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The map label for this gene is 160873811

Identifier: 160873811

GI number: 160873811

Start: 836012

End: 836671

Strand: Reverse

Name: 160873811

Synonym: Sbal195_0689

Alternate gene names: NA

Gene position: 836671-836012 (Counterclockwise)

Preceding gene: 160873812

Following gene: 160873810

Centisome position: 15.65

GC content: 44.7

Gene sequence:

>660_bases
ATGCTCATGGATAGAGGCGTGCTGGTACGCTGGAACGATGAAAAGGGATTTGGCTTTATTCAGCCTGAAAAAAACGCAGC
CCAAGATGTGTTTATTCACATTTCAGTGCTGAAAAAGATGGCGAGAAAACCCATAGTGGGCGACAGCATTCTGTTTCAAA
CTGAAGTGCAAAATGACGGCAAAAGAAAAGCGGTTATCGCCTCGATTGAAGGCGTCGCTGTGGTAGCAGCAAGCTCAGCG
CCACGCACCGATTCCCACTCTCATGTCCAATCACGCAATGAAAACTTCAACTTCAATAACAAAAACAAAGCCCATTACCA
TAGCCCACGAAAATCTTCCTTTAATACGATAATCCCGCTGCTAATAATCGTTGCCATAGTTATATTTGGCTTTAAACAAT
ACCAAGAATTTAATGAAGCTCCTGCAATCGATGAAGTACCAGTCCTCACTAATGAGGACATTCAGGGAATGCCAATGTAT
GAAACTAAAGTGAGAACTCAAACACCTGCAACGCCAAGATTCCAATGTGAAGCGGGTAAAACCCATTGCAGCCACATGAG
TTCCTGCGCAGAAGCGACATTCTATATCCAACATTGCCCCAATACTCAAATGGATGGTGACAATGATGGCATTCCCTGCG
AGCGCCAGTGGTGCAGTTAG

Upstream 100 bases:

>100_bases
CGCTAAAGTCATCGTTTTAATTTCTTTAATATCCAACATAATAATTGTCATCTCCATGATCATTTACTTCTTCACTCACT
AACAATTAAGGACATAGAAA

Downstream 100 bases:

>100_bases
CGATGCGACATATGATGAGCAGGTAGCAGGTAGCGAAATGATAAATAATCTAAAACAATGGCTAAATCGTCTAACAGACA
TACAGCAAATCGGAGTGATT

Product: cold-shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: Cold Shock Domain-Contain Protein; Cold-Shock Protein; Excalibur Domain Protein; Cold Shock Family Protein; Cold Shock/Excaliber Domain-Containing Protein CspD

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLMDRGVLVRWNDEKGFGFIQPEKNAAQDVFIHISVLKKMARKPIVGDSILFQTEVQNDGKRKAVIASIEGVAVVAASSA
PRTDSHSHVQSRNENFNFNNKNKAHYHSPRKSSFNTIIPLLIIVAIVIFGFKQYQEFNEAPAIDEVPVLTNEDIQGMPMY
ETKVRTQTPATPRFQCEAGKTHCSHMSSCAEATFYIQHCPNTQMDGDNDGIPCERQWCS

Sequences:

>Translated_219_residues
MLMDRGVLVRWNDEKGFGFIQPEKNAAQDVFIHISVLKKMARKPIVGDSILFQTEVQNDGKRKAVIASIEGVAVVAASSA
PRTDSHSHVQSRNENFNFNNKNKAHYHSPRKSSFNTIIPLLIIVAIVIFGFKQYQEFNEAPAIDEVPVLTNEDIQGMPMY
ETKVRTQTPATPRFQCEAGKTHCSHMSSCAEATFYIQHCPNTQMDGDNDGIPCERQWCS
>Mature_219_residues
MLMDRGVLVRWNDEKGFGFIQPEKNAAQDVFIHISVLKKMARKPIVGDSILFQTEVQNDGKRKAVIASIEGVAVVAASSA
PRTDSHSHVQSRNENFNFNNKNKAHYHSPRKSSFNTIIPLLIIVAIVIFGFKQYQEFNEAPAIDEVPVLTNEDIQGMPMY
ETKVRTQTPATPRFQCEAGKTHCSHMSSCAEATFYIQHCPNTQMDGDNDGIPCERQWCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24601; Mature: 24601

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMDRGVLVRWNDEKGFGFIQPEKNAAQDVFIHISVLKKMARKPIVGDSILFQTEVQNDG
CCCCCCEEEEECCCCCCEEECCCCCCCHHHEEHHHHHHHHHHCCCCCCCEEEEEECCCCC
KRKAVIASIEGVAVVAASSAPRTDSHSHVQSRNENFNFNNKNKAHYHSPRKSSFNTIIPL
CCEEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LIIVAIVIFGFKQYQEFNEAPAIDEVPVLTNEDIQGMPMYETKVRTQTPATPRFQCEAGK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCC
THCSHMSSCAEATFYIQHCPNTQMDGDNDGIPCERQWCS
HHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLMDRGVLVRWNDEKGFGFIQPEKNAAQDVFIHISVLKKMARKPIVGDSILFQTEVQNDG
CCCCCCEEEEECCCCCCEEECCCCCCCHHHEEHHHHHHHHHHCCCCCCCEEEEEECCCCC
KRKAVIASIEGVAVVAASSAPRTDSHSHVQSRNENFNFNNKNKAHYHSPRKSSFNTIIPL
CCEEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LIIVAIVIFGFKQYQEFNEAPAIDEVPVLTNEDIQGMPMYETKVRTQTPATPRFQCEAGK
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCC
THCSHMSSCAEATFYIQHCPNTQMDGDNDGIPCERQWCS
HHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA