| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yhbE [H]
Identifier: 160873695
GI number: 160873695
Start: 664274
End: 665248
Strand: Direct
Name: yhbE [H]
Synonym: Sbal195_0573
Alternate gene names: 160873695
Gene position: 664274-665248 (Clockwise)
Preceding gene: 160873692
Following gene: 160873696
Centisome position: 12.42
GC content: 48.51
Gene sequence:
>975_bases GTGAACCTTAGCCATAACGCCCCTCAGGCAAATAATCATGCTCAACTCGGGCTGATCTTCATCTCAGTTGCGATTGTATT TTGGGGTATGTTACCCATAGCCTTGAAGCTTTCGGGGGCTTTTATCGATCCTGTCACTTTGACTTGGTTTCGTTTTTTGG TCGCGCTGGTGGTTAGCATATTGATCCAATGGAGCGCGGGCAGCCTTAAGCAATTTGCGGCGCTCGATGCCAAAGTCTGG TTAAGGTTAGTGCTTGCGGGCGTGTTTTTGATGCTCAATTATGTGTCTTTTGTTTACTCACTCGATTATCTCGCGCCGGG TGCTGCCCAGCTGAATTTCCAGACTTCGCCCTTTTTCCTCGCCTTCGGTGGCGTGCTGTTTTTTAAGGAACGGCTGAATG CGGTGCAGCTCAGTTGTTTTGCGACACTGGCCTTAGGTATGTTGATGTTTTTCCATCCGTATTTGGATTTATCTGGCGCC AATAATCATCAGGTTTGGATTGGGGTAATGATTATTCAGTTCTCGGCGTTGTCGTGGACTAGCTATGCCTTGTTGCAAAA ATCATTACTCAATCGTTTATCGCCCGCAAACGTGCTTTTAGTGATCTATGGCTTAGGTATTTTCGTAATGGCTCCCTTTA GCGACTTTAGTCAGTTTGCCAGTATGGACAGCTTTGAGTGGCAGATAGCGCTGTTTTGCGCCGCCAATACCTTGATCGCC TATGGCTGTTTTGGGCAGTCGATGAAGTACTGGCCGACGGCGCAGGTGAGCGCCATGTTGGCCCTAACGCCAGTATTTAG CTTTAGTGCCACTGCATTGGTGGTGAGCATTGGCTGGTGGCCAGAAGTCTTCCATGCCGATGAATTAGATGGATTATCTC TGCTGGGGATTGGCGTCATTATTGTGTCTGTGATGGTGGTACAATTACTGCCTCTGTATCGCAATCGTCAGGCGAAGCGT TTGCAGGCTGCCTAA
Upstream 100 bases:
>100_bases ATCCATTTAAACGCGAATGTTTCCATGATTCGCTGCTAGATATTGTGCTGACTCAGTGCCAGAATGACGCTCCATTTTGC GGTCTCTACTGGACATCTCC
Downstream 100 bases:
>100_bases TATCCATGGTATTTGATTAGCCCAATGGTATTTAATTAGCGTATGAAACATACATTTTTACCCATGGGAAAGGCCAGTGA TCACTAGACTCAGCGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNLSHNAPQANNHAQLGLIFISVAIVFWGMLPIALKLSGAFIDPVTLTWFRFLVALVVSILIQWSAGSLKQFAALDAKVW LRLVLAGVFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFLAFGGVLFFKERLNAVQLSCFATLALGMLMFFHPYLDLSGA NNHQVWIGVMIIQFSALSWTSYALLQKSLLNRLSPANVLLVIYGLGIFVMAPFSDFSQFASMDSFEWQIALFCAANTLIA YGCFGQSMKYWPTAQVSAMLALTPVFSFSATALVVSIGWWPEVFHADELDGLSLLGIGVIIVSVMVVQLLPLYRNRQAKR LQAA
Sequences:
>Translated_324_residues MNLSHNAPQANNHAQLGLIFISVAIVFWGMLPIALKLSGAFIDPVTLTWFRFLVALVVSILIQWSAGSLKQFAALDAKVW LRLVLAGVFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFLAFGGVLFFKERLNAVQLSCFATLALGMLMFFHPYLDLSGA NNHQVWIGVMIIQFSALSWTSYALLQKSLLNRLSPANVLLVIYGLGIFVMAPFSDFSQFASMDSFEWQIALFCAANTLIA YGCFGQSMKYWPTAQVSAMLALTPVFSFSATALVVSIGWWPEVFHADELDGLSLLGIGVIIVSVMVVQLLPLYRNRQAKR LQAA >Mature_324_residues MNLSHNAPQANNHAQLGLIFISVAIVFWGMLPIALKLSGAFIDPVTLTWFRFLVALVVSILIQWSAGSLKQFAALDAKVW LRLVLAGVFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFLAFGGVLFFKERLNAVQLSCFATLALGMLMFFHPYLDLSGA NNHQVWIGVMIIQFSALSWTSYALLQKSLLNRLSPANVLLVIYGLGIFVMAPFSDFSQFASMDSFEWQIALFCAANTLIA YGCFGQSMKYWPTAQVSAMLALTPVFSFSATALVVSIGWWPEVFHADELDGLSLLGIGVIIVSVMVVQLLPLYRNRQAKR LQAA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI1789575, Length=297, Percent_Identity=30.6397306397306, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 35793; Mature: 35793
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSHNAPQANNHAQLGLIFISVAIVFWGMLPIALKLSGAFIDPVTLTWFRFLVALVVSI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LIQWSAGSLKQFAALDAKVWLRLVLAGVFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHH AFGGVLFFKERLNAVQLSCFATLALGMLMFFHPYLDLSGANNHQVWIGVMIIQFSALSWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHHHH SYALLQKSLLNRLSPANVLLVIYGLGIFVMAPFSDFSQFASMDSFEWQIALFCAANTLIA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHH YGCFGQSMKYWPTAQVSAMLALTPVFSFSATALVVSIGWWPEVFHADELDGLSLLGIGVI HHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHEEEEEECCCHHHCCCCCCCCHHHHHHHHH IVSVMVVQLLPLYRNRQAKRLQAA HHHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure MNLSHNAPQANNHAQLGLIFISVAIVFWGMLPIALKLSGAFIDPVTLTWFRFLVALVVSI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LIQWSAGSLKQFAALDAKVWLRLVLAGVFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHH AFGGVLFFKERLNAVQLSCFATLALGMLMFFHPYLDLSGANNHQVWIGVMIIQFSALSWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHHHH SYALLQKSLLNRLSPANVLLVIYGLGIFVMAPFSDFSQFASMDSFEWQIALFCAANTLIA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHH YGCFGQSMKYWPTAQVSAMLALTPVFSFSATALVVSIGWWPEVFHADELDGLSLLGIGVI HHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHEEEEEECCCHHHCCCCCCCCHHHHHHHHH IVSVMVVQLLPLYRNRQAKRLQAA HHHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]