| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is galM [H]
Identifier: 160873782
GI number: 160873782
Start: 803328
End: 804362
Strand: Reverse
Name: galM [H]
Synonym: Sbal195_0660
Alternate gene names: 160873782
Gene position: 804362-803328 (Counterclockwise)
Preceding gene: 160873783
Following gene: 160873779
Centisome position: 15.04
GC content: 50.63
Gene sequence:
>1035_bases ATGGTACGTTTCAGTGTTTTGGATCCTTGGACCGATCCCCGCGGCGGCGAAATCGAACGGGTTCGGATCGACAATGGCAT ACTCGCATTAGAAGTCATCAGCTTAGGCGGAATTATCCGTGCTCTGTGGACCCCAGATAAACACGGCGAACGAGCCAATA TCGTCCTTGGTTGCGACAGCGCCGAAGACTACCTGACGCAATCGGCTCACTTAGGCGCCATTGCTGGCCGCTTTGCGAAT CGTATCGCTAACGGCAAAATGCACTATCAAGGTCAAGATTATCAACTCGATGTCAACCAAGCGACTAACTGTTTGCATGG CGGCCGTGAAGGGTTTAACCGTAAAAACTGGCACTTAGGCCAACTGCCCGATGGTGTGCGCTTGACCTTAATGAGTCCAG ACGGCGACATGGGTTTCCCCGGTAATTGCACGGTTCAGCTGGATTATCGCCTCGCAGGCAATAATCTCTATGTGGAAATT TTAGCTTCGGTGGATAAAGCCTGTCCCGTGAGCTTAACCCAGCACAGTTATTTCAACCTCGATGGTTCAGAGACCAATCA CGAGCATTTGATGCAAATCGATGCCAAGCGTTATCTCACCATGAATGATGTCAGTGTTCCCACTGGGATTGCCGAGACTG CAGGATCGATTTTCGACTTGAGTCAGCCGATACGCTTAGGCGACAAACTGCATGCCGCTGAATTGGCGAACACGCGCGGT TATGATCACTGTTATATGATGAATGACCCCGACGGTTCACTCGCCCGCTTTGGCTGTTTAAGTAGTCCTGTGAGTGGCCG CGCTATGACGGTTTATACCAATCAACCGAGCGTGCAGCTCTACTGCGCTAACTTTTTAGATGGCACTGTGGGTCGCAATC AACAGGTATTAAATCAACATCATGGCGTGTGTTTAGAACCGCAGATGCTGCCAGACTCACCGAATCAAGGCGAGCGCTTT GGTGATGATGTTTGGTTAGTGCCAGGCAAGGTTTATCACCACATCAGCCGATATCAGTTCGATGCCGATGCGTAA
Upstream 100 bases:
>100_bases ATTCATCGCTGAACTTTATGGTGTTGATGGCAAACAATAGGGTTAACATACTCATTTAACACAATAAGCAGTGAGCATAT TCAACACAGAGGGAAGCTAA
Downstream 100 bases:
>100_bases CATTAGCTATAAATTAGCGGTATATTAACGGGTAAATCGAGTCGCGATAAAATAGCGATGAATTGAGGTTAACGCACGGT TTCCCGGAAGGAAATAAAGC
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MVRFSVLDPWTDPRGGEIERVRIDNGILALEVISLGGIIRALWTPDKHGERANIVLGCDSAEDYLTQSAHLGAIAGRFAN RIANGKMHYQGQDYQLDVNQATNCLHGGREGFNRKNWHLGQLPDGVRLTLMSPDGDMGFPGNCTVQLDYRLAGNNLYVEI LASVDKACPVSLTQHSYFNLDGSETNHEHLMQIDAKRYLTMNDVSVPTGIAETAGSIFDLSQPIRLGDKLHAAELANTRG YDHCYMMNDPDGSLARFGCLSSPVSGRAMTVYTNQPSVQLYCANFLDGTVGRNQQVLNQHHGVCLEPQMLPDSPNQGERF GDDVWLVPGKVYHHISRYQFDADA
Sequences:
>Translated_344_residues MVRFSVLDPWTDPRGGEIERVRIDNGILALEVISLGGIIRALWTPDKHGERANIVLGCDSAEDYLTQSAHLGAIAGRFAN RIANGKMHYQGQDYQLDVNQATNCLHGGREGFNRKNWHLGQLPDGVRLTLMSPDGDMGFPGNCTVQLDYRLAGNNLYVEI LASVDKACPVSLTQHSYFNLDGSETNHEHLMQIDAKRYLTMNDVSVPTGIAETAGSIFDLSQPIRLGDKLHAAELANTRG YDHCYMMNDPDGSLARFGCLSSPVSGRAMTVYTNQPSVQLYCANFLDGTVGRNQQVLNQHHGVCLEPQMLPDSPNQGERF GDDVWLVPGKVYHHISRYQFDADA >Mature_344_residues MVRFSVLDPWTDPRGGEIERVRIDNGILALEVISLGGIIRALWTPDKHGERANIVLGCDSAEDYLTQSAHLGAIAGRFAN RIANGKMHYQGQDYQLDVNQATNCLHGGREGFNRKNWHLGQLPDGVRLTLMSPDGDMGFPGNCTVQLDYRLAGNNLYVEI LASVDKACPVSLTQHSYFNLDGSETNHEHLMQIDAKRYLTMNDVSVPTGIAETAGSIFDLSQPIRLGDKLHAAELANTRG YDHCYMMNDPDGSLARFGCLSSPVSGRAMTVYTNQPSVQLYCANFLDGTVGRNQQVLNQHHGVCLEPQMLPDSPNQGERF GDDVWLVPGKVYHHISRYQFDADA
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=332, Percent_Identity=40.0602409638554, Blast_Score=234, Evalue=8e-62, Organism=Escherichia coli, GI1786971, Length=325, Percent_Identity=36, Blast_Score=200, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17557428, Length=316, Percent_Identity=29.1139240506329, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI115533334, Length=316, Percent_Identity=29.1139240506329, Blast_Score=146, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6319493, Length=313, Percent_Identity=28.7539936102236, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6322004, Length=357, Percent_Identity=26.890756302521, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324399, Length=319, Percent_Identity=26.3322884012539, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI24659048, Length=352, Percent_Identity=34.6590909090909, Blast_Score=184, Evalue=5e-47, Organism=Drosophila melanogaster, GI24668278, Length=327, Percent_Identity=32.1100917431193, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24583720, Length=327, Percent_Identity=31.1926605504587, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI24668282, Length=350, Percent_Identity=28.8571428571429, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24641876, Length=332, Percent_Identity=28.9156626506024, Blast_Score=137, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 38019; Mature: 38019
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFSVLDPWTDPRGGEIERVRIDNGILALEVISLGGIIRALWTPDKHGERANIVLGCDS CEEEEEECCCCCCCCCEEEEEEECCCEEEEEEEHHCCCEEEEECCCCCCCEEEEEEECCC AEDYLTQSAHLGAIAGRFANRIANGKMHYQGQDYQLDVNQATNCLHGGREGFNRKNWHLG HHHHHHHCHHHHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCC QLPDGVRLTLMSPDGDMGFPGNCTVQLDYRLAGNNLYVEILASVDKACPVSLTQHSYFNL CCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCEEECCEEEEC DGSETNHEHLMQIDAKRYLTMNDVSVPTGIAETAGSIFDLSQPIRLGDKLHAAELANTRG CCCCCCCHHHEEECHHHEEEECCCCCCCCHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCC YDHCYMMNDPDGSLARFGCLSSPVSGRAMTVYTNQPSVQLYCANFLDGTVGRNQQVLNQH CCEEEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHC HGVCLEPQMLPDSPNQGERFGDDVWLVPGKVYHHISRYQFDADA CCEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHEEECCCC >Mature Secondary Structure MVRFSVLDPWTDPRGGEIERVRIDNGILALEVISLGGIIRALWTPDKHGERANIVLGCDS CEEEEEECCCCCCCCCEEEEEEECCCEEEEEEEHHCCCEEEEECCCCCCCEEEEEEECCC AEDYLTQSAHLGAIAGRFANRIANGKMHYQGQDYQLDVNQATNCLHGGREGFNRKNWHLG HHHHHHHCHHHHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCCCC QLPDGVRLTLMSPDGDMGFPGNCTVQLDYRLAGNNLYVEILASVDKACPVSLTQHSYFNL CCCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCEEECCEEEEC DGSETNHEHLMQIDAKRYLTMNDVSVPTGIAETAGSIFDLSQPIRLGDKLHAAELANTRG CCCCCCCHHHEEECHHHEEEECCCCCCCCHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCC YDHCYMMNDPDGSLARFGCLSSPVSGRAMTVYTNQPSVQLYCANFLDGTVGRNQQVLNQH CCEEEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHC HGVCLEPQMLPDSPNQGERFGDDVWLVPGKVYHHISRYQFDADA CCEEECCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7966338; 8905232; 9278503 [H]