| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874162
Identifier: 160874162
GI number: 160874162
Start: 1238754
End: 1239185
Strand: Direct
Name: 160874162
Synonym: Sbal195_1042
Alternate gene names: NA
Gene position: 1238754-1239185 (Clockwise)
Preceding gene: 160874161
Following gene: 160874163
Centisome position: 23.17
GC content: 47.45
Gene sequence:
>432_bases ATGCGTACAGGTCAAATACTCTGGCCCACAGATTTTTCGGAAACTGCGGCCCATGCACTGAGTTATGCCATTGAAATGGC TAATCTATACCATGTAGGACTCAAAATTTTACACGTGGTTGAACAGCCGCTCGGTGATGAAAACTTTATGATTTTATCGA TCACTCCTGAAGAGCTGGCTAAGAGTATGGAGGAAGCGGCAGCAACCAAGATGCAGGCGCTGTTAGAAGGGTTAAACACT GAACTTTCCATCACGACCTTGATCCGCCGCGGCGATCCTGTGTATCAGATTTTAGAAGAGGCCAACAGTAAAGATATTGG CATGGTAGTGATAGCGAGCCATGGCCGAACTGGGATTTCGCATTTTTTACACACCAATGTCGCAGAAGCGGTAGCTAACG GTGCGGCTTGTCCTGTGCTGGTGGTGAAGTAA
Upstream 100 bases:
>100_bases CTGCTGAGGTCAGGTTTTTTGTTGATAATGGCGACGCCGTTGCTTGGTTAAAAGACTAGTTGCTCAGCAATCCATTCGCG CCATAGAAGGAGTACAGATT
Downstream 100 bases:
>100_bases GTGAGTTAGTGGCTTGACTCAATAAATCCAAAGGACGCTTATTGCGTCCTTTCTTTTTGATTGATAAAGAATAATTAATT GAAATGGGTACGCAAGAAGC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein Family; Stress Response Protein; Universal Stress Protein Usp; Uspa Domain-Containing Protein; Universal Stress Protein UspA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELAKSMEEAAATKMQALLEGLNT ELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGISHFLHTNVAEAVANGAACPVLVVK
Sequences:
>Translated_143_residues MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELAKSMEEAAATKMQALLEGLNT ELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGISHFLHTNVAEAVANGAACPVLVVK >Mature_143_residues MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELAKSMEEAAATKMQALLEGLNT ELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGISHFLHTNVAEAVANGAACPVLVVK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15511; Mature: 15511
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELA CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHH KSMEEAAATKMQALLEGLNTELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGIS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCHHHH HFLHTNVAEAVANGAACPVLVVK HHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELA CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHH KSMEEAAATKMQALLEGLNTELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGIS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCHHHH HFLHTNVAEAVANGAACPVLVVK HHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA