| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874233
Identifier: 160874233
GI number: 160874233
Start: 1312014
End: 1312637
Strand: Direct
Name: 160874233
Synonym: Sbal195_1113
Alternate gene names: NA
Gene position: 1312014-1312637 (Clockwise)
Preceding gene: 160874230
Following gene: 160874235
Centisome position: 24.54
GC content: 47.12
Gene sequence:
>624_bases ATGAAAACCACTGATAAGATTATACAATTGCTCAAGTTGCATGGCCCGCTTACCGCTAAAACCTTAGCGGAGGAATTGGC GTTAACGACTATGGGCGTACGTCAACATCTTCAAGCTTTGGAAGACGCAGGCGATGTGGACATCGAAGATAGAGTTGAAG GTCGTGGTCGCCCAACGCGTTACTGGGGATTGACGGAACAGAGCCGCAGTCACTTTGCCGATCGCCATGAGGAATTGACG GTGCAGCTAATTGATTCGGTGAAAATGATTTTTGGTGACCAAGGCTTAGATAAGCTTATCGACCACAGGGAGCAAAGTGC GTTAGTTCAGTATCGTGCCGCTATGAAAGGGGTGACAGATATTCCGACACGTTTGGCCATCCTTGCGAAATTACGCTCGA ATGAAGGTTATATGGCAACGATGGAACAGGTAGATGGCGTGTATTTTTTACTCGAAAATCATTGTCCAATCTGCGCCGCA GCGACTAAGTGTTTAAACTTTTGCCGCTCAGAGTTACAACTTTTCCAGCAATTATTCGCCGATATCGCGGTGGTGAGTCG CGAAGAACATATCATCGAAGGTGCACGCCGCTGTGCATATAAGATTGAGGCTATTCCTCATTAG
Upstream 100 bases:
>100_bases TTTAACCTTGTAAAGGATAAAGTAAATAAAAAAGTTTATTTAATCTGTTAAAGCGGGACTGGATCGGAGATAATGCGCTG GCTACCATCGGAGAGTTCAG
Downstream 100 bases:
>100_bases TGGGACTTAAGTCGCTCAATTATGGCGCTTTATCTTTAGGATAAAACGCCACTGAGCGCCAACGCCATATATCAAGCGTT AGTGCGCAGCTTAGAACTGA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein ArsR; ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; HTH Domain Family; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcription Regulator Protein; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; Transcription Regulator; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator; DeoR Family Transcriptional Regulator
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTRYWGLTEQSRSHFADRHEELT VQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTDIPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAA ATKCLNFCRSELQLFQQLFADIAVVSREEHIIEGARRCAYKIEAIPH
Sequences:
>Translated_207_residues MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTRYWGLTEQSRSHFADRHEELT VQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTDIPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAA ATKCLNFCRSELQLFQQLFADIAVVSREEHIIEGARRCAYKIEAIPH >Mature_207_residues MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTRYWGLTEQSRSHFADRHEELT VQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTDIPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAA ATKCLNFCRSELQLFQQLFADIAVVSREEHIIEGARRCAYKIEAIPH
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23405; Mature: 23405
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCE YWGLTEQSRSHFADRHEELTVQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC IPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAAATKCLNFCRSELQLFQQLFA HHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH DIAVVSREEHIIEGARRCAYKIEAIPH HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTTDKIIQLLKLHGPLTAKTLAEELALTTMGVRQHLQALEDAGDVDIEDRVEGRGRPTR CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCE YWGLTEQSRSHFADRHEELTVQLIDSVKMIFGDQGLDKLIDHREQSALVQYRAAMKGVTD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC IPTRLAILAKLRSNEGYMATMEQVDGVYFLLENHCPICAAATKCLNFCRSELQLFQQLFA HHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH DIAVVSREEHIIEGARRCAYKIEAIPH HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA