| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874028
Identifier: 160874028
GI number: 160874028
Start: 1070148
End: 1070666
Strand: Reverse
Name: 160874028
Synonym: Sbal195_0907
Alternate gene names: NA
Gene position: 1070666-1070148 (Counterclockwise)
Preceding gene: 160874032
Following gene: 160874026
Centisome position: 20.02
GC content: 48.36
Gene sequence:
>519_bases ATGCCAAATAAAAATGCCGGTTTTACCCTGATTGAACTCGTTGTGGTCATTATTATTCTAGGAGTATTAGCCGTAGTTGC TGCGCCTAAATTCATTAATATACAATCAGATGCCTATAAGAGTCAGCTTTCAGGTGCACAGGCTTCGATGAAATCCGCCG TCACCCTATTCAAAGCTAAGTCGGAAATAGCTAACAGCGGCACCACCAATCGAGTCGTTTACGATGGGATCCGTGGCGAA AACTACCAACCTTGGGCTGCCAGCGCCAGCGGTACAGCACCAAGCGCCGCTTATACTACGCCGCCAGAGATATTTAAGGC TGCTGGGCTCAATGTCGATGAATGGTCCTATCGAATCCATACTGCTGGCGGTACCTACCAAGTCATTGCCACACCGAAGC AAAAACTGAATCTTGACACGCCGACTCAAGCGCAAGTCGAAGCGACAAATTGCTATATAGACTACAAGTGGGAGACGACG GGAATCCCCACCTATAACAAGGTCGACACAGGTTGCTAG
Upstream 100 bases:
>100_bases AGATAAACAAATCCCTGAGTTAACGGAACTTTCCCTAGCACTAGCCTGTTTGGGGAAACTTAGGTAGCATGAACCTCTTT GTATTCATTATCCTCTACCT
Downstream 100 bases:
>100_bases AACGACCTTAAAGCTGAAATATAATAGAAAAACAGCGAGCTAACCTAAGGTTATCTCGCTGTTTTTGTTAGCGCCACATT TTACAATCAAACGTTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MPNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAKSEIANSGTTNRVVYDGIRGE NYQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIHTAGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETT GIPTYNKVDTGC
Sequences:
>Translated_172_residues MPNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAKSEIANSGTTNRVVYDGIRGE NYQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIHTAGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETT GIPTYNKVDTGC >Mature_171_residues PNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAKSEIANSGTTNRVVYDGIRGEN YQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIHTAGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETTG IPTYNKVDTGC
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18456; Mature: 18325
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAK CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHH SEIANSGTTNRVVYDGIRGENYQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIH HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE TAGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETTGIPTYNKVDTGC ECCCEEEEEECCHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure PNKNAGFTLIELVVVIIILGVLAVVAAPKFINIQSDAYKSQLSGAQASMKSAVTLFKAK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHH SEIANSGTTNRVVYDGIRGENYQPWAASASGTAPSAAYTTPPEIFKAAGLNVDEWSYRIH HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE TAGGTYQVIATPKQKLNLDTPTQAQVEATNCYIDYKWETTGIPTYNKVDTGC ECCCEEEEEECCHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA