| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is glmS [H]
Identifier: 160874299
GI number: 160874299
Start: 1398496
End: 1399494
Strand: Direct
Name: glmS [H]
Synonym: Sbal195_1179
Alternate gene names: 160874299
Gene position: 1398496-1399494 (Clockwise)
Preceding gene: 160874298
Following gene: 160874300
Centisome position: 26.15
GC content: 49.45
Gene sequence:
>999_bases ATGACAAACACTATTATGGAGCAAGAAGCTCGCACCGCACCGCAAAAAATCGCTGGCCAGTTAGAAGCTAACGCTGAAAT CATGCAGCAGTTAGGTGAGAAACTGCGCGCCTTCGATCCCCGTTTTGTAATGATAGTTGGTCGTGGTTCATCGGATCATG CGGGTGTTTTTGCTAAGTACTTATTTGAAATCGAAGCGGGCGTACCGACGTTTGCCGCCGCCCCTTCAGTGGCGAGTGTG TATGGTAAGACCTTGAAACTCGAAGGCGCATTAGTGATTGTTATTTCACAATCTGGCCGTAGCCCTGATATTTTGGCGCA GGCGCGTATGGCAAAAAATGCTGGCGCTTTTTGTGTTGCCTTAGTCAATGATGAAACCGCACCGATTAAAGATATCGTCG ATGTTGTTGTGCCTTTACGTGCCGGCGAAGAAAAAGCGGTTGCCGCGACTAAGAGTTACCTCGCAACGTTGTCAGCGATT TTACAGCTTGCCGCCGCTTGGACTCAAAGCGAATCGCTTGCTAGCGCCGTCGCTTCTTTACCCCAAGCGCTGCAAACGGC GGTGGACGCTGAGCCACAACTCACGCCAGAATCCGTTGCCGACGTGAAGAACTTAGTCGTACTTGGCCGTGGTTTAGGTT ATGCGGTATCTAAGGAAATTGCGCTTAAGTTAAAAGAAGTGTGTTCAATCCATGCTGAAGCGTTCAGCAGCGCCGAGTTC CTCCACGGTCCTGTGACCTTAGTTGAGAAAAAACTCACTATCGTTGATGTGTGCATTGGCGATGAATCCTACGCTAGCCA TATCGAACAGATTGAAAATGTGAGCCAACGCGGCGCCGATTTAGTGCATCTGAATCAAACCTCGACTGACATTCATCCAC GTGTTGCTCCGTTAGCATTATTACAACGATTCTATATCGATGTGGCTGCGGTTGCGATTGCCCGCGGTATCGATCCCGAT CAACCTGCTGGCCTTAAAAAAGTGACGCAAACGCTCTAA
Upstream 100 bases:
>100_bases TCGGTGCTATGTATTTCGCCCAGCAAGAATTTAATAAGTCGTTGTCAGTGCAAATAGGCACTGAAGCCAAATCCTGTATT TGAACGTGAAGGTAAAAGAC
Downstream 100 bases:
>100_bases GTTACCGAGCTTTAAGCGGCCAACGTTTTAGAGGTTTAGGTACTGCGGATTAGACTTAGTGGACTTTTAGCTGCACGATT AAGTCGCTGCACGATTAAAC
Product: glutamine--fructose-6-phosphate transaminase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTNTIMEQEARTAPQKIAGQLEANAEIMQQLGEKLRAFDPRFVMIVGRGSSDHAGVFAKYLFEIEAGVPTFAAAPSVASV YGKTLKLEGALVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVVPLRAGEEKAVAATKSYLATLSAI LQLAAAWTQSESLASAVASLPQALQTAVDAEPQLTPESVADVKNLVVLGRGLGYAVSKEIALKLKEVCSIHAEAFSSAEF LHGPVTLVEKKLTIVDVCIGDESYASHIEQIENVSQRGADLVHLNQTSTDIHPRVAPLALLQRFYIDVAAVAIARGIDPD QPAGLKKVTQTL
Sequences:
>Translated_332_residues MTNTIMEQEARTAPQKIAGQLEANAEIMQQLGEKLRAFDPRFVMIVGRGSSDHAGVFAKYLFEIEAGVPTFAAAPSVASV YGKTLKLEGALVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVVPLRAGEEKAVAATKSYLATLSAI LQLAAAWTQSESLASAVASLPQALQTAVDAEPQLTPESVADVKNLVVLGRGLGYAVSKEIALKLKEVCSIHAEAFSSAEF LHGPVTLVEKKLTIVDVCIGDESYASHIEQIENVSQRGADLVHLNQTSTDIHPRVAPLALLQRFYIDVAAVAIARGIDPD QPAGLKKVTQTL >Mature_331_residues TNTIMEQEARTAPQKIAGQLEANAEIMQQLGEKLRAFDPRFVMIVGRGSSDHAGVFAKYLFEIEAGVPTFAAAPSVASVY GKTLKLEGALVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVVPLRAGEEKAVAATKSYLATLSAIL QLAAAWTQSESLASAVASLPQALQTAVDAEPQLTPESVADVKNLVVLGRGLGYAVSKEIALKLKEVCSIHAEAFSSAEFL HGPVTLVEKKLTIVDVCIGDESYASHIEQIENVSQRGADLVHLNQTSTDIHPRVAPLALLQRFYIDVAAVAIARGIDPDQ PAGLKKVTQTL
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=365, Percent_Identity=24.6575342465753, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI205277386, Length=317, Percent_Identity=26.1829652996845, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1790167, Length=310, Percent_Identity=29.6774193548387, Blast_Score=115, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17539970, Length=296, Percent_Identity=25.3378378378378, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17532899, Length=253, Percent_Identity=25.6916996047431, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17532897, Length=253, Percent_Identity=25.6916996047431, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322745, Length=335, Percent_Identity=24.4776119402985, Blast_Score=89, Evalue=9e-19, Organism=Drosophila melanogaster, GI21357745, Length=318, Percent_Identity=25.1572327044025, Blast_Score=95, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 35204; Mature: 35073
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTIMEQEARTAPQKIAGQLEANAEIMQQLGEKLRAFDPRFVMIVGRGSSDHAGVFAKY CCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH LFEIEAGVPTFAAAPSVASVYGKTLKLEGALVIVISQSGRSPDILAQARMAKNAGAFCVA HHHHHCCCCCHHCCCHHHHHHCCEEEECCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEE LVNDETAPIKDIVDVVVPLRAGEEKAVAATKSYLATLSAILQLAAAWTQSESLASAVASL EECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PQALQTAVDAEPQLTPESVADVKNLVVLGRGLGYAVSKEIALKLKEVCSIHAEAFSSAEF HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH LHGPVTLVEKKLTIVDVCIGDESYASHIEQIENVSQRGADLVHLNQTSTDIHPRVAPLAL HCCCHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH LQRFYIDVAAVAIARGIDPDQPAGLKKVTQTL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC >Mature Secondary Structure TNTIMEQEARTAPQKIAGQLEANAEIMQQLGEKLRAFDPRFVMIVGRGSSDHAGVFAKY CCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH LFEIEAGVPTFAAAPSVASVYGKTLKLEGALVIVISQSGRSPDILAQARMAKNAGAFCVA HHHHHCCCCCHHCCCHHHHHHCCEEEECCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEE LVNDETAPIKDIVDVVVPLRAGEEKAVAATKSYLATLSAILQLAAAWTQSESLASAVASL EECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PQALQTAVDAEPQLTPESVADVKNLVVLGRGLGYAVSKEIALKLKEVCSIHAEAFSSAEF HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH LHGPVTLVEKKLTIVDVCIGDESYASHIEQIENVSQRGADLVHLNQTSTDIHPRVAPLAL HCCCHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH LQRFYIDVAAVAIARGIDPDQPAGLKKVTQTL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]