Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874142

Identifier: 160874142

GI number: 160874142

Start: 1217868

End: 1218251

Strand: Direct

Name: 160874142

Synonym: Sbal195_1022

Alternate gene names: NA

Gene position: 1217868-1218251 (Clockwise)

Preceding gene: 160874141

Following gene: 160874144

Centisome position: 22.78

GC content: 51.04

Gene sequence:

>384_bases
ATGAATACTTTACTTATTTGCCTATTTGTCGCCATGTTATTGCCGTATCTGGCGAAAGGCCCCGTCGCTTGGGCGATGGC
TAAGGCGGGTGGATACGATAATAATCATCCCCGTGCTCAGCAAGCACAGCTAACCGGTTTTGGTGCTCGCGCCTTGGCGG
GGCATCAAAATGCCTTCGAGTCCCTGTTAGTGTTTGGTCTGGCGGTATTAGTGGTAATCGCAACGGGCAAAGTGAACCCC
ACCGCTGAGTGGCTGGCAATTACCCATGTCGCCGCCCGCTTTGTGTATCACATCCTATACCTTGCCAATAAAGGCACCCT
ACGATCCCTCTCATGGTTTGTCGCTATCTTCAGCGCCTTCGGGATTTTCTTTCAAGCTTTTTAA

Upstream 100 bases:

>100_bases
CTAAAACAGCAGAGCTAAAACAGCAGAACTAAAACAGCAGAACTAAAACAGTAGAGCTTGAATAACAGAACTCGAACAAC
AATCAAAGGAAGCTTAACCT

Downstream 100 bases:

>100_bases
TGCTGGGTATTAAAGGACTTGGGCGAGTTTTTTAATATTTTCCCGCAGCTCATCGGGCGTATGGGCTGCATAACCCAGTA
AGATCGCTTGCCTTGGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP
TAEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAFGIFFQAF

Sequences:

>Translated_127_residues
MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP
TAEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAFGIFFQAF
>Mature_127_residues
MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFESLLVFGLAVLVVIATGKVNP
TAEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAFGIFFQAF

Specific function: Unknown

COG id: COG3686

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13801; Mature: 13801

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFE
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHCCHHHHH
SLLVFGLAVLVVIATGKVNPTAEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GIFFQAF
HHHHHCC
>Mature Secondary Structure
MNTLLICLFVAMLLPYLAKGPVAWAMAKAGGYDNNHPRAQQAQLTGFGARALAGHQNAFE
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHCCHHHHH
SLLVFGLAVLVVIATGKVNPTAEWLAITHVAARFVYHILYLANKGTLRSLSWFVAIFSAF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GIFFQAF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA