| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873987
Identifier: 160873987
GI number: 160873987
Start: 1019539
End: 1020711
Strand: Reverse
Name: 160873987
Synonym: Sbal195_0866
Alternate gene names: NA
Gene position: 1020711-1019539 (Counterclockwise)
Preceding gene: 160873988
Following gene: 160873986
Centisome position: 19.09
GC content: 49.45
Gene sequence:
>1173_bases ATGATGAAAACACTCAGTATTGTATGGGCAGTGGTTGGGTTAATGCTGATCGGCGGCTGCGATAAAACGCCATCTCCCCA AAATACTCAGTCAAAATCGATGGCCAATGTGGTAGGAAAAACCTCGACTAATCAAGATGATTTGGCCTTTATCCCTGTCG TTCCCGGCTATAGATTTGAATTTCCGCGAGATCACTTGGCGCACAATAACTTTCGCCAGGAATGGTGGTATCTGACAGCC AATTTAACTACAGAAACAGGTGAGCAACTCGGTGCCCAGTGGACGCAGTTTAGAGTCGCCCTAAAACCCACAGATCTGCA AGCAACAGATGTGGTTCCTAAAAGTGAATCCACTTGGGCGACTCAGCAGCTTTATTTAGCCCATAGCGCATTAACCTCGA GTAATGCTCACCTCGCCCACGAAAAGTGGTCACGCCGTCATAGCGAGTTTGCCGAAGTAAAATTAGATCCCTATCAAATC CGCCTCGACAACTGGCATTGGCAGAGCCAAACCAATGCACTCTTTCCCGCCACCTTAACGGTGGAGAATCCTGATTTTAG CTACCGACTTCAGCTTAACAGCCAAGCGCCTCTGCAATACCAAGGCGCTAACGGCTATAGCCTTAAAAGTCGCGATGGCC AAGTGGCCTCTTACTATTACAGCCAGCCCTTTATTGAAATCTCAGGTGAAATCAACCGCAATGGCAAAGTGGAGCGAGTC ACAGGCCAAGGCTGGCTCGACAGGGAATGGAGTTCGCAATTTCTGACGAAAACGCAACAGGGTTGGGATTGGTTCGCACT CAGGTTAAACGATGGCTCGACGATGATGTTGTTTCAGTTACGGGATCAGTCGCCAGCAGAGTCCGCAAAGAATACCCCTC TCTCGGCATTTTATAGCGCCAGAAGAATGTTTGCCGATGGTACAGGGCGCAACATCAATTCCACTGACAATCCCAATGAC ATTCAGATGACGCCACTCCAGTGGCAACACACAGTCAATGGCGACTACCCCGTCAGCTGGCAAGTTAAAATCCCCAGCGA GAATATCGATCTCACTATCACCCCGCTCAATCCTAATAGCGCCATGCCATTATCGACGCCCTACTGGGAAGGCCCAGTGC AACTCTCTGGCAGCCATACTGGTACAGGTTATATGGAACTGACGGGCTATTGA
Upstream 100 bases:
>100_bases CAATACTGATTGCCTTAACCACCTGCACCTTAGCCGTGCTCTTACCGCTGTATTGGCAAACTCGCAAACCACTGGTCGCC AGTCTGCAGCAGGAGACCCT
Downstream 100 bases:
>100_bases GCCCAAACATAGTTCTTATAACCAGAAATGCTAAGTCAGCGCGAAGTAACATAACAAGATCGTTATTCAGAGAATGATCT TAAGCTGCTGTTGTATAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MMKTLSIVWAVVGLMLIGGCDKTPSPQNTQSKSMANVVGKTSTNQDDLAFIPVVPGYRFEFPRDHLAHNNFRQEWWYLTA NLTTETGEQLGAQWTQFRVALKPTDLQATDVVPKSESTWATQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLDPYQI RLDNWHWQSQTNALFPATLTVENPDFSYRLQLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGKVERV TGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTMMLFQLRDQSPAESAKNTPLSAFYSARRMFADGTGRNINSTDNPND IQMTPLQWQHTVNGDYPVSWQVKIPSENIDLTITPLNPNSAMPLSTPYWEGPVQLSGSHTGTGYMELTGY
Sequences:
>Translated_390_residues MMKTLSIVWAVVGLMLIGGCDKTPSPQNTQSKSMANVVGKTSTNQDDLAFIPVVPGYRFEFPRDHLAHNNFRQEWWYLTA NLTTETGEQLGAQWTQFRVALKPTDLQATDVVPKSESTWATQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLDPYQI RLDNWHWQSQTNALFPATLTVENPDFSYRLQLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGKVERV TGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTMMLFQLRDQSPAESAKNTPLSAFYSARRMFADGTGRNINSTDNPND IQMTPLQWQHTVNGDYPVSWQVKIPSENIDLTITPLNPNSAMPLSTPYWEGPVQLSGSHTGTGYMELTGY >Mature_390_residues MMKTLSIVWAVVGLMLIGGCDKTPSPQNTQSKSMANVVGKTSTNQDDLAFIPVVPGYRFEFPRDHLAHNNFRQEWWYLTA NLTTETGEQLGAQWTQFRVALKPTDLQATDVVPKSESTWATQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLDPYQI RLDNWHWQSQTNALFPATLTVENPDFSYRLQLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGKVERV TGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTMMLFQLRDQSPAESAKNTPLSAFYSARRMFADGTGRNINSTDNPND IQMTPLQWQHTVNGDYPVSWQVKIPSENIDLTITPLNPNSAMPLSTPYWEGPVQLSGSHTGTGYMELTGY
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44205; Mature: 44205
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTLSIVWAVVGLMLIGGCDKTPSPQNTQSKSMANVVGKTSTNQDDLAFIPVVPGYRFE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC FPRDHLAHNNFRQEWWYLTANLTTETGEQLGAQWTQFRVALKPTDLQATDVVPKSESTWA CCHHHHHCCCCCEEEEEEEEEEECCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHH TQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLDPYQIRLDNWHWQSQTNALFPATLT HHEEEEEHHHHCCCCCCHHHHHHHHHHCCHHEEEECCEEEEECCEEECCCCCEEEEEEEE VENPDFSYRLQLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGKVERV EECCCEEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEECCCEEEEECEECCCCCEEEE TGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTMMLFQLRDQSPAESAKNTPLSAFYSA ECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHCCCCHHHHHHH RRMFADGTGRNINSTDNPNDIQMTPLQWQHTVNGDYPVSWQVKIPSENIDLTITPLNPNS HHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCC AMPLSTPYWEGPVQLSGSHTGTGYMELTGY CCCCCCCCCCCCEEECCCCCCCEEEEEECC >Mature Secondary Structure MMKTLSIVWAVVGLMLIGGCDKTPSPQNTQSKSMANVVGKTSTNQDDLAFIPVVPGYRFE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC FPRDHLAHNNFRQEWWYLTANLTTETGEQLGAQWTQFRVALKPTDLQATDVVPKSESTWA CCHHHHHCCCCCEEEEEEEEEEECCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHH TQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLDPYQIRLDNWHWQSQTNALFPATLT HHEEEEEHHHHCCCCCCHHHHHHHHHHCCHHEEEECCEEEEECCEEECCCCCEEEEEEEE VENPDFSYRLQLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGKVERV EECCCEEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEECCCEEEEECEECCCCCEEEE TGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTMMLFQLRDQSPAESAKNTPLSAFYSA ECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHCCCCHHHHHHH RRMFADGTGRNINSTDNPNDIQMTPLQWQHTVNGDYPVSWQVKIPSENIDLTITPLNPNS HHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCC AMPLSTPYWEGPVQLSGSHTGTGYMELTGY CCCCCCCCCCCCEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA