| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874056
Identifier: 160874056
GI number: 160874056
Start: 1106436
End: 1106903
Strand: Direct
Name: 160874056
Synonym: Sbal195_0936
Alternate gene names: NA
Gene position: 1106436-1106903 (Clockwise)
Preceding gene: 160874055
Following gene: 160874057
Centisome position: 20.69
GC content: 49.57
Gene sequence:
>468_bases ATGTTGAATCGTGATCTGCTTGGTTCCTTGCTATTTGTCGCCGTGTTTACCGGATATGGCGTGCTGGCATGGCAAATTCC CTTATTGCCGTTTGAAGAATTTGAAGTCGTGACGTCTTCCACTATGCCGAAGATTTATGCTGCCATGGGGCTGATGTTTA GTCTGTTTTCTCTGGTTGCTGTCTTGCTGAAAGGAAACACGGTTCAACAGCGGGGGGCGCTGCTGACTAAAGCCGCCTTA CAACAAACCGCGGCGCTGATTGTGCTTATGGTCTTGTATGCCGCCGGACTCGAACCGTTGGGGTTTGTTGTCGCTACTTT ATTGTTTTTGGTCGCTGGATTTTGGTTGATGGGAGAGCGCCGCTTTAAGATCTTGTTGCTCGCCTCTGTGCCCGTGGTGT TGGTGTTCTGGGTGTTGATGACGCAAGTCTTAGGTATCTACTTGGCCTCAGGTTCTCTTTGGAGTTAA
Upstream 100 bases:
>100_bases TTTGAACCCCAAGCCGAATTCATTAAGTCATTGGAAGCACAGGAGCAACAGCTTAAAGCCACTATGTTGCAACTGGGCTT TATTAAGTAAGGAGTGACAG
Downstream 100 bases:
>100_bases CTATGTTCGATGCAATGTTTATTGGTCTATCGACCGCGTTTGAATTGCAAAACCTCATGTATGTGGTCTTAGGCTGCTTG GTCGGCACAGTAATCGGTAT
Product: putative tricarboxylic transport membrane protein
Products: NA
Alternate protein names: Tricarboxylic Transport Protein TctB; Tricarboxylic Transport Membrane Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLNRDLLGSLLFVAVFTGYGVLAWQIPLLPFEEFEVVTSSTMPKIYAAMGLMFSLFSLVAVLLKGNTVQQRGALLTKAAL QQTAALIVLMVLYAAGLEPLGFVVATLLFLVAGFWLMGERRFKILLLASVPVVLVFWVLMTQVLGIYLASGSLWS
Sequences:
>Translated_155_residues MLNRDLLGSLLFVAVFTGYGVLAWQIPLLPFEEFEVVTSSTMPKIYAAMGLMFSLFSLVAVLLKGNTVQQRGALLTKAAL QQTAALIVLMVLYAAGLEPLGFVVATLLFLVAGFWLMGERRFKILLLASVPVVLVFWVLMTQVLGIYLASGSLWS >Mature_155_residues MLNRDLLGSLLFVAVFTGYGVLAWQIPLLPFEEFEVVTSSTMPKIYAAMGLMFSLFSLVAVLLKGNTVQQRGALLTKAAL QQTAALIVLMVLYAAGLEPLGFVVATLLFLVAGFWLMGERRFKILLLASVPVVLVFWVLMTQVLGIYLASGSLWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16932; Mature: 16932
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRDLLGSLLFVAVFTGYGVLAWQIPLLPFEEFEVVTSSTMPKIYAAMGLMFSLFSLVA CCCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VLLKGNTVQQRGALLTKAALQQTAALIVLMVLYAAGLEPLGFVVATLLFLVAGFWLMGER HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC RFKILLLASVPVVLVFWVLMTQVLGIYLASGSLWS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLNRDLLGSLLFVAVFTGYGVLAWQIPLLPFEEFEVVTSSTMPKIYAAMGLMFSLFSLVA CCCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VLLKGNTVQQRGALLTKAALQQTAALIVLMVLYAAGLEPLGFVVATLLFLVAGFWLMGER HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC RFKILLLASVPVVLVFWVLMTQVLGIYLASGSLWS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA