Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is torS [H]

Identifier: 160873946

GI number: 160873946

Start: 965478

End: 967109

Strand: Reverse

Name: torS [H]

Synonym: Sbal195_0824

Alternate gene names: 160873946

Gene position: 967109-965478 (Counterclockwise)

Preceding gene: 160873948

Following gene: 160873944

Centisome position: 18.09

GC content: 43.87

Gene sequence:

>1632_bases
ATGCTGACATTCTTTAGCCAACTTATCAAAAGTCCCATAGGCAGGCACCTTACCTTGTCTATTGTACTTTTTAGCTCTGT
TATCACCTTAATCACCACTGCCTATCAGTTGATCAGTGATTATCGCAATGACGTTGTGCGCATCGACAGAGTGTTTTCCA
ATATGGAAAAGGTGAACTTAGATGTGCTCGCCGCCAGTATTTGGGTGATTGACGAGCGGCTCATTAACACTCAGCTCAAT
GGCTTAATTCAGTTGCCCGATATTAACTACATTTCGATTAAAGATGACAGCGGCCAAGCGTGGAATGCGGGCGTGCAAAA
GCAAGAACACTCCTTAGATAAAACCTTTCCTTTAGTTTATAAATCCCCGACCGAGAGTATTAATGTCGGCACACTCGAGA
TACAAGTCGATGTCGATGCCATCTATCAGCGCTTGTATGATAAAGCCATTATCATTTTGCTCTCTAACGGAATAAAAACC
TTCTTAGTTGCTGGATTTATTCTGTTTTTAGTATGGTTCAACATCACCAAACACTTAGATAAACTCAGCCAATACTGTAA
AAATATCGACCTAGATCAAGAATACGAGCCTCTGCAATTTGCCCGCCAAGAAAAAATTGATGAGTTTAAACAAGTCGCCG
ACTCCATCAACAGCATGCAAGTGCAACTGAGAAGCTCCTTTGGCGCCTTAAAGAAATCTAAGACTGAACTGCAAACGGCC
CTGGAAGACAGAGAGCGGCTACTCAAACTCGAACGTAGCTATAAAGAAGAACTTGCCAGACAAGTTAAAGAAAGAACCAT
AGAGTTAGAGCAATCCCTCAGTGCGCTAAAACGGGCGCAACAAGTGCTGGTTGAGCAAGAAAAAATGGCGGCCTTGGGAG
GATTGGTGTCAGGTGTTGCCCACGAGATAAACACGCCGATTGGCATTTGTTTAACGGCGGCGAGTGCGCAGCTCTGCCAT
ATTGAAGAGCTGATCGACCTGATCCACAGCGATCAAGCCACTTTAGACGAGATCAATGAGATCCTTAATGAGTATCAAGA
AAGCTGTGAACTCATAGTCCGCAATATCACCAAAGCCAGTAGTTTGATCCAAAAATTCAAAACGATCGCCATTGATCGCA
GTCATGAAGAACACCAACCTTGTAACTTAAGTCAGCAACTCCACGAGATTTTAGAGTCGACATTAATTATGCATCCGCAT
GTCAACGCCGTCACTGAAATCAGCGTAGAGCCCACACTCAATATTCAAACCAATATCAGCTTATTGAATCAGATCGTCAG
CAATATTCTGTCGAACGCCTTTACCCATGCTTTCCAAGGACGTGAAGATAATCTCATCCACATCAGCGCCACTGTGGACG
AAGAGTCGATTCTAATTAGCATTCAAAATAATGGCTTAGAAATTCCAGCCGATGTCGCAGAACACATGTTCGAGCCATTT
TTCACTACGAATCGGAATAAAGGCGGCACGGGCTTAGGATTATCAGCGGCCTTTAATGCCGCGACGCTGTTGAAAGGCAC
TATGAGTTATCGCGCAGACTCAAAACTTGGCTGCCCGCAATTTGATATCAAATTTCCGTACACTCAATGCGAGCCTACGG
TCCTAAATGGCCAACAAGATTTCTATATCTAG

Upstream 100 bases:

>100_bases
GATATTTCGTTGATTTTATTCGCAAGAAAATGCACTTTCTGGATCTGTAGGTCTATGCTTATAAGCATCTCAAGCCGCTA
TTGCATAAAGAAAATTTAAG

Downstream 100 bases:

>100_bases
ATATAACGCAGTGGAATGACACAATATTGCAGTGATACTCACCGCTCATACGAGCGGTGAAATCATCAGTAGAAAAACGT
TAACCCTTTAAAGCGTTTCT

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNLDVLAASIWVIDERLINTQLN
GLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVYKSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKT
FLVAGFILFLVWFNITKHLDKLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA
LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVAHEINTPIGICLTAASAQLCH
IEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKASSLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPH
VNAVTEISVEPTLNIQTNISLLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF
FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQDFYI

Sequences:

>Translated_543_residues
MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNLDVLAASIWVIDERLINTQLN
GLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVYKSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKT
FLVAGFILFLVWFNITKHLDKLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA
LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVAHEINTPIGICLTAASAQLCH
IEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKASSLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPH
VNAVTEISVEPTLNIQTNISLLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF
FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQDFYI
>Mature_543_residues
MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNLDVLAASIWVIDERLINTQLN
GLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVYKSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKT
FLVAGFILFLVWFNITKHLDKLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA
LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVAHEINTPIGICLTAASAQLCH
IEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKASSLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPH
VNAVTEISVEPTLNIQTNISLLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF
FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQDFYI

Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Detects the presence of TMAO in the medium and, in response, activates torR via a four-step phosphorelay. When TMAO is removed,

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87081816, Length=277, Percent_Identity=27.0758122743682, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1788549, Length=225, Percent_Identity=29.7777777777778, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR008207
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR014302
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 61225; Mature: 61225

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVLAASIWVIDERLINTQLNGLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVY
HHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCEEE
KSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKTFLVAGFILFLVWFNITKHLD
CCCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
KLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEINTPIGICLTAASAQLCHIEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKAS
HHHCCCHHHEEHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPHVNAVTEISVEPTLNIQTNIS
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEECCCCEEEEHHHH
LLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHCCH
FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQD
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEECCCCC
FYI
CCC
>Mature Secondary Structure
MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVLAASIWVIDERLINTQLNGLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVY
HHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCEEE
KSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKTFLVAGFILFLVWFNITKHLD
CCCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
KLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HEINTPIGICLTAASAQLCHIEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKAS
HHHCCCHHHEEHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPHVNAVTEISVEPTLNIQTNIS
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEECCCCEEEEHHHH
LLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHCCH
FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQD
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEECCCCC
FYI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]