| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874107
Identifier: 160874107
GI number: 160874107
Start: 1171514
End: 1172395
Strand: Direct
Name: 160874107
Synonym: Sbal195_0987
Alternate gene names: NA
Gene position: 1171514-1172395 (Clockwise)
Preceding gene: 160874103
Following gene: 160874109
Centisome position: 21.91
GC content: 46.6
Gene sequence:
>882_bases ATGCAGTTTAATCCTCTGGCTGATTTGATTATCAAGCTAGAAACGATATTTCAGGAGTCAAAAGTGAACTATCTCAACTC AGCATTAGTGTGTTTAGCCCTGTGCTTATCGAGTGCACTGCAGGCCGAAGAGCAAACTCAGTGGCATTACAGCTTAGGCA GTCATGATTTTGTGGTCGAGGATTCTCACACCTTAGGGGTGAATGCGAGTCTATTGTTAGAATATAAAACCCAAAGCGAT ATTTTGCTGACGGCGGCGCTGGATGCCTATATAGACGTAGATGTCGATAAACTCGACCCTGACCACATCCCTGTGTGGTT TAAGTCTGCCTATGCTGCGAGTGGTGAGTTGTATCGTATTAACCCCGAATTTTCATTGGGTTGGCAGTTCGATTTACAGG GAAAGCGTAATACTGTTAGCTCGGTGGAGAAACAAGCTAAGGTATTTCCTGGGTTGACGGCTAGCTTTGACGGACAAGAA TTACAGGCCCAGTTGAAGGCGGGGGCAGGTTATTACTATCTCGAAATCGATGACGATGTGCCTAGAACCCGAGGTTACGA TCGTGGCGATTTTGGCAACGGTACCTTTGCTTATACCTTTATGGGAAGTGTCGGGGCTAATGTGACGCCTAAGCTACATA TGCAAGTGGCCGCACAAACCTGGCAAGACGAGGGCAAATGGTTAGAGAATCAATATCGCTTTGAGCTGAGTTACCAAACC GATTTTTGGCGGCCTAACAGCATGCTCGTGTTGAGCGCCGAGCACACGCAATACAATTTAGACCACTATGCCAAAGTCGA TATTAACTCGGCTGAGTATTTGCCTATTCTGCCATGGGATAGCGATACGCTAGTGCGTTTGAGCTTAGTGATCCCTTGGT AA
Upstream 100 bases:
>100_bases GAGAGTGTCATAATTTGAACTATCGCCTATTATTCTTTGATTAAATTGGCTAGTTTAGCCGCTCTTTAACGGCAACCTTA GTTGGTGTTATTCCTATTTT
Downstream 100 bases:
>100_bases CATAGTGTCACTTATGAGTTAAGTGCTTCTCGACTAAAGCGATCATGGCTTGAGCTGCAAAGGACAATACTTGGTCTTTG CGCCAAAAGAGCGATAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MQFNPLADLIIKLETIFQESKVNYLNSALVCLALCLSSALQAEEQTQWHYSLGSHDFVVEDSHTLGVNASLLLEYKTQSD ILLTAALDAYIDVDVDKLDPDHIPVWFKSAYAASGELYRINPEFSLGWQFDLQGKRNTVSSVEKQAKVFPGLTASFDGQE LQAQLKAGAGYYYLEIDDDVPRTRGYDRGDFGNGTFAYTFMGSVGANVTPKLHMQVAAQTWQDEGKWLENQYRFELSYQT DFWRPNSMLVLSAEHTQYNLDHYAKVDINSAEYLPILPWDSDTLVRLSLVIPW
Sequences:
>Translated_293_residues MQFNPLADLIIKLETIFQESKVNYLNSALVCLALCLSSALQAEEQTQWHYSLGSHDFVVEDSHTLGVNASLLLEYKTQSD ILLTAALDAYIDVDVDKLDPDHIPVWFKSAYAASGELYRINPEFSLGWQFDLQGKRNTVSSVEKQAKVFPGLTASFDGQE LQAQLKAGAGYYYLEIDDDVPRTRGYDRGDFGNGTFAYTFMGSVGANVTPKLHMQVAAQTWQDEGKWLENQYRFELSYQT DFWRPNSMLVLSAEHTQYNLDHYAKVDINSAEYLPILPWDSDTLVRLSLVIPW >Mature_293_residues MQFNPLADLIIKLETIFQESKVNYLNSALVCLALCLSSALQAEEQTQWHYSLGSHDFVVEDSHTLGVNASLLLEYKTQSD ILLTAALDAYIDVDVDKLDPDHIPVWFKSAYAASGELYRINPEFSLGWQFDLQGKRNTVSSVEKQAKVFPGLTASFDGQE LQAQLKAGAGYYYLEIDDDVPRTRGYDRGDFGNGTFAYTFMGSVGANVTPKLHMQVAAQTWQDEGKWLENQYRFELSYQT DFWRPNSMLVLSAEHTQYNLDHYAKVDINSAEYLPILPWDSDTLVRLSLVIPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33220; Mature: 33220
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFNPLADLIIKLETIFQESKVNYLNSALVCLALCLSSALQAEEQTQWHYSLGSHDFVVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEECCCCEEEEE DSHTLGVNASLLLEYKTQSDILLTAALDAYIDVDVDKLDPDHIPVWFKSAYAASGELYRI CCCEECCCEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCEEEEE NPEFSLGWQFDLQGKRNTVSSVEKQAKVFPGLTASFDGQELQAQLKAGAGYYYLEIDDDV CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCC PRTRGYDRGDFGNGTFAYTFMGSVGANVTPKLHMQVAAQTWQDEGKWLENQYRFELSYQT CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHHHCCCCCEECCEEEEEEEECC DFWRPNSMLVLSAEHTQYNLDHYAKVDINSAEYLPILPWDSDTLVRLSLVIPW CCCCCCCEEEEEECCCEECCCCEEEEECCCCCEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MQFNPLADLIIKLETIFQESKVNYLNSALVCLALCLSSALQAEEQTQWHYSLGSHDFVVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEECCCCEEEEE DSHTLGVNASLLLEYKTQSDILLTAALDAYIDVDVDKLDPDHIPVWFKSAYAASGELYRI CCCEECCCEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCEEEEE NPEFSLGWQFDLQGKRNTVSSVEKQAKVFPGLTASFDGQELQAQLKAGAGYYYLEIDDDV CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCC PRTRGYDRGDFGNGTFAYTFMGSVGANVTPKLHMQVAAQTWQDEGKWLENQYRFELSYQT CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHHHCCCCCEECCEEEEEEEECC DFWRPNSMLVLSAEHTQYNLDHYAKVDINSAEYLPILPWDSDTLVRLSLVIPW CCCCCCCEEEEEECCCEECCCCEEEEECCCCCEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA