| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873916
Identifier: 160873916
GI number: 160873916
Start: 932328
End: 932633
Strand: Direct
Name: 160873916
Synonym: Sbal195_0794
Alternate gene names: NA
Gene position: 932328-932633 (Clockwise)
Preceding gene: 160873915
Following gene: 160873919
Centisome position: 17.44
GC content: 44.12
Gene sequence:
>306_bases ATGAGTCGTTTACTTAAGTCACTGCATAATACCGCCAAAGGCTTGCATGATGCGGGTGTCATGAAAACATCGACCATGCG TGAATTTGACGAACTTTGCTTACCTGAAATCAAAGTACTAACAGCTGCGGAAATTAAGCGCATTAGAGTCGCGAATAATG TCAGCCAGCCTGTATTTGCCCATTGCTTAAATGTTTCAGTATCCAGTGTGCAAAAGTGGGAACAAGGCACAAGGCATCCT GACGGTCCTGCCTTGACGCTGCTAAATCTCGTTAAAAAACAAGGTATGTCTTTGCTGATGGCTTGA
Upstream 100 bases:
>100_bases TGGCTAAAGAGTTTTTTGCTTACGATGATAAAGCATTGATTAAAGCTATAAAAGCCAAAGCACTGTATGAGATTAAACAA GATGTATGAGGTCAACTAAA
Downstream 100 bases:
>100_bases TGTATCGCATAAATTAAGTGCAAACAAAAAATGGCTACTCAATGTAGCCATTTTTTATGGGCGTTTAACTGTCACTTTAC CCTAGTCGTGCTTGTTCGCG
Product: DNA-binding protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator-Related Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKWEQGTRHP DGPALTLLNLVKKQGMSLLMA
Sequences:
>Translated_101_residues MSRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKWEQGTRHP DGPALTLLNLVKKQGMSLLMA >Mature_100_residues SRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKWEQGTRHPD GPALTLLNLVKKQGMSLLMA
Specific function: Unknown
COG id: COG2944
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11151; Mature: 11020
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHH HCLNVSVSSVQKWEQGTRHPDGPALTLLNLVKKQGMSLLMA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHH HCLNVSVSSVQKWEQGTRHPDGPALTLLNLVKKQGMSLLMA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA