| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874041
Identifier: 160874041
GI number: 160874041
Start: 1086693
End: 1087346
Strand: Reverse
Name: 160874041
Synonym: Sbal195_0921
Alternate gene names: NA
Gene position: 1087346-1086693 (Counterclockwise)
Preceding gene: 160874042
Following gene: 160874040
Centisome position: 20.33
GC content: 48.93
Gene sequence:
>654_bases ATGGGATTTTTCAATAGTATTTTTGGTAAGAAAGCAGCGCCACAGCGCGAGCTCAATCACCCATCCCAGCTCAATGTGGG CGACATGATCTCAATTGATGACAGCTTTGCCCTGCCGCCACAACTTCGTGGTCAACAATTGAGGGTCGAAGCCGTACATA CCTACGAGTCTGAACGTAAACAGCAAACCGAATGGTTACTCAAAGGTCATGGCAGCGACACACTCTTTTTAAGTATCGAA GAAGACGACGAAACCTATCTCGCCTTTTCGATTAAGATTTCCCGCGCCCAAGTGGAACAGTTATTCGATCTTGAGCAGTT CAGCGCCCTGTTCGATGAACCGGGTCATGCAGAGTTAACCACTCAAATATTACCGGCCGACTTAGCGGAACAACTGGAAC AATGGCTTGGAAAGCAATATCACCAAGTGACGTTTGCCGCTTTTGGCTATTTCCATCGTCAGGATTACCGCGGTCAAAAA CCACCACAAGACGCCAATGGCGCCACGGGTGAGCCCTTCGAGTACTATTTACTGCTCGATGACGATGAAAGCTGCGCCGT CGAAGTGGAAGTCTACGAAGGGGGCGACACAGATGTTGTCTTGACCCTATATCGTCCACTGACGGATATTCGAGATTACT GGCCAGCGAAATAA
Upstream 100 bases:
>100_bases TTTTGTTTCATCCGCATAAAATAATTGACCACTATTGCCCGTTACGATCCGCAGCTAATCGATTTGAAGCCGCACGCGAG CATAGTCAGCAGGAGTCACT
Downstream 100 bases:
>100_bases CCCAAAAATAAGATAAAGTGCGTGCTCGCACTTTATCGATAATCCCAATACAATCTCACAGATAAGCGCTAGAAACGGTT GATAGCAATAGGTAATACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MGFFNSIFGKKAAPQRELNHPSQLNVGDMISIDDSFALPPQLRGQQLRVEAVHTYESERKQQTEWLLKGHGSDTLFLSIE EDDETYLAFSIKISRAQVEQLFDLEQFSALFDEPGHAELTTQILPADLAEQLEQWLGKQYHQVTFAAFGYFHRQDYRGQK PPQDANGATGEPFEYYLLLDDDESCAVEVEVYEGGDTDVVLTLYRPLTDIRDYWPAK
Sequences:
>Translated_217_residues MGFFNSIFGKKAAPQRELNHPSQLNVGDMISIDDSFALPPQLRGQQLRVEAVHTYESERKQQTEWLLKGHGSDTLFLSIE EDDETYLAFSIKISRAQVEQLFDLEQFSALFDEPGHAELTTQILPADLAEQLEQWLGKQYHQVTFAAFGYFHRQDYRGQK PPQDANGATGEPFEYYLLLDDDESCAVEVEVYEGGDTDVVLTLYRPLTDIRDYWPAK >Mature_216_residues GFFNSIFGKKAAPQRELNHPSQLNVGDMISIDDSFALPPQLRGQQLRVEAVHTYESERKQQTEWLLKGHGSDTLFLSIEE DDETYLAFSIKISRAQVEQLFDLEQFSALFDEPGHAELTTQILPADLAEQLEQWLGKQYHQVTFAAFGYFHRQDYRGQKP PQDANGATGEPFEYYLLLDDDESCAVEVEVYEGGDTDVVLTLYRPLTDIRDYWPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24845; Mature: 24714
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFNSIFGKKAAPQRELNHPSQLNVGDMISIDDSFALPPQLRGQQLRVEAVHTYESERK CCCHHHHHCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHH QQTEWLLKGHGSDTLFLSIEEDDETYLAFSIKISRAQVEQLFDLEQFSALFDEPGHAELT HHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEH TQILPADLAEQLEQWLGKQYHQVTFAAFGYFHRQDYRGQKPPQDANGATGEPFEYYLLLD HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE DDESCAVEVEVYEGGDTDVVLTLYRPLTDIRDYWPAK CCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHCCCC >Mature Secondary Structure GFFNSIFGKKAAPQRELNHPSQLNVGDMISIDDSFALPPQLRGQQLRVEAVHTYESERK CCHHHHHCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHH QQTEWLLKGHGSDTLFLSIEEDDETYLAFSIKISRAQVEQLFDLEQFSALFDEPGHAELT HHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEH TQILPADLAEQLEQWLGKQYHQVTFAAFGYFHRQDYRGQKPPQDANGATGEPFEYYLLLD HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE DDESCAVEVEVYEGGDTDVVLTLYRPLTDIRDYWPAK CCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA