| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874292
Identifier: 160874292
GI number: 160874292
Start: 1388168
End: 1389691
Strand: Direct
Name: 160874292
Synonym: Sbal195_1172
Alternate gene names: NA
Gene position: 1388168-1389691 (Clockwise)
Preceding gene: 160874291
Following gene: 160874293
Centisome position: 25.96
GC content: 37.66
Gene sequence:
>1524_bases ATGACAATAAAAACGATAGCGATTGTTGGTGGTGGGACATCTGGTTGGTTAGCCGCTAATCACATAGGGCGAGTTTTAAA GGATAATCCAGAGTTATCTATTACACTCATCGAATCACCTGCTATCCCTATTATTGGTGTAGGTGAGGGGACTGTCCCCT CGATTCGTAAATCATTATCTAGTTTTGGAATAAGTGAATCAGAATTTATAAATTCTTGTGATGTAACTTTTAAACAGTCA ATAAAATTTGTAAATTGGTTAGATAGAACTAAACACGGTAACAATAATTTTTATCATCACCTTTTTGATATGCCGAGTCT ATTTGGTGAGGATTTAACACCATATTGGTTAATTAATCCTAAGGAGCACTTTGCAGATTTAGTCTCGTCACAGCATGCCG TTTGTGAAGAAAATAAGGCTCCAAAATTCATAACAACTCCAGAGTATAGTGGAGTTACGGGTTATGCTTACCACCTTAAT GCCGCTAAGTTTGCCATGCTATTAGCTAAGAATGCGACTGAACGCTTTAACGTTGAACATGTTCACGCAACTGTGAATGA TGTTTCATTTGGTATAGATGGTTCAATTCACTCACTGTTGACAGACAAAGGCGAGCTAACTTTTGACTTTTACATTGATT GCAGTGGTTTCGAATCTATTTTTTTAGCAAAAAGGTTTGATGTACCATTTATCGATAAGTCACAACAACTCTTCGTTAAT ACAGCGTTAGTTACTCAAGTGCCCACACAGAATTTCGAAAAAATTCCTCCATTTACTATTGCTACTGCCCATAAGGCGGG ATGGATTTGGGATATCGCCCTTACACAAAGGCGCGGAACTGGATTCGTCTACTCAAATGATCATATGAGTAATGCTGAAG CTGAAGATAAATTTGACCAGTACTTAGGTGGTAAACTTGCAGAGCTTACACCTCGAAAAATCCCAATGAAAGTTGGCTAT CGTCAACAGTTTTGGGTAAAAAATTGCGTCGCATTAGGTTTAGCGCAAGGTTTTTTAGAACCGATAGAAGCAACATCTAT TTTACTCACGGACTTTTCTGCGCGATTTCTTGCAGAACGATTTCCTTCTGATAAAGATGATATTGATTATCTTGCTAAGC GTTTTAATGAAACAGTTTCTCAAGCGTGGGAGAGAGTCGTCGAATTTGCTAAGTTGCACTATTGCTTATCTGACAGATCT GACTCAGCTTTCTGGCGCGATAATCGTTCTGATAAAACAATCCCTGAGGGCTTAAAACAACGTCTTAAAATGTGGCGGAA TTTTATTCCAATCGCAGAGGATTTTCCTTCAAAGTTTGAAGTGTTCAACAGAGAAAATTATTTATATGTACTTTATGGTA TGAAGTATTTTACTCGCCCAACTTATAGCAATGCGGAAGTTGATAAACGCGTTGTTCAACATTTGGCTAAGATGAAGTTG TTAAAAAGTAAAATGATAAGTGAGTTGCCAGAACATAGAGAACTACTTGATAAAATCCGTCTCTACGGATTGCAATCCAT ATAG
Upstream 100 bases:
>100_bases GGCTTTTTATTATTTTCTATAAAATATTAAATTAAATGTGTTAATTTTCGTGATGTAAGAGATCAAATTATATATCCATG CTTAATTTTGGAATCATGCT
Downstream 100 bases:
>100_bases ATTTTTATGAATTGCATAAAAACATTAACAAGGAAAAAAAAGATGACAACACATTATGTCCCTTTGAATAATTCTATTCA TAGACACTTAAAAGTAAACA
Product: tryptophan halogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTIKTIAIVGGGTSGWLAANHIGRVLKDNPELSITLIESPAIPIIGVGEGTVPSIRKSLSSFGISESEFINSCDVTFKQS IKFVNWLDRTKHGNNNFYHHLFDMPSLFGEDLTPYWLINPKEHFADLVSSQHAVCEENKAPKFITTPEYSGVTGYAYHLN AAKFAMLLAKNATERFNVEHVHATVNDVSFGIDGSIHSLLTDKGELTFDFYIDCSGFESIFLAKRFDVPFIDKSQQLFVN TALVTQVPTQNFEKIPPFTIATAHKAGWIWDIALTQRRGTGFVYSNDHMSNAEAEDKFDQYLGGKLAELTPRKIPMKVGY RQQFWVKNCVALGLAQGFLEPIEATSILLTDFSARFLAERFPSDKDDIDYLAKRFNETVSQAWERVVEFAKLHYCLSDRS DSAFWRDNRSDKTIPEGLKQRLKMWRNFIPIAEDFPSKFEVFNRENYLYVLYGMKYFTRPTYSNAEVDKRVVQHLAKMKL LKSKMISELPEHRELLDKIRLYGLQSI
Sequences:
>Translated_507_residues MTIKTIAIVGGGTSGWLAANHIGRVLKDNPELSITLIESPAIPIIGVGEGTVPSIRKSLSSFGISESEFINSCDVTFKQS IKFVNWLDRTKHGNNNFYHHLFDMPSLFGEDLTPYWLINPKEHFADLVSSQHAVCEENKAPKFITTPEYSGVTGYAYHLN AAKFAMLLAKNATERFNVEHVHATVNDVSFGIDGSIHSLLTDKGELTFDFYIDCSGFESIFLAKRFDVPFIDKSQQLFVN TALVTQVPTQNFEKIPPFTIATAHKAGWIWDIALTQRRGTGFVYSNDHMSNAEAEDKFDQYLGGKLAELTPRKIPMKVGY RQQFWVKNCVALGLAQGFLEPIEATSILLTDFSARFLAERFPSDKDDIDYLAKRFNETVSQAWERVVEFAKLHYCLSDRS DSAFWRDNRSDKTIPEGLKQRLKMWRNFIPIAEDFPSKFEVFNRENYLYVLYGMKYFTRPTYSNAEVDKRVVQHLAKMKL LKSKMISELPEHRELLDKIRLYGLQSI >Mature_506_residues TIKTIAIVGGGTSGWLAANHIGRVLKDNPELSITLIESPAIPIIGVGEGTVPSIRKSLSSFGISESEFINSCDVTFKQSI KFVNWLDRTKHGNNNFYHHLFDMPSLFGEDLTPYWLINPKEHFADLVSSQHAVCEENKAPKFITTPEYSGVTGYAYHLNA AKFAMLLAKNATERFNVEHVHATVNDVSFGIDGSIHSLLTDKGELTFDFYIDCSGFESIFLAKRFDVPFIDKSQQLFVNT ALVTQVPTQNFEKIPPFTIATAHKAGWIWDIALTQRRGTGFVYSNDHMSNAEAEDKFDQYLGGKLAELTPRKIPMKVGYR QQFWVKNCVALGLAQGFLEPIEATSILLTDFSARFLAERFPSDKDDIDYLAKRFNETVSQAWERVVEFAKLHYCLSDRSD SAFWRDNRSDKTIPEGLKQRLKMWRNFIPIAEDFPSKFEVFNRENYLYVLYGMKYFTRPTYSNAEVDKRVVQHLAKMKLL KSKMISELPEHRELLDKIRLYGLQSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006905 [H]
Pfam domain/function: PF04820 Trp_halogenase [H]
EC number: NA
Molecular weight: Translated: 57832; Mature: 57700
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKTIAIVGGGTSGWLAANHIGRVLKDNPELSITLIESPAIPIIGVGEGTVPSIRKSLS CCEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHH SFGISESEFINSCDVTFKQSIKFVNWLDRTKHGNNNFYHHLFDMPSLFGEDLTPYWLINP HCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHCCCCCCEEEECC KEHFADLVSSQHAVCEENKAPKFITTPEYSGVTGYAYHLNAAKFAMLLAKNATERFNVEH HHHHHHHHHCCHHHHHCCCCCCEEECCCCCCCEEEEEEECHHHHHHHHHHCCHHHCCCEE VHATVNDVSFGIDGSIHSLLTDKGELTFDFYIDCSGFESIFLAKRFDVPFIDKSQQLFVN EEEEECCEEECCCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEE TALVTQVPTQNFEKIPPFTIATAHKAGWIWDIALTQRRGTGFVYSNDHMSNAEAEDKFDQ EHHHEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHH YLGGKLAELTPRKIPMKVGYRQQFWVKNCVALGLAQGFLEPIEATSILLTDFSARFLAER HHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHH FPSDKDDIDYLAKRFNETVSQAWERVVEFAKLHYCLSDRSDSAFWRDNRSDKTIPEGLKQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH RLKMWRNFIPIAEDFPSKFEVFNRENYLYVLYGMKYFTRPTYSNAEVDKRVVQHLAKMKL HHHHHHHCCCCHHCCCCHHHHCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHH LKSKMISELPEHRELLDKIRLYGLQSI HHHHHHHHCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TIKTIAIVGGGTSGWLAANHIGRVLKDNPELSITLIESPAIPIIGVGEGTVPSIRKSLS CEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHH SFGISESEFINSCDVTFKQSIKFVNWLDRTKHGNNNFYHHLFDMPSLFGEDLTPYWLINP HCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHCCCCCCEEEECC KEHFADLVSSQHAVCEENKAPKFITTPEYSGVTGYAYHLNAAKFAMLLAKNATERFNVEH HHHHHHHHHCCHHHHHCCCCCCEEECCCCCCCEEEEEEECHHHHHHHHHHCCHHHCCCEE VHATVNDVSFGIDGSIHSLLTDKGELTFDFYIDCSGFESIFLAKRFDVPFIDKSQQLFVN EEEEECCEEECCCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEE TALVTQVPTQNFEKIPPFTIATAHKAGWIWDIALTQRRGTGFVYSNDHMSNAEAEDKFDQ EHHHEECCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHH YLGGKLAELTPRKIPMKVGYRQQFWVKNCVALGLAQGFLEPIEATSILLTDFSARFLAER HHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHH FPSDKDDIDYLAKRFNETVSQAWERVVEFAKLHYCLSDRSDSAFWRDNRSDKTIPEGLKQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH RLKMWRNFIPIAEDFPSKFEVFNRENYLYVLYGMKYFTRPTYSNAEVDKRVVQHLAKMKL HHHHHHHCCCCHHCCCCHHHHCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHH LKSKMISELPEHRELLDKIRLYGLQSI HHHHHHHHCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]