| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874046
Identifier: 160874046
GI number: 160874046
Start: 1091343
End: 1092317
Strand: Reverse
Name: 160874046
Synonym: Sbal195_0926
Alternate gene names: NA
Gene position: 1092317-1091343 (Counterclockwise)
Preceding gene: 160874049
Following gene: 160874045
Centisome position: 20.43
GC content: 49.85
Gene sequence:
>975_bases ATGGCAGGAATGCTAACCCGTGTTCTCACATCGATCCTCTTTTTAGCCGTTATGCTGTCGCTGACGGGTTGTGGCGATGA GAGACCGGATAAAATCGCGAAGTATCAACAACTCACGCAGCAACGTCTCGCTACGCTCACGACGATGATCGATGACGGGC AGTTGCGTAACGCTAACCTCTTAAAACAATACACCACACTGTTAAAGCAGCAGAAACCTGATTTAGCCCCATTACTTGAT GAATTAGCAAAGGATTCTGGCACCCAAGGTCCCATGTATTCCTCGCTGAAACGTCGATTAGATGAATCGAAAGTGGCGAG TAACTTTGCCGATCTCGATCAACAGCTGGCCGAAGCGGAAAATCTTTATCAAGCCGCTGATCCCAGTTTGTTTAACGATA TGTTGTCAGACCCTGTCAACGTGGTTGCCGATATGTCCGACGGCAAACTTGCCCGCGTGAATGCGATTAGCCGTGAGGCA GCAACATTAGCCAATGGCGGCGAAGATTTTGGTCCAGGCAGTCAGCTAGTTGGTAATCCGTCTTACGGTAACTGGCAAAC CGACTCGAGCGGCACGTCGTTTTGGGCTTGGTATGGCATGTATTCGATGTTTTCGAATGTCTTCAATCGCCCAGTTTCCT ACGATCGTTGGTCGGGTAACCGAGGTTATAGCTATTACAATGACGTAGGTCGTTATCGCTATACCTCACCCAAACAAGCG GATGCGCAAAATAAGACCTTCGAACAAACGAAAAAACGTTTCGATTCCCAAGGTAAGCGCTTCGACAGCCCTTATGCCAA ACCACGTACCGGTGGCACGGCGTTATCCCGTGAAAGTACCAGCACGCCCAAGGCCAGCAACACCACGAGCGCAAGCAAGA GTTCGAGTAGTAAGTTCCGCTCTAACTATGCTAAAGACAGCAGTTTCCGTAATTCCAGTAATCGCACGACCCGCAGTGTG CGCCGGGGCAAGTAA
Upstream 100 bases:
>100_bases ATTTAAGGGTACTATAACCTGCGCAGCAGGCATATTGGGCAAGCAGATTATTATTGCCTGCAAGTATTTGAGTTTTATTT CATTACCATTTGGAGAAAAC
Downstream 100 bases:
>100_bases CTAAGGATTTCCAATGACACTATTTCAGGATTTCGGTATCACACCAGAGCTAGCCATCATTCTGGCTATCGATCTCACCA TAGCCGTGATTTTGCTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANLLKQYTTLLKQQKPDLAPLLD ELAKDSGTQGPMYSSLKRRLDESKVASNFADLDQQLAEAENLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREA ATLANGGEDFGPGSQLVGNPSYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQA DAQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFRSNYAKDSSFRNSSNRTTRSV RRGK
Sequences:
>Translated_324_residues MAGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANLLKQYTTLLKQQKPDLAPLLD ELAKDSGTQGPMYSSLKRRLDESKVASNFADLDQQLAEAENLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREA ATLANGGEDFGPGSQLVGNPSYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQA DAQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFRSNYAKDSSFRNSSNRTTRSV RRGK >Mature_323_residues AGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANLLKQYTTLLKQQKPDLAPLLDE LAKDSGTQGPMYSSLKRRLDESKVASNFADLDQQLAEAENLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREAA TLANGGEDFGPGSQLVGNPSYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQAD AQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFRSNYAKDSSFRNSSNRTTRSVR RGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35970; Mature: 35839
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LKQYTTLLKQQKPDLAPLLDELAKDSGTQGPMYSSLKRRLDESKVASNFADLDQQLAEAE HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREAATLANGGEDFGPGSQLVGNP HHHHHCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEECCCCCCC DAQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SNYAKDSSFRNSSNRTTRSVRRGK HHHHHCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure AGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANL CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LKQYTTLLKQQKPDLAPLLDELAKDSGTQGPMYSSLKRRLDESKVASNFADLDQQLAEAE HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREAATLANGGEDFGPGSQLVGNP HHHHHCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEECCCCCCC DAQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SNYAKDSSFRNSSNRTTRSVRRGK HHHHHCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA