| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yhhW [C]
Identifier: 160874023
GI number: 160874023
Start: 1062729
End: 1063601
Strand: Direct
Name: yhhW [C]
Synonym: Sbal195_0902
Alternate gene names: 160874023
Gene position: 1062729-1063601 (Clockwise)
Preceding gene: 160874021
Following gene: 160874024
Centisome position: 19.87
GC content: 49.26
Gene sequence:
>873_bases ATGAAAGTATTAAGTCAGTTTTCCGCCAAAGCCGCGATGGATGGCGATGGGGTCAATATTCGCCGTGTCGCCGATTTTGT GACGACTAAATTTGATCCTTTCTTGATGATCGACGAAATAAAATCCGATGATGAACAAGACTTTATCGGTGGCTTCCCAG CACATCCCCATCGCGGAATGGAGACCTTTACTTATATTCGTAAGGGTGGTTTTGAGCACCGTGACCAAATGGGTAATGTG AAGGCGATTCGTGCCGGCGATGTGCAGTGGATGAGTACCGGGTTCGGGGTAGTGCATTCTGAAATGCCACTTGCCGATGC TGTCGATGGTCTGCATGGATTCCAAATTTGGGTCAACATGCCCGCCAAAGACAAGTTGCGTCCAGCTAAGTATCAAGATA CTGCGGGTAGCGCTAGCGTTGAAGCGGCCAATGACACGGGCGCTAGTTTAAAAGCCTTAGCGGGTGATTGGGGCTTTAAA GATCAACCACAGATTAGTGCTGCCATCCAAGGATTAGCGGGCGAAGCTGCCATTGCTGATTTGAGCCTAGCGCCAAACGC TGAGGCCACGCTTGATTTGTCTCAACACGAGTTTGTCGCCTTGTACTTGTACCAAGGTGACTTAAGCAAGGGTGAAGATT CACAGTGGTCACCTGCTTCAAATCAACATCATCAGGGCGAGTTTTTAGTGCTTGATAGCCAAAGTGTGCTTAAGCTTAAA GCCGATGAGCGTGGCGCTGGGATGTTACTGTTTGCGGGTAAACCTATCCGTGAAAAAATCGTTCAGATGGGCCCCTTTGT GATGAACACCCAAGCGGAAATTCAGCAGGCGATTCGCGATTATCAAGAAGGGCGTTTCGGCCACATCGCGTAA
Upstream 100 bases:
>100_bases TTGTTATTCTGCCTCCATCAGCAAAGTGTTTGCGTCTTGTGTTAGCCGCAGTATTTTGGCTTTTCACGCACCACTTTGCT CAACCGATAGGAGAGCAGCA
Downstream 100 bases:
>100_bases TTTGTTAAATCTGCCGCGCTGAGCTAATTCTAAATCCAAGCCTAAATCTAAGTCTAAGCCCTGTATTCCTACAGGGCTTT TTTGTTGCTGTTCACGCCTG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein VC_A0969 [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEAANDTGASLKALAGDWGFK DQPQISAAIQGLAGEAAIADLSLAPNAEATLDLSQHEFVALYLYQGDLSKGEDSQWSPASNQHHQGEFLVLDSQSVLKLK ADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGHIA
Sequences:
>Translated_290_residues MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEAANDTGASLKALAGDWGFK DQPQISAAIQGLAGEAAIADLSLAPNAEATLDLSQHEFVALYLYQGDLSKGEDSQWSPASNQHHQGEFLVLDSQSVLKLK ADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGHIA >Mature_290_residues MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGMETFTYIRKGGFEHRDQMGNV KAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNMPAKDKLRPAKYQDTAGSASVEAANDTGASLKALAGDWGFK DQPQISAAIQGLAGEAAIADLSLAPNAEATLDLSQHEFVALYLYQGDLSKGEDSQWSPASNQHHQGEFLVLDSQSVLKLK ADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGHIA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=289, Percent_Identity=31.1418685121107, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI4505823, Length=289, Percent_Identity=31.1418685121107, Blast_Score=144, Evalue=1e-34, Organism=Escherichia coli, GI1789847, Length=105, Percent_Identity=38.0952380952381, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31644; Mature: 31644
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGM CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCH ETFTYIRKGGFEHRDQMGNVKAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNM HHHHHHHHCCCCHHHHCCCEEEEECCCEEEEECCCCEEECCCCHHHHHCCCCEEEEEEEC PAKDKLRPAKYQDTAGSASVEAANDTGASLKALAGDWGFKDQPQISAAIQGLAGEAAIAD CCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCHHEEE LSLAPNAEATLDLSQHEFVALYLYQGDLSKGEDSQWSPASNQHHQGEFLVLDSQSVLKLK EECCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEE ADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGHIA CCCCCCEEEEECCCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKVLSQFSAKAAMDGDGVNIRRVADFVTTKFDPFLMIDEIKSDDEQDFIGGFPAHPHRGM CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCCCCCCCCH ETFTYIRKGGFEHRDQMGNVKAIRAGDVQWMSTGFGVVHSEMPLADAVDGLHGFQIWVNM HHHHHHHHCCCCHHHHCCCEEEEECCCEEEEECCCCEEECCCCHHHHHCCCCEEEEEEEC PAKDKLRPAKYQDTAGSASVEAANDTGASLKALAGDWGFKDQPQISAAIQGLAGEAAIAD CCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCHHEEE LSLAPNAEATLDLSQHEFVALYLYQGDLSKGEDSQWSPASNQHHQGEFLVLDSQSVLKLK EECCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEE ADERGAGMLLFAGKPIREKIVQMGPFVMNTQAEIQQAIRDYQEGRFGHIA CCCCCCEEEEECCCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]