| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874176
Identifier: 160874176
GI number: 160874176
Start: 1251267
End: 1251824
Strand: Direct
Name: 160874176
Synonym: Sbal195_1056
Alternate gene names: NA
Gene position: 1251267-1251824 (Clockwise)
Preceding gene: 160874175
Following gene: 160874177
Centisome position: 23.4
GC content: 49.1
Gene sequence:
>558_bases ATGAAGCCTGAAATGACCGAACAAGAACAACGTTTAAGAGACAAGCTTTTACCTGAGATAGAAGCCTTCAAACAGCAAAG GGAAACCTTGCAACTGGCCACGCTAGGTATTGATGGCCAGCCGAATGCGAGTTATGCACCCTTCGCACTGGCAGATGATG GTTTTTATATTCTAGTGAGTGACTTAGCCCGTCATGGTCATAACTTAAAGCACTCATCTAAGGTCTCTGTGATGCTTGTT GAAGATGAAACCGCCGCCAAATCGGTTTTTGCCCGCAAGCGTTTGACCTTCGATGCGATTGCCGAGGCCGTGCCCCGCGA TACGCCCGCCTTTATTAAGGGCGTTAGTGTGTTATCGGCCCGTTTTGGCGAAATGTCCGATAACCTTGCGGCATTAACCG ATTTTAACTTATACAAGCTCGCGCCCCATCAGGGTCTTTACGTGAAAGGTTTTGGCCAAGCATTTAGCCTGAGCGGCGCA GAGTTGTTAGATGTGGATTGGAAGCGCGATGGCCACCATGGCACGCCCAAAATACCGGAAAATCAGCAAGTCGCTTAA
Upstream 100 bases:
>100_bases AGCAAGTTCGCCAATTTAAAGCGCTCGCGACTGCCTTTGCGTCGGTGTAATCACACCTCTGAATTGCAGCATTAACGACA GTATTTAAGGAACACAGCAA
Downstream 100 bases:
>100_bases GTCGCGCTAAGCGATGGCAATAAAACCAACCCGCACTCGCTGCGGGTTTCTTTTATGCTTTCTTTTGAGTAAAACCACGC TTTGCCCTTGAATTTACCCG
Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVSDLARHGHNLKHSSKVSVMLV EDETAAKSVFARKRLTFDAIAEAVPRDTPAFIKGVSVLSARFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGA ELLDVDWKRDGHHGTPKIPENQQVA
Sequences:
>Translated_185_residues MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVSDLARHGHNLKHSSKVSVMLV EDETAAKSVFARKRLTFDAIAEAVPRDTPAFIKGVSVLSARFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGA ELLDVDWKRDGHHGTPKIPENQQVA >Mature_185_residues MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVSDLARHGHNLKHSSKVSVMLV EDETAAKSVFARKRLTFDAIAEAVPRDTPAFIKGVSVLSARFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGA ELLDVDWKRDGHHGTPKIPENQQVA
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019595 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR014419 [H]
Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 20481; Mature: 20481
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVS CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEECCCCEEEEH DLARHGHNLKHSSKVSVMLVEDETAAKSVFARKRLTFDAIAEAVPRDTPAFIKGVSVLSA HHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHH RFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGAELLDVDWKRDGHHGTPKIPE HHCCCCCCEEEEECCCEEEECCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCC NQQVA CCCCC >Mature Secondary Structure MKPEMTEQEQRLRDKLLPEIEAFKQQRETLQLATLGIDGQPNASYAPFALADDGFYILVS CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEECCCCEEEEH DLARHGHNLKHSSKVSVMLVEDETAAKSVFARKRLTFDAIAEAVPRDTPAFIKGVSVLSA HHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHH RFGEMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLSGAELLDVDWKRDGHHGTPKIPE HHCCCCCCEEEEECCCEEEECCCCCEEEEECCCEECCCCCEEEEECCCCCCCCCCCCCCC NQQVA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]