| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is pntB [H]
Identifier: 160874071
GI number: 160874071
Start: 1124876
End: 1126360
Strand: Reverse
Name: pntB [H]
Synonym: Sbal195_0951
Alternate gene names: 160874071
Gene position: 1126360-1124876 (Counterclockwise)
Preceding gene: 160874072
Following gene: 160874065
Centisome position: 21.06
GC content: 50.91
Gene sequence:
>1485_bases GTGTCTCAAGGACTGGTAACAGCAGCTTACATTATTGCCGCCATTCTCTTCATCTTCAGTCTCGCGGGACTGTCGAAGCA AGAGACGGCAAAACACGGCAATTTATTCGGTATCTTAGGTATGGCAATCGCCCTACTGGCTACCATTTTCAACCCTGATA CTAACGGTATTGCGTGGATCTTAATCGCCATGGTGATTGGCGGCGCGATTGGTATCCGTTTAGCATTAAAAGTCGAAATG ACTGAAATGCCTGAACTGGTTGCCATCTTGCACAGTTTTGTTGGTATGGCCGCGGTATTGGTTGGCTTTAACAGCTTTAT CGACTTACACCCACAGGAAGTGTCGCAAGTCGTCGTAGCTGTCGGTGGCGATATTAATACGACCCTCGCCGCAGTGCACG ATGCCCTCAGTGAAGCGGCCAAAGCCGCCAGCAAAGAACATCTCACTGGCGCCATGCTTAACATTCACTTGGTCGAAGTC TTCCTCGGGATCTTCATCGGTGCGGTCACCTTCACAGGTTCTATCGTGGCCTTTTGTAAGTTACGCGGCGTGATTTCATC TAAACCTTTGATGCTGCCGCATCGCCACAAGTTAAACCTAGTGGCCGTGCTCGTGTCTTTCGCCCTGTTGGTGTACTTCG TCCAAACTGGCGGCACTATGCCGGCACTGCTGTTGATGACCTTGATTGCCTTCGCCTTTGGCTGGCATTTAGTGGCATCG ATTGGCGGCGCAGATATGCCAGTGGTGGTGTCTATGCTGAACTCCTACTCAGGTTGGGCAGCAGCGGCAGCGGGCTTTAT GTTGTCGAACGACCTCTTGATTGTCGTTGGCGCATTAGTGGGTTCATCAGGTGCAATTCTGTCTTACATCATGTGTAAGG CGATGAATCGCTCGTTTATTTCTGTAATCGCAGGTGGCTTTGGCACAGATGGTGTGGCCTCGACTGCCGATGAAGAAATG GGCGAATACCGTGAAACCAACGCTGAAGATGTGGCGGATATGCTGAAAAATGCCACCTCTGTCATCATCACCCCAGGTTA CGGAATGGCAGTGGCACAGGCGCAATATCCTGTCGCTGAAATCACCAAAAGACTGCGCGATCTTGGCGTGAAAGTCCGTT TCGGCATCCACCCAGTTGCAGGCCGTTTACCCGGCCACATGAACGTACTGCTAGCGGAAGCGAAAGTCCCCTACGATATC GTGCTTGAAATGGACGAAATCAACGACGACTTTAACGACACTGACGTAGTACTAGTCATTGGTGCGAACGACACGGTTAA CCCTGCGGCAATGGAAGATCCAGGTAGCCCAATCGCAGGCATGCCAGTGCTCGAAGTGTGGAAAGCGCAAAACGTTATCG GCTTTAAGCGCTCGATGAACACTGGTTATGCCGGCGTGCAAAACCCACTGTTCTTTAAAGATAATACCCAAATGCTGTTT GGGGATGCGAAGGCCAGTGTCGAAGCGATTTTAAAAGCGCTTTGA
Upstream 100 bases:
>100_bases CGTTTATCGCCGTGCTGATCGCCAGTATTAACATCTTCGGTGGCTTTACCGTCACTCAGCGCATGCTGAAGATGTTCCGT AAGGATTAAGGGGGTTTAAC
Downstream 100 bases:
>100_bases GCCTGATGTAACTTCAACAGAGTGTAAATCGCTTAGGCGAAACACACTGTTTCAATGATAAAAAGGGAGCCGCTGGCTCC CTTCTTATATCGTATCTCGC
Product: pyridine nucleotide transhydrogenase
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Pyridine nucleotide transhydrogenase subunit beta [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSQGLVTAAYIIAAILFIFSLAGLSKQETAKHGNLFGILGMAIALLATIFNPDTNGIAWILIAMVIGGAIGIRLALKVEM TEMPELVAILHSFVGMAAVLVGFNSFIDLHPQEVSQVVVAVGGDINTTLAAVHDALSEAAKAASKEHLTGAMLNIHLVEV FLGIFIGAVTFTGSIVAFCKLRGVISSKPLMLPHRHKLNLVAVLVSFALLVYFVQTGGTMPALLLMTLIAFAFGWHLVAS IGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVVGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGVASTADEEM GEYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAEITKRLRDLGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDI VLEMDEINDDFNDTDVVLVIGANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLF GDAKASVEAILKAL
Sequences:
>Translated_494_residues MSQGLVTAAYIIAAILFIFSLAGLSKQETAKHGNLFGILGMAIALLATIFNPDTNGIAWILIAMVIGGAIGIRLALKVEM TEMPELVAILHSFVGMAAVLVGFNSFIDLHPQEVSQVVVAVGGDINTTLAAVHDALSEAAKAASKEHLTGAMLNIHLVEV FLGIFIGAVTFTGSIVAFCKLRGVISSKPLMLPHRHKLNLVAVLVSFALLVYFVQTGGTMPALLLMTLIAFAFGWHLVAS IGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVVGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGVASTADEEM GEYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAEITKRLRDLGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDI VLEMDEINDDFNDTDVVLVIGANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLF GDAKASVEAILKAL >Mature_493_residues SQGLVTAAYIIAAILFIFSLAGLSKQETAKHGNLFGILGMAIALLATIFNPDTNGIAWILIAMVIGGAIGIRLALKVEMT EMPELVAILHSFVGMAAVLVGFNSFIDLHPQEVSQVVVAVGGDINTTLAAVHDALSEAAKAASKEHLTGAMLNIHLVEVF LGIFIGAVTFTGSIVAFCKLRGVISSKPLMLPHRHKLNLVAVLVSFALLVYFVQTGGTMPALLLMTLIAFAFGWHLVASI GGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVVGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGVASTADEEMG EYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAEITKRLRDLGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDIV LEMDEINDDFNDTDVVLVIGANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLFG DAKASVEAILKAL
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=489, Percent_Identity=49.2842535787321, Blast_Score=444, Evalue=1e-125, Organism=Homo sapiens, GI122939153, Length=489, Percent_Identity=49.2842535787321, Blast_Score=444, Evalue=1e-125, Organism=Escherichia coli, GI1787886, Length=497, Percent_Identity=76.4587525150905, Blast_Score=734, Evalue=0.0, Organism=Caenorhabditis elegans, GI17550456, Length=490, Percent_Identity=47.5510204081633, Blast_Score=414, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 52099; Mature: 51968
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGLVTAAYIIAAILFIFSLAGLSKQETAKHGNLFGILGMAIALLATIFNPDTNGIAWI CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH LIAMVIGGAIGIRLALKVEMTEMPELVAILHSFVGMAAVLVGFNSFIDLHPQEVSQVVVA HHHHHHCCHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VGGDINTTLAAVHDALSEAAKAASKEHLTGAMLNIHLVEVFLGIFIGAVTFTGSIVAFCK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGVISSKPLMLPHRHKLNLVAVLVSFALLVYFVQTGGTMPALLLMTLIAFAFGWHLVAS HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVVGALVGSSGAILSYIMCKAMNRSFI CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHH SVIAGGFGTDGVASTADEEMGEYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAE HHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHCCCCHHH ITKRLRDLGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFNDTDVVLVI HHHHHHHCCCEEEECCCHHCCCCCCCCEEEEECCCCCEEEEEEEHHCCCCCCCCCEEEEE GANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEECCCEEEE GDAKASVEAILKAL CCHHHHHHHHHHHC >Mature Secondary Structure SQGLVTAAYIIAAILFIFSLAGLSKQETAKHGNLFGILGMAIALLATIFNPDTNGIAWI CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH LIAMVIGGAIGIRLALKVEMTEMPELVAILHSFVGMAAVLVGFNSFIDLHPQEVSQVVVA HHHHHHCCHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VGGDINTTLAAVHDALSEAAKAASKEHLTGAMLNIHLVEVFLGIFIGAVTFTGSIVAFCK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGVISSKPLMLPHRHKLNLVAVLVSFALLVYFVQTGGTMPALLLMTLIAFAFGWHLVAS HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVVGALVGSSGAILSYIMCKAMNRSFI CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHH SVIAGGFGTDGVASTADEEMGEYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAE HHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHCCCCHHH ITKRLRDLGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFNDTDVVLVI HHHHHHHCCCEEEECCCHHCCCCCCCCEEEEECCCCCEEEEEEEHHCCCCCCCCCEEEEE GANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEECCCEEEE GDAKASVEAILKAL CCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]