Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160874233

Identifier: 160874233

GI number: 160874233

Start: 1312014

End: 1312637

Strand: Direct

Name: 160874233

Synonym: Sbal195_1113

Alternate gene names: NA

Gene position: 1312014-1312637 (Clockwise)

Preceding gene: 160874230

Following gene: 160874235

Centisome position: 24.54

GC content: 47.12

Gene sequence:

>624_bases
ATGAAAACCACTGATAAGATTATACAATTGCTCAAGTTGCATGGCCCGCTTACCGCTAAAACCTTAGCGGAGGAATTGGC
GTTAACGACTATGGGCGTACGTCAACATCTTCAAGCTTTGGAAGACGCAGGCGATGTGGACATCGAAGATAGAGTTGAAG
GTCGTGGTCGCCCAACGCGTTACTGGGGATTGACGGAACAGAGCCGCAGTCACTTTGCCGATCGCCATGAGGAATTGACG
GTGCAGCTAATTGATTCGGTGAAAATGATTTTTGGTGACCAAGGCTTAGATAAGCTTATCGACCACAGGGAGCAAAGTGC
GTTAGTTCAGTATCGTGCCGCTATGAAAGGGGTGACAGATATTCCGACACGTTTGGCCATCCTTGCGAAATTACGCTCGA
ATGAAGGTTATATGGCAACGATGGAACAGGTAGATGGCGTGTATTTTTTACTCGAAAATCATTGTCCAATCTGCGCCGCA
GCGACTAAGTGTTTAAACTTTTGCCGCTCAGAGTTACAACTTTTCCAGCAATTATTCGCCGATATCGCGGTGGTGAGTCG
CGAAGAACATATCATCGAAGGTGCACGCCGCTGTGCATATAAGATTGAGGCTATTCCTCATTAG

Upstream 100 bases:

>100_bases
TTTAACCTTGTAAAGGATAAAGTAAATAAAAAAGTTTATTTAATCTGTTAAAGCGGGACTGGATCGGAGATAATGCGCTG
GCTACCATCGGAGAGTTCAG

Downstream 100 bases:

>100_bases
TGGGACTTAAGTCGCTCAATTATGGCGCTTTATCTTTAGGATAAAACGCCACTGAGCGCCAACGCCATATATCAAGCGTT
AGTGCGCAGCTTAGAACTGA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein ArsR; ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; HTH Domain Family; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcription Regulator Protein; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; Transcription Regulator; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator; DeoR Family Transcriptional Regulator

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTRYWGLTEQSRSHFADRHEELT
VQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTDIPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAA
ATKCLNFCRSELQLFQQLFADIAVVSREEHIIEGARRCAYKIEAIPH

Sequences:

>Translated_207_residues
MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTRYWGLTEQSRSHFADRHEELT
VQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTDIPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAA
ATKCLNFCRSELQLFQQLFADIAVVSREEHIIEGARRCAYKIEAIPH
>Mature_207_residues
MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTRYWGLTEQSRSHFADRHEELT
VQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTDIPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAA
ATKCLNFCRSELQLFQQLFADIAVVSREEHIIEGARRCAYKIEAIPH

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23405; Mature: 23405

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCE
YWGLTEQSRSHFADRHEELTVQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTD
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
IPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAAATKCLNFCRSELQLFQQLFA
HHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DIAVVSREEHIIEGARRCAYKIEAIPH
HHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCE
YWGLTEQSRSHFADRHEELTVQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTD
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
IPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAAATKCLNFCRSELQLFQQLFA
HHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DIAVVSREEHIIEGARRCAYKIEAIPH
HHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA