Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160873916

Identifier: 160873916

GI number: 160873916

Start: 932328

End: 932633

Strand: Direct

Name: 160873916

Synonym: Sbal195_0794

Alternate gene names: NA

Gene position: 932328-932633 (Clockwise)

Preceding gene: 160873915

Following gene: 160873919

Centisome position: 17.44

GC content: 44.12

Gene sequence:

>306_bases
ATGAGTCGTTTACTTAAGTCACTGCATAATACCGCCAAAGGCTTGCATGATGCGGGTGTCATGAAAACATCGACCATGCG
TGAATTTGACGAACTTTGCTTACCTGAAATCAAAGTACTAACAGCTGCGGAAATTAAGCGCATTAGAGTCGCGAATAATG
TCAGCCAGCCTGTATTTGCCCATTGCTTAAATGTTTCAGTATCCAGTGTGCAAAAGTGGGAACAAGGCACAAGGCATCCT
GACGGTCCTGCCTTGACGCTGCTAAATCTCGTTAAAAAACAAGGTATGTCTTTGCTGATGGCTTGA

Upstream 100 bases:

>100_bases
TGGCTAAAGAGTTTTTTGCTTACGATGATAAAGCATTGATTAAAGCTATAAAAGCCAAAGCACTGTATGAGATTAAACAA
GATGTATGAGGTCAACTAAA

Downstream 100 bases:

>100_bases
TGTATCGCATAAATTAAGTGCAAACAAAAAATGGCTACTCAATGTAGCCATTTTTTATGGGCGTTTAACTGTCACTTTAC
CCTAGTCGTGCTTGTTCGCG

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator-Related Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKWEQGTRHP
DGPALTLLNLVKKQGMSLLMA

Sequences:

>Translated_101_residues
MSRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKWEQGTRHP
DGPALTLLNLVKKQGMSLLMA
>Mature_100_residues
SRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFAHCLNVSVSSVQKWEQGTRHPD
GPALTLLNLVKKQGMSLLMA

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11151; Mature: 11020

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHH
HCLNVSVSSVQKWEQGTRHPDGPALTLLNLVKKQGMSLLMA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRLLKSLHNTAKGLHDAGVMKTSTMREFDELCLPEIKVLTAAEIKRIRVANNVSQPVFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHH
HCLNVSVSSVQKWEQGTRHPDGPALTLLNLVKKQGMSLLMA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA