| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is cysJ [H]
Identifier: 160874073
GI number: 160874073
Start: 1128318
End: 1130117
Strand: Direct
Name: cysJ [H]
Synonym: Sbal195_0953
Alternate gene names: 160874073
Gene position: 1128318-1130117 (Clockwise)
Preceding gene: 160874070
Following gene: 160874074
Centisome position: 21.1
GC content: 49.22
Gene sequence:
>1800_bases ATGTTGTTAAAAGAACTTTCATCGCTGGCTTCGCCATTGTCTCAAGGACAAGTCGAGAAGCTAAAACAACTCACTTCTGA GTTAAGTGCTGTGCAACTGGCTTGGGTGAGTGGCTATCTTGCTGCCACCGCCAATGCTGGCCAACTAGCTCCCGCCACCG AAGCGCAAACTGCTCAAACAGTGACGATTCTTTATGGCAGTCAAACGGGTAATGGCCGTGGTGTCGCCAAAGCGCTCGCC GATAAAGCACAGGCGCAAGGTTATGCGGTCAATCTGGCTTCAATGGGCGAATACAATGTTCGCCAACTGAAACAAGAAAC TGTGCTCTTGCTGGTTGTCAGCACCCATGGTGAAGGTGAAGCGCCGGATGACGCGATTGAATTACATAAGTTTTTAGCAT CGAAACGTGCGCCTAAGTTAGACAATCTACATTACTCAGTACTTGCGCTGGGGGATTCAAGTTATGAATTCTTCTGCCAA ACCGGTAAAGACTTTAGTACTCGTTTAGCGCTACTGGGTGCTAAGTCATTGTTACCTTTGGTTGAATGTGATGTGGACTA TGAAGCTGCCGCCGGTCAGTGGCACGCCGATGTATTAGAGGCCGTTAAGCCGCTTATCGAAACCTCGTCCGCCAGTGTGG TATCTATCGGTACCGCTAAAACGATTGGCGAAAGCGAGTTTACTAAGCAAAACCCCTATAGCGCTGAAGTGCTAGCGAGC CAAAAAATTACCGGCCGCGGTTCAGACCGAGATGTGCGCCACGTTGAAATTGACCTTGGCGACTCAGGCTTAAGCTATCA AGCGGGCGATGCCCTCGGTGTGTGGTTTAGCAATAATGAAGTGTTAGTCGATGAAGTCCTCGTGGGTCTGTCGTTGGCCG CCGATGAGTTAGTGACCCTAGGCACAGAATCTTTGACCCTTAAGCAAGCTTTGCTTGAGAAGAAAGAGCTGACTCAGTTG TATCCTGGATTAGTCAAAGCGTGGGCCGAACTGAGCGGCAGCGCTAAACTGCTGGCATTGAGCGAAGATAAAGAACAAGT GCGTCACTTTATCCTTAAGCATCAATTTGCGGATTTAGTCGCCCAGTATCCGTTAACAAATAGCGCTGTCACGTTAAGCG CGGCAAGATTGCTTGAGTTACTGCGCCCATTAACCCCAAGACTTTACTCTATCGCCTCAAGCCAAAGTGAAGTGGAAACC GAAGTCCATTTAACCGTGGCGTTAGTGGAAGATGAGCGTCACGGCGCGGCCCGTTTTGGCGGAGCGTCACACTTCTTAGC CTCTGCGCAGGAAGGCACTCAGGTTAAGGTTTATGTTGAGTCGAATAAGCATTTCCGTTTACCTGATAATCCAGACACGC CAGTGATTATGGTTGGCCCAGGCACAGGTGTTGCGCCATTCCGTGCCTTTATGCAGGAGCGCGTGGCCCAAGGTATTCAA GGTGATAGCTGGTTATTCTTCGGCAATCCACACTTTGAGCAGGATTTCTTGTATCAAACTGAGTGGCAACAGTATTTGAA AAATGGCGATTTAAGCCGTATCGACGTGGCGTTCTCGCGCGATCAAGCCCATAAAGTTTATGTGCAGCACCGTATTAAAG AACAAGGCCAAGCCCTGTGGCAATGGTTGCAAAACGGCGCGCATCTGTACATTTGTGGTGATGCTGAACGTATGGCCAAA GATGTTCACCAAGCCTTGATTGAGGTGGCTGTCGAAGTCGGTGGTTTGAATAACGAAGCGGCTGAAGCCTACTTTGAAAC ACTGCGCAGCGATAAACGTTACCAAAAAGACGTGTATTAA
Upstream 100 bases:
>100_bases TGTATATTCCAAAATGGAATTAAAAATCCGATTTTATTCTTTTTTGCTTTTCTTAAACCGCGATAAGCTTGTGGACATTA CACTGTCATAGGGCCGTCTC
Downstream 100 bases:
>100_bases TCTCAACCGTTGCGCATATAAGAAACGCATAAAAATAGCCAAAGCTGCACACGTGATGACCTGTGCAGTCAGCGAACCGA ATTTGAAGAGGCAGTTGCCA
Product: sulfite reductase (NADPH) flavoprotein subunit alpha
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MLLKELSSLASPLSQGQVEKLKQLTSELSAVQLAWVSGYLAATANAGQLAPATEAQTAQTVTILYGSQTGNGRGVAKALA DKAQAQGYAVNLASMGEYNVRQLKQETVLLLVVSTHGEGEAPDDAIELHKFLASKRAPKLDNLHYSVLALGDSSYEFFCQ TGKDFSTRLALLGAKSLLPLVECDVDYEAAAGQWHADVLEAVKPLIETSSASVVSIGTAKTIGESEFTKQNPYSAEVLAS QKITGRGSDRDVRHVEIDLGDSGLSYQAGDALGVWFSNNEVLVDEVLVGLSLAADELVTLGTESLTLKQALLEKKELTQL YPGLVKAWAELSGSAKLLALSEDKEQVRHFILKHQFADLVAQYPLTNSAVTLSAARLLELLRPLTPRLYSIASSQSEVET EVHLTVALVEDERHGAARFGGASHFLASAQEGTQVKVYVESNKHFRLPDNPDTPVIMVGPGTGVAPFRAFMQERVAQGIQ GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLSRIDVAFSRDQAHKVYVQHRIKEQGQALWQWLQNGAHLYICGDAERMAK DVHQALIEVAVEVGGLNNEAAEAYFETLRSDKRYQKDVY
Sequences:
>Translated_599_residues MLLKELSSLASPLSQGQVEKLKQLTSELSAVQLAWVSGYLAATANAGQLAPATEAQTAQTVTILYGSQTGNGRGVAKALA DKAQAQGYAVNLASMGEYNVRQLKQETVLLLVVSTHGEGEAPDDAIELHKFLASKRAPKLDNLHYSVLALGDSSYEFFCQ TGKDFSTRLALLGAKSLLPLVECDVDYEAAAGQWHADVLEAVKPLIETSSASVVSIGTAKTIGESEFTKQNPYSAEVLAS QKITGRGSDRDVRHVEIDLGDSGLSYQAGDALGVWFSNNEVLVDEVLVGLSLAADELVTLGTESLTLKQALLEKKELTQL YPGLVKAWAELSGSAKLLALSEDKEQVRHFILKHQFADLVAQYPLTNSAVTLSAARLLELLRPLTPRLYSIASSQSEVET EVHLTVALVEDERHGAARFGGASHFLASAQEGTQVKVYVESNKHFRLPDNPDTPVIMVGPGTGVAPFRAFMQERVAQGIQ GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLSRIDVAFSRDQAHKVYVQHRIKEQGQALWQWLQNGAHLYICGDAERMAK DVHQALIEVAVEVGGLNNEAAEAYFETLRSDKRYQKDVY >Mature_599_residues MLLKELSSLASPLSQGQVEKLKQLTSELSAVQLAWVSGYLAATANAGQLAPATEAQTAQTVTILYGSQTGNGRGVAKALA DKAQAQGYAVNLASMGEYNVRQLKQETVLLLVVSTHGEGEAPDDAIELHKFLASKRAPKLDNLHYSVLALGDSSYEFFCQ TGKDFSTRLALLGAKSLLPLVECDVDYEAAAGQWHADVLEAVKPLIETSSASVVSIGTAKTIGESEFTKQNPYSAEVLAS QKITGRGSDRDVRHVEIDLGDSGLSYQAGDALGVWFSNNEVLVDEVLVGLSLAADELVTLGTESLTLKQALLEKKELTQL YPGLVKAWAELSGSAKLLALSEDKEQVRHFILKHQFADLVAQYPLTNSAVTLSAARLLELLRPLTPRLYSIASSQSEVET EVHLTVALVEDERHGAARFGGASHFLASAQEGTQVKVYVESNKHFRLPDNPDTPVIMVGPGTGVAPFRAFMQERVAQGIQ GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLSRIDVAFSRDQAHKVYVQHRIKEQGQALWQWLQNGAHLYICGDAERMAK DVHQALIEVAVEVGGLNNEAAEAYFETLRSDKRYQKDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI7657393, Length=592, Percent_Identity=31.5878378378378, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI221316709, Length=592, Percent_Identity=31.5878378378378, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI221316705, Length=603, Percent_Identity=31.1774461028192, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI127139033, Length=617, Percent_Identity=30.9562398703404, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI221316707, Length=522, Percent_Identity=31.992337164751, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI24041029, Length=598, Percent_Identity=29.4314381270903, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI10835173, Length=646, Percent_Identity=27.7089783281734, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI40254422, Length=647, Percent_Identity=27.047913446677, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI169790956, Length=410, Percent_Identity=30.7317073170732, Blast_Score=159, Evalue=9e-39, Organism=Homo sapiens, GI169790958, Length=410, Percent_Identity=30.7317073170732, Blast_Score=159, Evalue=1e-38, Organism=Escherichia coli, GI1789123, Length=593, Percent_Identity=51.0961214165261, Blast_Score=600, Evalue=1e-172, Organism=Caenorhabditis elegans, GI17554134, Length=596, Percent_Identity=29.8657718120805, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17566446, Length=579, Percent_Identity=28.3246977547496, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17531441, Length=415, Percent_Identity=24.8192771084337, Blast_Score=95, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321832, Length=648, Percent_Identity=30.5555555555556, Blast_Score=216, Evalue=6e-57, Organism=Saccharomyces cerevisiae, GI6321143, Length=392, Percent_Identity=31.1224489795918, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6325305, Length=635, Percent_Identity=23.1496062992126, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6322597, Length=160, Percent_Identity=30.625, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17137192, Length=615, Percent_Identity=29.1056910569106, Blast_Score=224, Evalue=2e-58, Organism=Drosophila melanogaster, GI24582192, Length=524, Percent_Identity=29.3893129770992, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI24660907, Length=596, Percent_Identity=27.6845637583893, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24660903, Length=596, Percent_Identity=27.6845637583893, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI78706872, Length=535, Percent_Identity=27.8504672897196, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24583543, Length=535, Percent_Identity=27.8504672897196, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI78706876, Length=535, Percent_Identity=27.8504672897196, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24647438, Length=236, Percent_Identity=27.1186440677966, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 65451; Mature: 65451
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKELSSLASPLSQGQVEKLKQLTSELSAVQLAWVSGYLAATANAGQLAPATEAQTAQT CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE VTILYGSQTGNGRGVAKALADKAQAQGYAVNLASMGEYNVRQLKQETVLLLVVSTHGEGE EEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHCCCEEEEEEEECCCCCC APDDAIELHKFLASKRAPKLDNLHYSVLALGDSSYEFFCQTGKDFSTRLALLGAKSLLPL CCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCHH VECDVDYEAAAGQWHADVLEAVKPLIETSSASVVSIGTAKTIGESEFTKQNPYSAEVLAS HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHC QKITGRGSDRDVRHVEIDLGDSGLSYQAGDALGVWFSNNEVLVDEVLVGLSLAADELVTL CCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHC GTESLTLKQALLEKKELTQLYPGLVKAWAELSGSAKLLALSEDKEQVRHFILKHQFADLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH AQYPLTNSAVTLSAARLLELLRPLTPRLYSIASSQSEVETEVHLTVALVEDERHGAARFG HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCEEEEEEEEEEECCCCCCHHCC GASHFLASAQEGTQVKVYVESNKHFRLPDNPDTPVIMVGPGTGVAPFRAFMQERVAQGIQ CHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLSRIDVAFSRDQAHKVYVQHRIKEQGQALW CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH QWLQNGAHLYICGDAERMAKDVHQALIEVAVEVGGLNNEAAEAYFETLRSDKRYQKDVY HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure MLLKELSSLASPLSQGQVEKLKQLTSELSAVQLAWVSGYLAATANAGQLAPATEAQTAQT CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE VTILYGSQTGNGRGVAKALADKAQAQGYAVNLASMGEYNVRQLKQETVLLLVVSTHGEGE EEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHCCCEEEEEEEECCCCCC APDDAIELHKFLASKRAPKLDNLHYSVLALGDSSYEFFCQTGKDFSTRLALLGAKSLLPL CCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCHH VECDVDYEAAAGQWHADVLEAVKPLIETSSASVVSIGTAKTIGESEFTKQNPYSAEVLAS HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHC QKITGRGSDRDVRHVEIDLGDSGLSYQAGDALGVWFSNNEVLVDEVLVGLSLAADELVTL CCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHC GTESLTLKQALLEKKELTQLYPGLVKAWAELSGSAKLLALSEDKEQVRHFILKHQFADLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH AQYPLTNSAVTLSAARLLELLRPLTPRLYSIASSQSEVETEVHLTVALVEDERHGAARFG HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCEEEEEEEEEEECCCCCCHHCC GASHFLASAQEGTQVKVYVESNKHFRLPDNPDTPVIMVGPGTGVAPFRAFMQERVAQGIQ CHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC GDSWLFFGNPHFEQDFLYQTEWQQYLKNGDLSRIDVAFSRDQAHKVYVQHRIKEQGQALW CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH QWLQNGAHLYICGDAERMAKDVHQALIEVAVEVGGLNNEAAEAYFETLRSDKRYQKDVY HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]