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The map label for this gene is nohA [H]

Identifier: 160873905

GI number: 160873905

Start: 922995

End: 923528

Strand: Direct

Name: nohA [H]

Synonym: Sbal195_0783

Alternate gene names: 160873905

Gene position: 922995-923528 (Clockwise)

Preceding gene: 160873904

Following gene: 160873906

Centisome position: 17.26

GC content: 48.69

Gene sequence:

>534_bases
ATGGCCCGCATTCAACCATCACCACCCGAGCCTGTTCTACTGAGTAAAACCGACCTATGCAAAAGCCTTGAGATCAGCAC
CCAAGCGTTTGATAAGTGGGACGTGCCAGTGCACAGCAAGCTCGGTCGCGTGTGTTTATACAAAATGGCCGATGTGGTGG
GTAACAGACTTGCCAACGAGCGCAAAAAAACCATCACTAAACCCGATGAAGATGATCCCGATAAGCCAGATATGGACTAC
GAACGCTGGCGCTTAATCCGAGCCCAAGCAGTTGGGCAGGAGATTAAAAACGAAAAAGACCTCAAAGAAGTGGTCGAAGT
TAATTTTGCTACCTTTGTGCTAAATCGCATTGCTGCGCAAATTGCCCCAGTGCTCGATCAAATACACATACGGGTAAAAC
GCAAATTCCCCGACATTCCAGAACGCACAATCGACGCTATCAAAGCGGAGGTGATTAAAAGCCAAAACACCGCCGCCGAT
CTTGCGGAGGGCATTGAGGGTTTATTAGATGAGTATATCGGCCGCGCAGATTAA

Upstream 100 bases:

>100_bases
GAGTGTCGCCAAGAACTAAAAGACGAAAAGCGCAAACAAGAACTTCACGCCGCCGACATGCAACTGAAAGCCGCCCTGCT
AAAACAAGTGGAGCATCCTA

Downstream 100 bases:

>100_bases
AAATCTGAAAGCCGCCGTTGCTGCTGGGCTGCGTTCGTTCTATCGCCCACCCATGCTCACCTGTTCTGAATATGCCGACG
AGCACTTTTACATGTCGTCG

Product: phage DNA packaging Nu1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MARIQPSPPEPVLLSKTDLCKSLEISTQAFDKWDVPVHSKLGRVCLYKMADVVGNRLANERKKTITKPDEDDPDKPDMDY
ERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIAAQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAAD
LAEGIEGLLDEYIGRAD

Sequences:

>Translated_177_residues
MARIQPSPPEPVLLSKTDLCKSLEISTQAFDKWDVPVHSKLGRVCLYKMADVVGNRLANERKKTITKPDEDDPDKPDMDY
ERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIAAQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAAD
LAEGIEGLLDEYIGRAD
>Mature_176_residues
ARIQPSPPEPVLLSKTDLCKSLEISTQAFDKWDVPVHSKLGRVCLYKMADVVGNRLANERKKTITKPDEDDPDKPDMDYE
RWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIAAQIAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADL
AEGIEGLLDEYIGRAD

Specific function: Unknown

COG id: COG4220

COG function: function code L; Phage DNA packaging protein, Nu1 subunit of terminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To phage lambda DNA packaging protein NU1 [H]

Homologues:

Organism=Escherichia coli, GI1786773, Length=109, Percent_Identity=49.5412844036697, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010906
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07471 Phage_Nu1 [H]

EC number: NA

Molecular weight: Translated: 20061; Mature: 19930

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIQPSPPEPVLLSKTDLCKSLEISTQAFDKWDVPVHSKLGRVCLYKMADVVGNRLANE
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RKKTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIAAQ
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYIGRAD
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARIQPSPPEPVLLSKTDLCKSLEISTQAFDKWDVPVHSKLGRVCLYKMADVVGNRLANE
CCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RKKTITKPDEDDPDKPDMDYERWRLIRAQAVGQEIKNEKDLKEVVEVNFATFVLNRIAAQ
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IAPVLDQIHIRVKRKFPDIPERTIDAIKAEVIKSQNTAADLAEGIEGLLDEYIGRAD
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1630906 [H]