| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873706
Identifier: 160873706
GI number: 160873706
Start: 679411
End: 681492
Strand: Direct
Name: 160873706
Synonym: Sbal195_0584
Alternate gene names: NA
Gene position: 679411-681492 (Clockwise)
Preceding gene: 160873705
Following gene: 160873707
Centisome position: 12.71
GC content: 41.21
Gene sequence:
>2082_bases ATGGGTAAATCAGATAATAACGTCATCAAACTTTGGCAAGCAAAGCACGACAAAGATACCCAAAGAAACTTGGCTGAGTT CATTTTGTTCGCTCAATCCGAGCTAACACTATACAAAGAACAAGGCTGGGACGCTCCAAGTTGGAAGCCAAATAAAGGGC AGGTTTTAGTTTTCGGGTTCAGGCAAACGGAAGGGAACAATTATTCCCCTATAGATATCTTTAAAGGGCCATATTTAGAG TTTGTGAAGGCTTTTATGCGTCAGCAAATGACCCTTAAGGAGATTACGTCTGCCCATTTGTGGATATCAATGTTTCGTAA TCTATATCTAGCATTGGTTGCTCAAGAGGATGACAAAGTACCATGCATTCGAGACGTTACCGGGCAAACATTAAAAGATG CTGTTGCGATAATAAAGCAATCTGAAAATAACCTTACACGCCGTTATCAAATCGGAGGTAAGTTAACCAGCCTTGTAAAA TGGCTTCTTGATGAGCGTATCGTACTTACGCTACCAACATTTAAAAATCCATTTCCCAAGCAGGTGCATACATCTGAGCA ATTAGGTGAAGAAGCTGACAGATTTCGTGAAGAGCGATGCCCCACCATGCACGAAATGTTATCTTTGGCTGAATGTTTTG CAAGAGCAGAGGCTGTTCAAGATAAATATTATACCAGTGCCCTAGTTTTACTTTGCTTTGCACCTGGTCGTATCAATGAA CTTGATGGCTTAACGATACACTCTTTACAACAAGGTGATGATGACGGTTGGTATATCGTATGGCATGGGTCAAAAGGTTA TCCTGATCATCGAAAATCTATCCCCCCCTTGATGCTAGATGTCGTTAAAGAAGCATTTAATCGACTGATTGAGATCGGAA AACCAGCCCGAGCATGCGCTAAATGGGCATATGAACACCCTAATGAGTTCTACAAACACGAAGGGTGTATTACGCAACCA GATCATAAAGCTAGTCAGCCTTTGTCGCATTTGCAGATTGCTAATGCAATGAGTATTGTGGGTTTTTTAAACAAGAATGG TGTGACCTTTCAACATACCAAAGCATTAACTAATTGGCTAAATGCATTATTAGATGAAAAAACAGTGACTTATTCTCGTT TGAATGAGGTAGTTCATCAAAAATACAAAAATAAAAGTTGGCCTAATAACCCAGACTCAAAGAGACCTGTTTGGGAAAAC CTGTTGCTGTATCGGGACCTTGAATTAAAGCCGAAAAGTGCGGCTAAACAGTTTAGTTGGACTATGCCAACGATTAACGC ATTTAATGAGCAACTTAACAAAAAACCTAAATCCATGAGCACCCTTTGGGAGCGTTTTAACATGACACAGGAGGATGGCA CTCCGATAGCGTTAACGACTCACCAATTTCGAGTGTGGCTCAATACTCACGCCAAAATTGGTGGTGTTGATGATTGGAAA ATTGCTCAATGGTCTGGTCGAGCTGATTACCGCCAGAATTCAGCCTATGACCTTCGAACACTAGAACAAAAAAGTAGACT AAGCACTGAGCTGATGGTGGCTAGTTACGATGATATGCCTTCAGCGATTATCTTGAGAAAGTATAACTTACCGGTCACAT TGAAATCGGTTGGCATAGACAGAGAAGGTATTGCTGATTTTACAGGTATTGGGTTCTGTACACATAATTTTGCGCAAACA CCATGCACAAAAGCGGGCGAGTGCGTGACTTGTAAAGAGCATGTTTGCTTAACGGGAATCCCTGAGACCCTGGAAGAGCT AGAACAACTGGATAAACTAATATCAGAACAATTAGATAAAGCAATACAAGCTAATGGTAAAGATGTGTTCGGTGCAGATA GATGGGTTACGCATCATGGGTGGAAATTGGGGCATATACGCACCCTAATCGCGATAATGAAGGACGAAAGCCTTCCAGAG GGAACTGTTATTCAAATTCCAGTAGAGCATGATCCCTCACCAACAAGACGAGCGCTTGAGGATAAAAAAATGGTCACAGA CCTAGAGGATCGTTGCAACACTAAAGCGCAGATTAAGCCTCAATTTAATGCAAACATAAAAAAATTGTTGGGGTTTGGAT AA
Upstream 100 bases:
>100_bases GCTAGCTCTTTTGTATTGCAATCAACCGATAGAGTCATGCTAGCCATACAAGAAGTTATAATACTTTGTGAGAAAGCGAA AAGAGATGAGGGGTTGTTAG
Downstream 100 bases:
>100_bases TGCCAAAAATAGTCATAACAAGCAGCAGTAAAAAGAAGATTCTCAATATCATTTCAGGTTGGCAAGGCAAGCTTTCATGG TCATTACTGTGTGAGCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Integrase Family Protein; Phage Integrase; Transposase B Transposon Tn
Number of amino acids: Translated: 693; Mature: 692
Protein sequence:
>693_residues MGKSDNNVIKLWQAKHDKDTQRNLAEFILFAQSELTLYKEQGWDAPSWKPNKGQVLVFGFRQTEGNNYSPIDIFKGPYLE FVKAFMRQQMTLKEITSAHLWISMFRNLYLALVAQEDDKVPCIRDVTGQTLKDAVAIIKQSENNLTRRYQIGGKLTSLVK WLLDERIVLTLPTFKNPFPKQVHTSEQLGEEADRFREERCPTMHEMLSLAECFARAEAVQDKYYTSALVLLCFAPGRINE LDGLTIHSLQQGDDDGWYIVWHGSKGYPDHRKSIPPLMLDVVKEAFNRLIEIGKPARACAKWAYEHPNEFYKHEGCITQP DHKASQPLSHLQIANAMSIVGFLNKNGVTFQHTKALTNWLNALLDEKTVTYSRLNEVVHQKYKNKSWPNNPDSKRPVWEN LLLYRDLELKPKSAAKQFSWTMPTINAFNEQLNKKPKSMSTLWERFNMTQEDGTPIALTTHQFRVWLNTHAKIGGVDDWK IAQWSGRADYRQNSAYDLRTLEQKSRLSTELMVASYDDMPSAIILRKYNLPVTLKSVGIDREGIADFTGIGFCTHNFAQT PCTKAGECVTCKEHVCLTGIPETLEELEQLDKLISEQLDKAIQANGKDVFGADRWVTHHGWKLGHIRTLIAIMKDESLPE GTVIQIPVEHDPSPTRRALEDKKMVTDLEDRCNTKAQIKPQFNANIKKLLGFG
Sequences:
>Translated_693_residues MGKSDNNVIKLWQAKHDKDTQRNLAEFILFAQSELTLYKEQGWDAPSWKPNKGQVLVFGFRQTEGNNYSPIDIFKGPYLE FVKAFMRQQMTLKEITSAHLWISMFRNLYLALVAQEDDKVPCIRDVTGQTLKDAVAIIKQSENNLTRRYQIGGKLTSLVK WLLDERIVLTLPTFKNPFPKQVHTSEQLGEEADRFREERCPTMHEMLSLAECFARAEAVQDKYYTSALVLLCFAPGRINE LDGLTIHSLQQGDDDGWYIVWHGSKGYPDHRKSIPPLMLDVVKEAFNRLIEIGKPARACAKWAYEHPNEFYKHEGCITQP DHKASQPLSHLQIANAMSIVGFLNKNGVTFQHTKALTNWLNALLDEKTVTYSRLNEVVHQKYKNKSWPNNPDSKRPVWEN LLLYRDLELKPKSAAKQFSWTMPTINAFNEQLNKKPKSMSTLWERFNMTQEDGTPIALTTHQFRVWLNTHAKIGGVDDWK IAQWSGRADYRQNSAYDLRTLEQKSRLSTELMVASYDDMPSAIILRKYNLPVTLKSVGIDREGIADFTGIGFCTHNFAQT PCTKAGECVTCKEHVCLTGIPETLEELEQLDKLISEQLDKAIQANGKDVFGADRWVTHHGWKLGHIRTLIAIMKDESLPE GTVIQIPVEHDPSPTRRALEDKKMVTDLEDRCNTKAQIKPQFNANIKKLLGFG >Mature_692_residues GKSDNNVIKLWQAKHDKDTQRNLAEFILFAQSELTLYKEQGWDAPSWKPNKGQVLVFGFRQTEGNNYSPIDIFKGPYLEF VKAFMRQQMTLKEITSAHLWISMFRNLYLALVAQEDDKVPCIRDVTGQTLKDAVAIIKQSENNLTRRYQIGGKLTSLVKW LLDERIVLTLPTFKNPFPKQVHTSEQLGEEADRFREERCPTMHEMLSLAECFARAEAVQDKYYTSALVLLCFAPGRINEL DGLTIHSLQQGDDDGWYIVWHGSKGYPDHRKSIPPLMLDVVKEAFNRLIEIGKPARACAKWAYEHPNEFYKHEGCITQPD HKASQPLSHLQIANAMSIVGFLNKNGVTFQHTKALTNWLNALLDEKTVTYSRLNEVVHQKYKNKSWPNNPDSKRPVWENL LLYRDLELKPKSAAKQFSWTMPTINAFNEQLNKKPKSMSTLWERFNMTQEDGTPIALTTHQFRVWLNTHAKIGGVDDWKI AQWSGRADYRQNSAYDLRTLEQKSRLSTELMVASYDDMPSAIILRKYNLPVTLKSVGIDREGIADFTGIGFCTHNFAQTP CTKAGECVTCKEHVCLTGIPETLEELEQLDKLISEQLDKAIQANGKDVFGADRWVTHHGWKLGHIRTLIAIMKDESLPEG TVIQIPVEHDPSPTRRALEDKKMVTDLEDRCNTKAQIKPQFNANIKKLLGFG
Specific function: Unknown
COG id: COG4688
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79322; Mature: 79190
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSDNNVIKLWQAKHDKDTQRNLAEFILFAQSELTLYKEQGWDAPSWKPNKGQVLVFGF CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEHHCCCCCCCCCCCCCCEEEEEE RQTEGNNYSPIDIFKGPYLEFVKAFMRQQMTLKEITSAHLWISMFRNLYLALVAQEDDKV EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC PCIRDVTGQTLKDAVAIIKQSENNLTRRYQIGGKLTSLVKWLLDERIVLTLPTFKNPFPK CCHHHCCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCC QVHTSEQLGEEADRFREERCPTMHEMLSLAECFARAEAVQDKYYTSALVLLCFAPGRINE HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LDGLTIHSLQQGDDDGWYIVWHGSKGYPDHRKSIPPLMLDVVKEAFNRLIEIGKPARACA CCCCEEEHHCCCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH KWAYEHPNEFYKHEGCITQPDHKASQPLSHLQIANAMSIVGFLNKNGVTFQHTKALTNWL HHHHHCCHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH NALLDEKTVTYSRLNEVVHQKYKNKSWPNNPDSKRPVWENLLLYRDLELKPKSAAKQFSW HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCC TMPTINAFNEQLNKKPKSMSTLWERFNMTQEDGTPIALTTHQFRVWLNTHAKIGGVDDWK CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCE IAQWSGRADYRQNSAYDLRTLEQKSRLSTELMVASYDDMPSAIILRKYNLPVTLKSVGID EEECCCCCCCCCCCCHHHHHHHHHHHCCHHEEEEECCCCCCEEEEEECCCCEEEHCCCCC REGIADFTGIGFCTHNFAQTPCTKAGECVTCKEHVCLTGIPETLEELEQLDKLISEQLDK CCCCCHHHCCCHHHCCCCCCCCCCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHH AIQANGKDVFGADRWVTHHGWKLGHIRTLIAIMKDESLPEGTVIQIPVEHDPSPTRRALE HHHCCCCCCCCCCCEEHHCCEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH DKKMVTDLEDRCNTKAQIKPQFNANIKKLLGFG HHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCC >Mature Secondary Structure GKSDNNVIKLWQAKHDKDTQRNLAEFILFAQSELTLYKEQGWDAPSWKPNKGQVLVFGF CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEHHCCCCCCCCCCCCCCEEEEEE RQTEGNNYSPIDIFKGPYLEFVKAFMRQQMTLKEITSAHLWISMFRNLYLALVAQEDDKV EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC PCIRDVTGQTLKDAVAIIKQSENNLTRRYQIGGKLTSLVKWLLDERIVLTLPTFKNPFPK CCHHHCCCHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCC QVHTSEQLGEEADRFREERCPTMHEMLSLAECFARAEAVQDKYYTSALVLLCFAPGRINE HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LDGLTIHSLQQGDDDGWYIVWHGSKGYPDHRKSIPPLMLDVVKEAFNRLIEIGKPARACA CCCCEEEHHCCCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH KWAYEHPNEFYKHEGCITQPDHKASQPLSHLQIANAMSIVGFLNKNGVTFQHTKALTNWL HHHHHCCHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH NALLDEKTVTYSRLNEVVHQKYKNKSWPNNPDSKRPVWENLLLYRDLELKPKSAAKQFSW HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCC TMPTINAFNEQLNKKPKSMSTLWERFNMTQEDGTPIALTTHQFRVWLNTHAKIGGVDDWK CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCE IAQWSGRADYRQNSAYDLRTLEQKSRLSTELMVASYDDMPSAIILRKYNLPVTLKSVGID EEECCCCCCCCCCCCHHHHHHHHHHHCCHHEEEEECCCCCCEEEEEECCCCEEEHCCCCC REGIADFTGIGFCTHNFAQTPCTKAGECVTCKEHVCLTGIPETLEELEQLDKLISEQLDK CCCCCHHHCCCHHHCCCCCCCCCCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHH AIQANGKDVFGADRWVTHHGWKLGHIRTLIAIMKDESLPEGTVIQIPVEHDPSPTRRALE HHHCCCCCCCCCCCEEHHCCEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH DKKMVTDLEDRCNTKAQIKPQFNANIKKLLGFG HHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA