| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is kcsA [H]
Identifier: 160874039
GI number: 160874039
Start: 1085282
End: 1086106
Strand: Reverse
Name: kcsA [H]
Synonym: Sbal195_0919
Alternate gene names: 160874039
Gene position: 1086106-1085282 (Counterclockwise)
Preceding gene: 160874040
Following gene: 160874037
Centisome position: 20.31
GC content: 47.15
Gene sequence:
>825_bases ATGACAGATAAAACCCCATGGTCACTTCGCACCCTTGGCACCCCTTCTCCATTCGAAATGGCGATGATGCTGTTATCCTT GCTGTCGGTGATCATAGTGCTCGTCATGACCTTCGGCCGTCTCGATAGCGAAACCTACCGCTTACTCTTCTTCGTCGACA CCAGCATTTGCATGATTTTCATGATCAACTTCTTTGTTGGGTTGATCCGCGCCCGCGACAAACTATTTTTTATCAAACAC CATTGGGTGGATTTTATTGCCAGTATTCCAGCAATAGAAGCCCTGCGTATGGCGCGGCTGTTCCAAATCCTGCGGGTTAT ACGCCTGATCCGTATGAGTCGCTCATTACTGCTTCCGCTGATCAAACAACGTAAACAAGCCACCTTAGCCAGTTTACTCG TCGCTATGGTGACGATTCTGACATTAGCCTCTGTCATCATTTTAATCGTCGAAAGCGGTACTGAAGGTGCCAATATTCAA ACTGCAGAACAGGCAATTTGGTGGGCGTTAGTGACTATTTCTACCGTCGGTTACGGTGATTATTATCCGGTGACGACAGC TGGCCATATCATAGGCGGTATTGTGATTGTCAGCGGCGTGAGCTTTTTCGGGGTGATCTCAGGTTATATGGCATCGGTAT TTGTCGCGCCCGATGAAACTGAGCGTCAGGAACGCCAAGAGGCCCATAAAGCCGAAATAAAGTCAGAGCTTGAATTAGCC TTAGCGAGAATGGAAGAAAACCAGCAGAAAATGGAACAGAACCAAGCGCAAATGCTCGCAAAAATTGCAGAGCTTAAACA GGTTATCGAAACCAGAAATAACTGA
Upstream 100 bases:
>100_bases GACAAATAGCCCTTTTATTGACTAAGACAATTTACTCATAGCCTAAAGTCTTTTACTTTAGTTGAGATATTCGCCGCACT TAACAGGGATCATGTTTGGC
Downstream 100 bases:
>100_bases TTTAGCGAAGAATTGGCTAACAATCTACAAAAGAAAGGGCTCAATCCATATTGGATTGAGCCCTTAGTATTTTTCAGTGC CGAGCTAGAATCAGTGCTGC
Product: Ion transport 2 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTDKTPWSLRTLGTPSPFEMAMMLLSLLSVIIVLVMTFGRLDSETYRLLFFVDTSICMIFMINFFVGLIRARDKLFFIKH HWVDFIASIPAIEALRMARLFQILRVIRLIRMSRSLLLPLIKQRKQATLASLLVAMVTILTLASVIILIVESGTEGANIQ TAEQAIWWALVTISTVGYGDYYPVTTAGHIIGGIVIVSGVSFFGVISGYMASVFVAPDETERQERQEAHKAEIKSELELA LARMEENQQKMEQNQAQMLAKIAELKQVIETRNN
Sequences:
>Translated_274_residues MTDKTPWSLRTLGTPSPFEMAMMLLSLLSVIIVLVMTFGRLDSETYRLLFFVDTSICMIFMINFFVGLIRARDKLFFIKH HWVDFIASIPAIEALRMARLFQILRVIRLIRMSRSLLLPLIKQRKQATLASLLVAMVTILTLASVIILIVESGTEGANIQ TAEQAIWWALVTISTVGYGDYYPVTTAGHIIGGIVIVSGVSFFGVISGYMASVFVAPDETERQERQEAHKAEIKSELELA LARMEENQQKMEQNQAQMLAKIAELKQVIETRNN >Mature_273_residues TDKTPWSLRTLGTPSPFEMAMMLLSLLSVIIVLVMTFGRLDSETYRLLFFVDTSICMIFMINFFVGLIRARDKLFFIKHH WVDFIASIPAIEALRMARLFQILRVIRLIRMSRSLLLPLIKQRKQATLASLLVAMVTILTLASVIILIVESGTEGANIQT AEQAIWWALVTISTVGYGDYYPVTTAGHIIGGIVIVSGVSFFGVISGYMASVFVAPDETERQERQEAHKAEIKSELELAL ARMEENQQKMEQNQAQMLAKIAELKQVIETRNN
Specific function: Acts as a potassium ion channel [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the potassium channel family [H]
Homologues:
Organism=Homo sapiens, GI26051262, Length=237, Percent_Identity=26.5822784810127, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI26051260, Length=237, Percent_Identity=26.5822784810127, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI26051266, Length=237, Percent_Identity=26.5822784810127, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI26051264, Length=237, Percent_Identity=26.5822784810127, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI26051268, Length=143, Percent_Identity=32.1678321678322, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI27436974, Length=305, Percent_Identity=23.9344262295082, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27436986, Length=173, Percent_Identity=27.7456647398844, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI27436984, Length=173, Percent_Identity=27.7456647398844, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI9789987, Length=173, Percent_Identity=27.7456647398844, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI119395748, Length=187, Percent_Identity=26.7379679144385, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI27436981, Length=167, Percent_Identity=26.9461077844311, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4826784, Length=184, Percent_Identity=27.1739130434783, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI88758565, Length=187, Percent_Identity=26.7379679144385, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI25952087, Length=107, Percent_Identity=33.6448598130841, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI25952092, Length=175, Percent_Identity=30.8571428571429, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4758630, Length=255, Percent_Identity=26.2745098039216, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4504821, Length=107, Percent_Identity=33.6448598130841, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI27436993, Length=111, Percent_Identity=34.2342342342342, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI19071574, Length=111, Percent_Identity=34.2342342342342, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI26638650, Length=169, Percent_Identity=31.9526627218935, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI62388890, Length=169, Percent_Identity=31.9526627218935, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI238624130, Length=169, Percent_Identity=31.9526627218935, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI238624132, Length=169, Percent_Identity=31.9526627218935, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4504817, Length=107, Percent_Identity=33.6448598130841, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4826782, Length=193, Percent_Identity=25.9067357512953, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI236462242, Length=143, Percent_Identity=28.6713286713287, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI236461942, Length=139, Percent_Identity=28.7769784172662, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI236461719, Length=139, Percent_Identity=28.7769784172662, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI236462079, Length=139, Percent_Identity=28.7769784172662, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI28373065, Length=139, Percent_Identity=28.7769784172662, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI26638655, Length=143, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI26638653, Length=143, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17544122, Length=239, Percent_Identity=26.7782426778243, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI25147242, Length=139, Percent_Identity=32.3741007194245, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25147238, Length=139, Percent_Identity=32.3741007194245, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71989361, Length=111, Percent_Identity=35.1351351351351, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25148255, Length=113, Percent_Identity=35.3982300884956, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71989369, Length=107, Percent_Identity=35.5140186915888, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71989381, Length=107, Percent_Identity=35.5140186915888, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71989376, Length=107, Percent_Identity=35.5140186915888, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193206869, Length=113, Percent_Identity=35.3982300884956, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI72001311, Length=164, Percent_Identity=30.4878048780488, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI72001309, Length=164, Percent_Identity=30.4878048780488, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI72001307, Length=164, Percent_Identity=30.4878048780488, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161084970, Length=174, Percent_Identity=27.5862068965517, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI17737641, Length=174, Percent_Identity=27.5862068965517, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI221330117, Length=139, Percent_Identity=30.9352517985612, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281363095, Length=139, Percent_Identity=30.9352517985612, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI221330119, Length=139, Percent_Identity=30.9352517985612, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281363097, Length=139, Percent_Identity=30.9352517985612, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI45555859, Length=107, Percent_Identity=33.6448598130841, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45549143, Length=107, Percent_Identity=33.6448598130841, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642910, Length=107, Percent_Identity=33.6448598130841, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24642914, Length=107, Percent_Identity=33.6448598130841, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24642916, Length=107, Percent_Identity=33.6448598130841, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI116007764, Length=111, Percent_Identity=30.6306306306306, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003091 [H]
Pfam domain/function: PF07885 Ion_trans_2 [H]
EC number: NA
Molecular weight: Translated: 30888; Mature: 30757
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKTPWSLRTLGTPSPFEMAMMLLSLLSVIIVLVMTFGRLDSETYRLLFFVDTSICMIF CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH MINFFVGLIRARDKLFFIKHHWVDFIASIPAIEALRMARLFQILRVIRLIRMSRSLLLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKQRKQATLASLLVAMVTILTLASVIILIVESGTEGANIQTAEQAIWWALVTISTVGYGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC YYPVTTAGHIIGGIVIVSGVSFFGVISGYMASVFVAPDETERQERQEAHKAEIKSELELA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH LARMEENQQKMEQNQAQMLAKIAELKQVIETRNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDKTPWSLRTLGTPSPFEMAMMLLSLLSVIIVLVMTFGRLDSETYRLLFFVDTSICMIF CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH MINFFVGLIRARDKLFFIKHHWVDFIASIPAIEALRMARLFQILRVIRLIRMSRSLLLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKQRKQATLASLLVAMVTILTLASVIILIVESGTEGANIQTAEQAIWWALVTISTVGYGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC YYPVTTAGHIIGGIVIVSGVSFFGVISGYMASVFVAPDETERQERQEAHKAEIKSELELA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH LARMEENQQKMEQNQAQMLAKIAELKQVIETRNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]