Click here to switch to the map view.

The map label for this gene is bfrD [H]

Identifier: 160873871

GI number: 160873871

Start: 899802

End: 901994

Strand: Direct

Name: bfrD [H]

Synonym: Sbal195_0749

Alternate gene names: 160873871

Gene position: 899802-901994 (Clockwise)

Preceding gene: 160873869

Following gene: 160873872

Centisome position: 16.83

GC content: 46.1

Gene sequence:

>2193_bases
ATGAAATTTGCAAAACGCCGCAATGGCCGAGTCGCACTCGGCGCCCATGTTTTAGGTTCATTAACTATAGGTATGGCTAT
ATCAGCTACCCCTGCGATAGCAGCGGATCAGGCACAAGTCGCTGGTAAGAAAGTCGAACATATTGAGGTTAACGGCGAAT
ATTTGGGCTACAACACGCGCAAAGTACAATCCGGTAAATTTACTGATGATCTGCTCAATAGCGCTAAAACGGTCACTGTG
ATTAATCAAGATCTGATCAAAGACATGGGGGCACAAAGTTTTACTGATGCTCTGCGTGCAACACCTGGTATTACGCTTGG
TACAGGTGAAGGTGGTAATCCCTATGGTGACAGGCCGTTTATTCGTGGTTATGACGCTCAATCTTCAACGTTTATTAACG
GTATGCGGGATGTGGGCTCCCAGAGCCGTGAGACTTTTAACATCGAACAAATTGAGGTGCTAAAGGGGCCAAGCTCTGTT
TATAACGGCCGTGGTGCTGTTGGTGGCAGCATCAATATTGTGACTAAAAAAGCCCAAGCTGAAGATTTTATTAATGCGGA
TGTGGCAATTGGTACTGATGCTTTAAAACGCGCCAGCCTTGACGTTAACCATGTAATTGCAGATGAAGCTGCCGTGCGGG
TGAATCTAATGGCGCACGATGCCAATACGCCGGGTCGTGATGAAGTTTCTGGTAATCGCTGGGGCATTGCACCCTCGGTG
ACCTTTGGCTTGACGACACCCACTAAGGTGACGTTGGAATACTATCATTTTGAAAACAATGACATACCTGACTATGGGAT
CCCCTATGATCAAGCGACAGGTAGGCCTGCCGATGTTGATCCCAATAACTTCTATGGCTTATTGTCGCGGGATTTTCGCG
ATAATAATGACGACACAGCTTCAGTGCTGATAAGCCATGACTTTAGCAATGACATGCAATTTACGTCGACCTCAGTGTAT
AGCCGTAATACCAATTATTACATTGTGACCAACCCAGATGACACGACAGGCAATGTCGCCAATGGTTATGTATGGCGTAA
CACTAAATCACGCCATTCAGTCACTAAAACGCTCGCGACCCAATTACAACTGGCGGGTGAGGCTAAACTGGCTGGATTCA
CCAACCGTTTTGCGATTGGCACTGAATTTAGCAACGAGCGCACCAGTAACTTAAGTTATACGGTCGATACTGGTAATGGT
CGTAATGCGGGTTGTAATGATGCACTACTGGCTAATTACAATTGTACTTTGCTATCGAAGCCTAATCCTCACGACCCTTG
GGTCGGCAGCGTGACGCTAGGGACAGATGCCACTGTGACTGAAACGGACACTCGCTCAGTTTATGCCTTTAATACCATAG
AGTTGAATGAGTCTTGGATGATTAACGGCGGCGTGCGCTGGGATGATTACAGCACTGCTGTACAGAACTCGACTTCGTCA
CTATCCAATGACGATGATTTTTTAAACTACCAACTATCAGTGCTGTATAAACCTGCGGTCAACGGCAGTATCTATGCGGC
GTGGGGCACATCTTCGAATCCGCCAGGGACATCTAATGGCGATGGTTCAGATCGTCTTGGAAGTAACAATGAAGATTTAA
AGCCTGAAGATACTGAAAGTTACGAGCTAGGTACTAAGTGGGATTTCTTTAGTGGCCGCTTATCGCTTAATGGTTCAGTA
TTCCAAATCGAGAAGAACAACGCTCGCGTTGCGACTTCTGCCGATCGCAATTCACCGCAAGAAAACGTCGGTGAGCAGAA
AGTGAAGGGCTTCGAAATTGGTTTTTCAGGTGATATCACTGAGCATTGGCATGGATTTGGTGGATACACCTATCTTGATG
CTAGCCTAGAAAGTAACGGATTTAATGCCGCTTATGATGGCAATCGTTTCCCTAATACGGCCAAAAACAGCATCAGTCTG
TTTACCACTTACGACATTACGGAACAGTTAAATGTCGGAACTGGCGCGTATTACATGGGACAGGTTTACGGTAATACCGC
CAATACCTTATCGATTCCTTCATACTGGCGTTTTGATGTGGTTTCATCTTACAAGATGAATGACTTTCTGACGCTGCGCT
TGAATGTGCAAAACCTCACTGACGAGCGTTACTATGATAAAGCCTACACTGCGCATTTTGCTAACATGGCGCCCGGACGT
TTGGTCATGCTCAGTGCCGATATGCATTTTTAA

Upstream 100 bases:

>100_bases
ATAGTTATTGATCAGTTTGTGCGATTTCCTTATATTAGCGGGCGATTAACAGGTGGGGGACATCTGTTACAGGGTTTAGT
CCGCAACAGGAATGCTTTTA

Downstream 100 bases:

>100_bases
TGTCAGTCATTAGTTAATGTTACGGCAGCCCTCGGGCTGCCTTTTATGTTTTATAAACGGTATACGTCATGCCGTGTTTT
TTGCCCTATGGAACCCAGAG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 730; Mature: 730

Protein sequence:

>730_residues
MKFAKRRNGRVALGAHVLGSLTIGMAISATPAIAADQAQVAGKKVEHIEVNGEYLGYNTRKVQSGKFTDDLLNSAKTVTV
INQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPFIRGYDAQSSTFINGMRDVGSQSRETFNIEQIEVLKGPSSV
YNGRGAVGGSINIVTKKAQAEDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
TFGLTTPTKVTLEYYHFENNDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTASVLISHDFSNDMQFTSTSVY
SRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLATQLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNG
RNAGCNDALLANYNCTLLSKPNPHDPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAVQNSTSS
LSNDDDFLNYQLSVLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTESYELGTKWDFFSGRLSLNGSV
FQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDITEHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISL
FTTYDITEQLNVGTGAYYMGQVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
LVMLSADMHF

Sequences:

>Translated_730_residues
MKFAKRRNGRVALGAHVLGSLTIGMAISATPAIAADQAQVAGKKVEHIEVNGEYLGYNTRKVQSGKFTDDLLNSAKTVTV
INQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPFIRGYDAQSSTFINGMRDVGSQSRETFNIEQIEVLKGPSSV
YNGRGAVGGSINIVTKKAQAEDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
TFGLTTPTKVTLEYYHFENNDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTASVLISHDFSNDMQFTSTSVY
SRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLATQLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNG
RNAGCNDALLANYNCTLLSKPNPHDPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAVQNSTSS
LSNDDDFLNYQLSVLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTESYELGTKWDFFSGRLSLNGSV
FQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDITEHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISL
FTTYDITEQLNVGTGAYYMGQVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
LVMLSADMHF
>Mature_730_residues
MKFAKRRNGRVALGAHVLGSLTIGMAISATPAIAADQAQVAGKKVEHIEVNGEYLGYNTRKVQSGKFTDDLLNSAKTVTV
INQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPFIRGYDAQSSTFINGMRDVGSQSRETFNIEQIEVLKGPSSV
YNGRGAVGGSINIVTKKAQAEDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
TFGLTTPTKVTLEYYHFENNDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTASVLISHDFSNDMQFTSTSVY
SRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLATQLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNG
RNAGCNDALLANYNCTLLSKPNPHDPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAVQNSTSS
LSNDDDFLNYQLSVLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTESYELGTKWDFFSGRLSLNGSV
FQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDITEHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISL
FTTYDITEQLNVGTGAYYMGQVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
LVMLSADMHF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=783, Percent_Identity=31.8007662835249, Blast_Score=327, Evalue=2e-90,
Organism=Escherichia coli, GI1786344, Length=767, Percent_Identity=23.0769230769231, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1787344, Length=676, Percent_Identity=22.3372781065089, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787723, Length=180, Percent_Identity=30.5555555555556, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79751; Mature: 79751

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAKRRNGRVALGAHVLGSLTIGMAISATPAIAADQAQVAGKKVEHIEVNGEYLGYNTR
CCCCCCCCCCEEEEHHHHHHEEEEEEEECCCCCCCCCHHHCCCEEEEEEECCEEECCCCE
KVQSGKFTDDLLNSAKTVTVINQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPF
EECCCCCHHHHHCCCEEEEEECHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCE
IRGYDAQSSTFINGMRDVGSQSRETFNIEQIEVLKGPSSVYNGRGAVGGSINIVTKKAQA
EECCCCCCCHHHHHHHHCCCCCCCEECCEEEEEECCCHHHCCCCCCCCCEEEEEEECCHH
EDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
HHHCCCCEEECHHHHHHCCCCHHEEECCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCE
TFGLTTPTKVTLEYYHFENNDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTA
EEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEE
SVLISHDFSNDMQFTSTSVYSRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLAT
EEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHH
QLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNGRNAGCNDALLANYNCTLLSK
HHHHCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCEEEECC
PNPHDPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAVQNSTSS
CCCCCCCEEEEEECCCCEEEECCCCEEEEEEEEEECCCEEEECCEEECCHHHHHHCCCCC
LSNDDDFLNYQLSVLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTES
CCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YELGTKWDFFSGRLSLNGSVFQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDIT
EECCCEEEEECCEEEECCCEEEEECCCCEEEECCCCCCCHHHHCHHHCCEEEECCCCCCH
EHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISLFTTYDITEQLNVGTGAYYMG
HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEE
QVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
EEECCCCCEEECCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCE
LVMLSADMHF
EEEEECCCCC
>Mature Secondary Structure
MKFAKRRNGRVALGAHVLGSLTIGMAISATPAIAADQAQVAGKKVEHIEVNGEYLGYNTR
CCCCCCCCCCEEEEHHHHHHEEEEEEEECCCCCCCCCHHHCCCEEEEEEECCEEECCCCE
KVQSGKFTDDLLNSAKTVTVINQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPF
EECCCCCHHHHHCCCEEEEEECHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCE
IRGYDAQSSTFINGMRDVGSQSRETFNIEQIEVLKGPSSVYNGRGAVGGSINIVTKKAQA
EECCCCCCCHHHHHHHHCCCCCCCEECCEEEEEECCCHHHCCCCCCCCCEEEEEEECCHH
EDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
HHHCCCCEEECHHHHHHCCCCHHEEECCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCE
TFGLTTPTKVTLEYYHFENNDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTA
EEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEE
SVLISHDFSNDMQFTSTSVYSRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLAT
EEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHH
QLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNGRNAGCNDALLANYNCTLLSK
HHHHCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCEEEECC
PNPHDPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAVQNSTSS
CCCCCCCEEEEEECCCCEEEECCCCEEEEEEEEEECCCEEEECCEEECCHHHHHHCCCCC
LSNDDDFLNYQLSVLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTES
CCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YELGTKWDFFSGRLSLNGSVFQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDIT
EECCCEEEEECCEEEECCCEEEEECCCCEEEECCCCCCCHHHHCHHHCCEEEECCCCCCH
EHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISLFTTYDITEQLNVGTGAYYMG
HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEE
QVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
EEECCCCCEEECCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCE
LVMLSADMHF
EEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]