| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874019
Identifier: 160874019
GI number: 160874019
Start: 1057027
End: 1057488
Strand: Reverse
Name: 160874019
Synonym: Sbal195_0898
Alternate gene names: NA
Gene position: 1057488-1057027 (Counterclockwise)
Preceding gene: 160874020
Following gene: 160874015
Centisome position: 19.78
GC content: 46.97
Gene sequence:
>462_bases ATGGCGGTTTTAACCCAGTTCGACAGTCAACTCTGGCAATGGTGTGATATGAGCTATGCGCAAAACAAAGCGCTCTGCCT CGAATTGCAAAATAGCTGTCAGGTGAACGTCAATCTACTGCTACTGGCACAATATTTAGATATCACTATGGATGTGTCTG GGCCGCAGCAATACAGCACAGAACAATGGCAAACGCTGATGAATGCCGTAGGTGAATGGGATGAAAGATTTCTCATGCCC TACCGCAAATTACGCAAACTCGCTAAGTCCAGCTTGAATGAGCAAGAGTATCAGCAGATGCTCGCCGTTGAGCTGATGAT GGAACGTAAAGCGCAGCGAACCATCTTAAATAAACTCAATGAACTCAGCCCAAGCGGCCAAGCAACGAATCTAGTGAGCT ACTTAAGCCTGTTTGGACTCAGTGACATGGATGCCAACGAAATCGGCTTAATCGCTCCCTGA
Upstream 100 bases:
>100_bases AGAAGAGATAGATGCAATGGAACTTGAGGTCATGGAGCAACAATAACTCCAGCGTTCTTTTACATAAAAGTCAGTAGCAG CGGCAATACAAGGAAATAGT
Downstream 100 bases:
>100_bases TCTAATCCAAACAAATCACGTTAAATCAAGCACAGCTAAGTTAGATCGAGCTCAATCAAATTAACACTATGATCATCTGA GCCGCTAACAGCTGCGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAVLTQFDSQLWQWCDMSYAQNKALCLELQNSCQVNVNLLLLAQYLDITMDVSGPQQYSTEQWQTLMNAVGEWDERFLMP YRKLRKLAKSSLNEQEYQQMLAVELMMERKAQRTILNKLNELSPSGQATNLVSYLSLFGLSDMDANEIGLIAP
Sequences:
>Translated_153_residues MAVLTQFDSQLWQWCDMSYAQNKALCLELQNSCQVNVNLLLLAQYLDITMDVSGPQQYSTEQWQTLMNAVGEWDERFLMP YRKLRKLAKSSLNEQEYQQMLAVELMMERKAQRTILNKLNELSPSGQATNLVSYLSLFGLSDMDANEIGLIAP >Mature_152_residues AVLTQFDSQLWQWCDMSYAQNKALCLELQNSCQVNVNLLLLAQYLDITMDVSGPQQYSTEQWQTLMNAVGEWDERFLMPY RKLRKLAKSSLNEQEYQQMLAVELMMERKAQRTILNKLNELSPSGQATNLVSYLSLFGLSDMDANEIGLIAP
Specific function: Unknown
COG id: COG5589
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17594; Mature: 17463
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLTQFDSQLWQWCDMSYAQNKALCLELQNSCQVNVNLLLLAQYLDITMDVSGPQQYST CCHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCEECHHHHHHHHHHHHHCCCCCCHHCCH EQWQTLMNAVGEWDERFLMPYRKLRKLAKSSLNEQEYQQMLAVELMMERKAQRTILNKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSPSGQATNLVSYLSLFGLSDMDANEIGLIAP HCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AVLTQFDSQLWQWCDMSYAQNKALCLELQNSCQVNVNLLLLAQYLDITMDVSGPQQYST CHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCEECHHHHHHHHHHHHHCCCCCCHHCCH EQWQTLMNAVGEWDERFLMPYRKLRKLAKSSLNEQEYQQMLAVELMMERKAQRTILNKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSPSGQATNLVSYLSLFGLSDMDANEIGLIAP HCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA