| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is torS [H]
Identifier: 160873946
GI number: 160873946
Start: 965478
End: 967109
Strand: Reverse
Name: torS [H]
Synonym: Sbal195_0824
Alternate gene names: 160873946
Gene position: 967109-965478 (Counterclockwise)
Preceding gene: 160873948
Following gene: 160873944
Centisome position: 18.09
GC content: 43.87
Gene sequence:
>1632_bases ATGCTGACATTCTTTAGCCAACTTATCAAAAGTCCCATAGGCAGGCACCTTACCTTGTCTATTGTACTTTTTAGCTCTGT TATCACCTTAATCACCACTGCCTATCAGTTGATCAGTGATTATCGCAATGACGTTGTGCGCATCGACAGAGTGTTTTCCA ATATGGAAAAGGTGAACTTAGATGTGCTCGCCGCCAGTATTTGGGTGATTGACGAGCGGCTCATTAACACTCAGCTCAAT GGCTTAATTCAGTTGCCCGATATTAACTACATTTCGATTAAAGATGACAGCGGCCAAGCGTGGAATGCGGGCGTGCAAAA GCAAGAACACTCCTTAGATAAAACCTTTCCTTTAGTTTATAAATCCCCGACCGAGAGTATTAATGTCGGCACACTCGAGA TACAAGTCGATGTCGATGCCATCTATCAGCGCTTGTATGATAAAGCCATTATCATTTTGCTCTCTAACGGAATAAAAACC TTCTTAGTTGCTGGATTTATTCTGTTTTTAGTATGGTTCAACATCACCAAACACTTAGATAAACTCAGCCAATACTGTAA AAATATCGACCTAGATCAAGAATACGAGCCTCTGCAATTTGCCCGCCAAGAAAAAATTGATGAGTTTAAACAAGTCGCCG ACTCCATCAACAGCATGCAAGTGCAACTGAGAAGCTCCTTTGGCGCCTTAAAGAAATCTAAGACTGAACTGCAAACGGCC CTGGAAGACAGAGAGCGGCTACTCAAACTCGAACGTAGCTATAAAGAAGAACTTGCCAGACAAGTTAAAGAAAGAACCAT AGAGTTAGAGCAATCCCTCAGTGCGCTAAAACGGGCGCAACAAGTGCTGGTTGAGCAAGAAAAAATGGCGGCCTTGGGAG GATTGGTGTCAGGTGTTGCCCACGAGATAAACACGCCGATTGGCATTTGTTTAACGGCGGCGAGTGCGCAGCTCTGCCAT ATTGAAGAGCTGATCGACCTGATCCACAGCGATCAAGCCACTTTAGACGAGATCAATGAGATCCTTAATGAGTATCAAGA AAGCTGTGAACTCATAGTCCGCAATATCACCAAAGCCAGTAGTTTGATCCAAAAATTCAAAACGATCGCCATTGATCGCA GTCATGAAGAACACCAACCTTGTAACTTAAGTCAGCAACTCCACGAGATTTTAGAGTCGACATTAATTATGCATCCGCAT GTCAACGCCGTCACTGAAATCAGCGTAGAGCCCACACTCAATATTCAAACCAATATCAGCTTATTGAATCAGATCGTCAG CAATATTCTGTCGAACGCCTTTACCCATGCTTTCCAAGGACGTGAAGATAATCTCATCCACATCAGCGCCACTGTGGACG AAGAGTCGATTCTAATTAGCATTCAAAATAATGGCTTAGAAATTCCAGCCGATGTCGCAGAACACATGTTCGAGCCATTT TTCACTACGAATCGGAATAAAGGCGGCACGGGCTTAGGATTATCAGCGGCCTTTAATGCCGCGACGCTGTTGAAAGGCAC TATGAGTTATCGCGCAGACTCAAAACTTGGCTGCCCGCAATTTGATATCAAATTTCCGTACACTCAATGCGAGCCTACGG TCCTAAATGGCCAACAAGATTTCTATATCTAG
Upstream 100 bases:
>100_bases GATATTTCGTTGATTTTATTCGCAAGAAAATGCACTTTCTGGATCTGTAGGTCTATGCTTATAAGCATCTCAAGCCGCTA TTGCATAAAGAAAATTTAAG
Downstream 100 bases:
>100_bases ATATAACGCAGTGGAATGACACAATATTGCAGTGATACTCACCGCTCATACGAGCGGTGAAATCATCAGTAGAAAAACGT TAACCCTTTAAAGCGTTTCT
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNLDVLAASIWVIDERLINTQLN GLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVYKSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKT FLVAGFILFLVWFNITKHLDKLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVAHEINTPIGICLTAASAQLCH IEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKASSLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPH VNAVTEISVEPTLNIQTNISLLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQDFYI
Sequences:
>Translated_543_residues MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNLDVLAASIWVIDERLINTQLN GLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVYKSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKT FLVAGFILFLVWFNITKHLDKLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVAHEINTPIGICLTAASAQLCH IEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKASSLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPH VNAVTEISVEPTLNIQTNISLLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQDFYI >Mature_543_residues MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNLDVLAASIWVIDERLINTQLN GLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVYKSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKT FLVAGFILFLVWFNITKHLDKLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVAHEINTPIGICLTAASAQLCH IEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKASSLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPH VNAVTEISVEPTLNIQTNISLLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQDFYI
Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Detects the presence of TMAO in the medium and, in response, activates torR via a four-step phosphorelay. When TMAO is removed,
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=277, Percent_Identity=27.0758122743682, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1788549, Length=225, Percent_Identity=29.7777777777778, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014302 - InterPro: IPR001789 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61225; Mature: 61225
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNL CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVLAASIWVIDERLINTQLNGLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVY HHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCEEE KSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKTFLVAGFILFLVWFNITKHLD CCCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH KLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEINTPIGICLTAASAQLCHIEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKAS HHHCCCHHHEEHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPHVNAVTEISVEPTLNIQTNIS HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEECCCCEEEEHHHH LLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHCCH FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQD HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEECCCCC FYI CCC >Mature Secondary Structure MLTFFSQLIKSPIGRHLTLSIVLFSSVITLITTAYQLISDYRNDVVRIDRVFSNMEKVNL CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVLAASIWVIDERLINTQLNGLIQLPDINYISIKDDSGQAWNAGVQKQEHSLDKTFPLVY HHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCEEE KSPTESINVGTLEIQVDVDAIYQRLYDKAIIILLSNGIKTFLVAGFILFLVWFNITKHLD CCCCCCCCEEEEEEEECHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH KLSQYCKNIDLDQEYEPLQFARQEKIDEFKQVADSINSMQVQLRSSFGALKKSKTELQTA HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEDRERLLKLERSYKEELARQVKERTIELEQSLSALKRAQQVLVEQEKMAALGGLVSGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEINTPIGICLTAASAQLCHIEELIDLIHSDQATLDEINEILNEYQESCELIVRNITKAS HHHCCCHHHEEHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLIQKFKTIAIDRSHEEHQPCNLSQQLHEILESTLIMHPHVNAVTEISVEPTLNIQTNIS HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEECCCCEEEEHHHH LLNQIVSNILSNAFTHAFQGREDNLIHISATVDEESILISIQNNGLEIPADVAEHMFEPF HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHCCH FTTNRNKGGTGLGLSAAFNAATLLKGTMSYRADSKLGCPQFDIKFPYTQCEPTVLNGQQD HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEECCCCC FYI CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]