQRQLRKPQVVLASPLVKEDCWWSCPQCQLGHLQFIGLIRLQRLVM HHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH FNNQSQPVRLSG HCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]