| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874069
Identifier: 160874069
GI number: 160874069
Start: 1122907
End: 1123491
Strand: Direct
Name: 160874069
Synonym: Sbal195_0949
Alternate gene names: NA
Gene position: 1122907-1123491 (Clockwise)
Preceding gene: 160874068
Following gene: 160874070
Centisome position: 21.0
GC content: 43.59
Gene sequence:
>585_bases ATGGACATGACACCCTACTCTAATGCCTCCGAGGCTCCCAAACGTAACATCAAGCTCGATAATACAGAGCTCATCAAAAC CAGTTTTTGGGTGAGTCAGATCTTTATGATCATTGCGACGGTTGTCGGGGTGTATTTGGCCGCACAGGAAGGTTTATCGC AGGCGATTAAGTTCGATAACTTAAGTAATATGCAAAACAACTATCATCTGCGCCATGCGCTCTATGATGAGTTGAGTGAC AACGTTGAAGTGCTAAACGCGTATGCAGAGAAGATTCGGACTGAGGCACCCTATGACATAAAGTCAGTGCATCCCAATAT GGCGACCTTTGTATGGGAAAATATGCGTTATTCAGCCAATACTTTAGAAACTCCAAGCAAAATACTGAGTGATGCACGTC GTTTCTACCTCACATCGGCAAATGTGGTTGAAAAGATAGAAAGTAAATTCTACGGCCCACGTTTTGGGGCCACCCAACTC GTTGAGTTAACAGAAGAACTGACCAAATCCACTTTGCCCGCATTAAAAGCAAACTATGAGTCTTTAGCCGCTGAATTAAG AGCAAACGATATTTCGCTCGATTAA
Upstream 100 bases:
>100_bases AATCGTGATTTTTACTGAGGAAACTCATTCTTTAGTCGTGTAAGATATGCCCTTTATTGCGTTATACCGCCTTTTACTCT TGATTTGACAGGATAAACAT
Downstream 100 bases:
>100_bases TTCTAGGGAAGCCATTGCCAAAACGCTGGGTCTGATTCGCGTCACAAGCATGAAAAGTGGTGTGTAAACTGCTGGCTTTT TTGGTGATTAAGTCGAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MDMTPYSNASEAPKRNIKLDNTELIKTSFWVSQIFMIIATVVGVYLAAQEGLSQAIKFDNLSNMQNNYHLRHALYDELSD NVEVLNAYAEKIRTEAPYDIKSVHPNMATFVWENMRYSANTLETPSKILSDARRFYLTSANVVEKIESKFYGPRFGATQL VELTEELTKSTLPALKANYESLAAELRANDISLD
Sequences:
>Translated_194_residues MDMTPYSNASEAPKRNIKLDNTELIKTSFWVSQIFMIIATVVGVYLAAQEGLSQAIKFDNLSNMQNNYHLRHALYDELSD NVEVLNAYAEKIRTEAPYDIKSVHPNMATFVWENMRYSANTLETPSKILSDARRFYLTSANVVEKIESKFYGPRFGATQL VELTEELTKSTLPALKANYESLAAELRANDISLD >Mature_194_residues MDMTPYSNASEAPKRNIKLDNTELIKTSFWVSQIFMIIATVVGVYLAAQEGLSQAIKFDNLSNMQNNYHLRHALYDELSD NVEVLNAYAEKIRTEAPYDIKSVHPNMATFVWENMRYSANTLETPSKILSDARRFYLTSANVVEKIESKFYGPRFGATQL VELTEELTKSTLPALKANYESLAAELRANDISLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22000; Mature: 22000
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMTPYSNASEAPKRNIKLDNTELIKTSFWVSQIFMIIATVVGVYLAAQEGLSQAIKFDN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSNMQNNYHLRHALYDELSDNVEVLNAYAEKIRTEAPYDIKSVHPNMATFVWENMRYSAN HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCC TLETPSKILSDARRFYLTSANVVEKIESKFYGPRFGATQLVELTEELTKSTLPALKANYE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLAAELRANDISLD HHHHHHHHCCCCCC >Mature Secondary Structure MDMTPYSNASEAPKRNIKLDNTELIKTSFWVSQIFMIIATVVGVYLAAQEGLSQAIKFDN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSNMQNNYHLRHALYDELSDNVEVLNAYAEKIRTEAPYDIKSVHPNMATFVWENMRYSAN HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCC TLETPSKILSDARRFYLTSANVVEKIESKFYGPRFGATQLVELTEELTKSTLPALKANYE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SLAAELRANDISLD HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA