| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874025
Identifier: 160874025
GI number: 160874025
Start: 1065590
End: 1066651
Strand: Direct
Name: 160874025
Synonym: Sbal195_0904
Alternate gene names: NA
Gene position: 1065590-1066651 (Clockwise)
Preceding gene: 160874024
Following gene: 160874027
Centisome position: 19.93
GC content: 46.23
Gene sequence:
>1062_bases ATGTTTCGAAGGACTGTTTTACTAAGCATCTTCTTGAGCGCAGCGAGCGCTGCATCAATTCAACCAGAGTTGCAACCAGA GTCGCAACCCTTACAGCACTACATTTACATTAATCATCGTGAGGCAAACGGAGAAAACATTCGTGCCGACAAGGCGCTGC GCGATCCCCGTTTTGGCGGTGCGCAGATTGTTTATACCTGGCGCAGTTTAGAGCCTAAGCAGGGCGAATATGATTTCAGC GCGATTAGGGCCGATATTGCGTATCTCGATTCGATAGGCAAAAAATTGTGGATCCAGCTGCAAGAGAAATCCTTTACGCC TAGAGTCAATGTACCGGCTTATTTGCTCGATGAGCCTATTTATCAAGGCGGCGTGTTGAAGCAAAGCATGCTGAGCGCAC CAGAGCGTGAACCCAATAAACCTGTGACGGATGACGAATATGGTTGGTCTGCCAAAATGTGGGAGCCTGCAGTACGTGCG CGTTATCAACAATTGGTGCGCCAGCTAGGCCAAGAGTTTGATGGGAAAATCACTGGCATTAACTTTAGTGAAAGCTCAAT TGATGTGGGGACTGAAAACGCCGACGGAACAACTACCTTCCCCAGTGATTTTAATCCTAAAGACTATATCGATGCGATTG GCGAAAACATGCAGGTATTAGCTGAGTCATTTCAGCATTCAACCGCTATGGTGTATTTGAATTTTTTACCAGACGAATGG CTGCCATGGAATGACAAAGGCTATATGCGAGGCTTATTTGCGCAAGCCAAAGCGCTCAATATGGGCGTAGGTGGCCCAGA TTTAATGCCATATCGTAAAGGCCATATGGGGCAGAGTTACGCCTTTATTAAAGAATATCCAGCGGCATTGGTGAAAGGCA TGGCGGTGCAAGACGGTAATTTGCGGCAGATTAATCCCAAGACAGGTAAAAAGAATACTGTGCCTGATCTGCTGGATTTT GCACAAAACTACCTAGGGCTAGACTATATTTTTTGGGTTGAAGATGATCCCTATTTTACGGATGAAGTCCTGCAGCAGTT GCCAGATATTAAGGCGAATTAA
Upstream 100 bases:
>100_bases CCCTCAGCTTGCCTGTGGTAGAAGTGATTCTGAGTAAAAAATAAATGAGCAGATTAACAGCTTTGTCAGGTGATAAGGCG TGTATCGGTTTGGAGTATTT
Downstream 100 bases:
>100_bases CTTAGCTTATTGTTTAGGCTGTTGTTTAAAGTGGCGATTGTTCAAGTGAGTTATTGGTCAAAGTGTGGATAATGAGCTAA ACGTATTGTGCAGCTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MFRRTVLLSIFLSAASAASIQPELQPESQPLQHYIYINHREANGENIRADKALRDPRFGGAQIVYTWRSLEPKQGEYDFS AIRADIAYLDSIGKKLWIQLQEKSFTPRVNVPAYLLDEPIYQGGVLKQSMLSAPEREPNKPVTDDEYGWSAKMWEPAVRA RYQQLVRQLGQEFDGKITGINFSESSIDVGTENADGTTTFPSDFNPKDYIDAIGENMQVLAESFQHSTAMVYLNFLPDEW LPWNDKGYMRGLFAQAKALNMGVGGPDLMPYRKGHMGQSYAFIKEYPAALVKGMAVQDGNLRQINPKTGKKNTVPDLLDF AQNYLGLDYIFWVEDDPYFTDEVLQQLPDIKAN
Sequences:
>Translated_353_residues MFRRTVLLSIFLSAASAASIQPELQPESQPLQHYIYINHREANGENIRADKALRDPRFGGAQIVYTWRSLEPKQGEYDFS AIRADIAYLDSIGKKLWIQLQEKSFTPRVNVPAYLLDEPIYQGGVLKQSMLSAPEREPNKPVTDDEYGWSAKMWEPAVRA RYQQLVRQLGQEFDGKITGINFSESSIDVGTENADGTTTFPSDFNPKDYIDAIGENMQVLAESFQHSTAMVYLNFLPDEW LPWNDKGYMRGLFAQAKALNMGVGGPDLMPYRKGHMGQSYAFIKEYPAALVKGMAVQDGNLRQINPKTGKKNTVPDLLDF AQNYLGLDYIFWVEDDPYFTDEVLQQLPDIKAN >Mature_353_residues MFRRTVLLSIFLSAASAASIQPELQPESQPLQHYIYINHREANGENIRADKALRDPRFGGAQIVYTWRSLEPKQGEYDFS AIRADIAYLDSIGKKLWIQLQEKSFTPRVNVPAYLLDEPIYQGGVLKQSMLSAPEREPNKPVTDDEYGWSAKMWEPAVRA RYQQLVRQLGQEFDGKITGINFSESSIDVGTENADGTTTFPSDFNPKDYIDAIGENMQVLAESFQHSTAMVYLNFLPDEW LPWNDKGYMRGLFAQAKALNMGVGGPDLMPYRKGHMGQSYAFIKEYPAALVKGMAVQDGNLRQINPKTGKKNTVPDLLDF AQNYLGLDYIFWVEDDPYFTDEVLQQLPDIKAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40031; Mature: 40031
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRTVLLSIFLSAASAASIQPELQPESQPLQHYIYINHREANGENIRADKALRDPRFGG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHCCCCCCC AQIVYTWRSLEPKQGEYDFSAIRADIAYLDSIGKKLWIQLQEKSFTPRVNVPAYLLDEPI EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHCCCH YQGGVLKQSMLSAPEREPNKPVTDDEYGWSAKMWEPAVRARYQQLVRQLGQEFDGKITGI HCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCEEEEE NFSESSIDVGTENADGTTTFPSDFNPKDYIDAIGENMQVLAESFQHSTAMVYLNFLPDEW CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCC LPWNDKGYMRGLFAQAKALNMGVGGPDLMPYRKGHMGQSYAFIKEYPAALVKGMAVQDGN CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCC LRQINPKTGKKNTVPDLLDFAQNYLGLDYIFWVEDDPYFTDEVLQQLPDIKAN CEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MFRRTVLLSIFLSAASAASIQPELQPESQPLQHYIYINHREANGENIRADKALRDPRFGG CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHCCCCCCC AQIVYTWRSLEPKQGEYDFSAIRADIAYLDSIGKKLWIQLQEKSFTPRVNVPAYLLDEPI EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHCCCH YQGGVLKQSMLSAPEREPNKPVTDDEYGWSAKMWEPAVRARYQQLVRQLGQEFDGKITGI HCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCEEEEE NFSESSIDVGTENADGTTTFPSDFNPKDYIDAIGENMQVLAESFQHSTAMVYLNFLPDEW CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCC LPWNDKGYMRGLFAQAKALNMGVGGPDLMPYRKGHMGQSYAFIKEYPAALVKGMAVQDGN CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEECCCC LRQINPKTGKKNTVPDLLDFAQNYLGLDYIFWVEDDPYFTDEVLQQLPDIKAN CEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA