| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873690
Identifier: 160873690
GI number: 160873690
Start: 658106
End: 659173
Strand: Direct
Name: 160873690
Synonym: Sbal195_0568
Alternate gene names: NA
Gene position: 658106-659173 (Clockwise)
Preceding gene: 160873689
Following gene: 160873691
Centisome position: 12.31
GC content: 50.66
Gene sequence:
>1068_bases ATGAAATATTCCGCAATGTTATTACTGGCCGCGATGGGGTCGTTAACCGTGCAGGCACAAGCCGAATCCGATCCGGTGCA AGAGCGCCCAGATAAACAAGCCCCGCTGCCTTCTTTCCCTAAGATACCGGATCAAACCTATCTTACTCCTAGACCTTTGA GTGCCATTCCTGAAGGCGCCTTTGGTGACAAAGTGCGTTTGGGTTATCAGCTATTTGTGAATACCCAACAGCTGCGTGAT AAGTATGTGGGCAACGAACTTAACTGCACCAACTGCCATATGGATGCGGGCCGTAAAGCCAATGCTTCACCCCTATGGGG CGCGTATTTTGCTTATCCGGCCTATCGCAAAAAAGATAATAAGGTCAGTAGCTTTGAAGAACGCATCCAAGGCTGCTTTA ACTATTCGATGAATGGTAAAGCCCCTGCATCGGCGAGCCCTGAGCTAGTAGCGCTTTCTGCCTATGCCTATTGGTTGGGA ATGGGTGGCTTGATGGACGAAGCTAATATTAGCGGCCCAGTCCCCGAGCTTAGCGATGCTGAGTTAGTCAAAGGTGCCAA ACGGGAAGACTTCCCGCTACCTGAGATATTAGCCAAGGCGATGACAGTTGAGCAGCGTGCCAACTTGCCGGGTCGTGGTT ATCCTGAGATCCCAAAACCCGAACAAGCCTATTCACCTGAACGGGGTAAAGAAGTCTATGTCGCCCATTGCCAAACTTGC CACAGTGTTGATGGCCGAGGTCAAGCGATTGCAGGCGTTTATGCGTTGCCACCGCTGTGGGGGCCTAAGAGTTACAACTG GGGGGCGGGAATGCACAGGGTCAATACTGCTGCATTCTTCATCCATGAAAACATGCCTTTTGGGAAGAGTATGCAGTTAA CTAACCAACAGGCTTGGGACGTTGCAGCTTATATTAACTCCCACGAGCGTCCACAGGACCCACGTAGCAAGGGCGATGTG AAGCAGGCGCAGGAGAAATACCACAATGACAGCGATTACTATGGTGTCACGGTCGATGGCAAAGTGTTAGGCACTGAGTC CTATCCGATTTTTCCTAAGAAGTCATAG
Upstream 100 bases:
>100_bases GATGTCGATGGCATGATGGCGAACGTGGCTAACAAGCTTACCGCCGCTGAGGTTGATGCCTTAGCAAACTACTTTGCTAA TTTGAAATAAGGAGCTGGCC
Downstream 100 bases:
>100_bases TTGAGCGGCTTTGATTCAGTGCTCGTGTGATGAAATAAAGCGAGTTAATAAATAAAGCAGAAAAGCCAGTAAGCCTATAG CCTTGCTGGCTTTTTTATAA
Product: cytochrome c class I
Products: NA
Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Gluconate 2-Dehydrogenase; Cytochrome C Signal Peptide Protein; C-Type Cytochrome Family Protein; C-Type Cytochrome; Class I Cytochrome C; Diheme-Containing SoxA-Like Protein; Thiosulfate Dehydrogenase; Cytochrome C Family; Cytochrome; Cytochrome C Family Protein Degenerate; Quinol-Cytochrome C Reductase Cytochrome C Subunit; CYTA Protein; Di-Heme Cytochrome C; OmpA/MotB
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKYSAMLLLAAMGSLTVQAQAESDPVQERPDKQAPLPSFPKIPDQTYLTPRPLSAIPEGAFGDKVRLGYQLFVNTQQLRD KYVGNELNCTNCHMDAGRKANASPLWGAYFAYPAYRKKDNKVSSFEERIQGCFNYSMNGKAPASASPELVALSAYAYWLG MGGLMDEANISGPVPELSDAELVKGAKREDFPLPEILAKAMTVEQRANLPGRGYPEIPKPEQAYSPERGKEVYVAHCQTC HSVDGRGQAIAGVYALPPLWGPKSYNWGAGMHRVNTAAFFIHENMPFGKSMQLTNQQAWDVAAYINSHERPQDPRSKGDV KQAQEKYHNDSDYYGVTVDGKVLGTESYPIFPKKS
Sequences:
>Translated_355_residues MKYSAMLLLAAMGSLTVQAQAESDPVQERPDKQAPLPSFPKIPDQTYLTPRPLSAIPEGAFGDKVRLGYQLFVNTQQLRD KYVGNELNCTNCHMDAGRKANASPLWGAYFAYPAYRKKDNKVSSFEERIQGCFNYSMNGKAPASASPELVALSAYAYWLG MGGLMDEANISGPVPELSDAELVKGAKREDFPLPEILAKAMTVEQRANLPGRGYPEIPKPEQAYSPERGKEVYVAHCQTC HSVDGRGQAIAGVYALPPLWGPKSYNWGAGMHRVNTAAFFIHENMPFGKSMQLTNQQAWDVAAYINSHERPQDPRSKGDV KQAQEKYHNDSDYYGVTVDGKVLGTESYPIFPKKS >Mature_355_residues MKYSAMLLLAAMGSLTVQAQAESDPVQERPDKQAPLPSFPKIPDQTYLTPRPLSAIPEGAFGDKVRLGYQLFVNTQQLRD KYVGNELNCTNCHMDAGRKANASPLWGAYFAYPAYRKKDNKVSSFEERIQGCFNYSMNGKAPASASPELVALSAYAYWLG MGGLMDEANISGPVPELSDAELVKGAKREDFPLPEILAKAMTVEQRANLPGRGYPEIPKPEQAYSPERGKEVYVAHCQTC HSVDGRGQAIAGVYALPPLWGPKSYNWGAGMHRVNTAAFFIHENMPFGKSMQLTNQQAWDVAAYINSHERPQDPRSKGDV KQAQEKYHNDSDYYGVTVDGKVLGTESYPIFPKKS
Specific function: Unknown
COG id: COG3258
COG function: function code C; Cytochrome c
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39240; Mature: 39240
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSAMLLLAAMGSLTVQAQAESDPVQERPDKQAPLPSFPKIPDQTYLTPRPLSAIPEGA CCHHHHHHHHHHCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC FGDKVRLGYQLFVNTQQLRDKYVGNELNCTNCHMDAGRKANASPLWGAYFAYPAYRKKDN CCCEEEECEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCC KVSSFEERIQGCFNYSMNGKAPASASPELVALSAYAYWLGMGGLMDEANISGPVPELSDA HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCH ELVKGAKREDFPLPEILAKAMTVEQRANLPGRGYPEIPKPEQAYSPERGKEVYVAHCQTC HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEHHHH HSVDGRGQAIAGVYALPPLWGPKSYNWGAGMHRVNTAAFFIHENMPFGKSMQLTNQQAWD HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECEEEEEEECCCCCCCCEECCCCHHHH VAAYINSHERPQDPRSKGDVKQAQEKYHNDSDYYGVTVDGKVLGTESYPIFPKKS HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCCCC >Mature Secondary Structure MKYSAMLLLAAMGSLTVQAQAESDPVQERPDKQAPLPSFPKIPDQTYLTPRPLSAIPEGA CCHHHHHHHHHHCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC FGDKVRLGYQLFVNTQQLRDKYVGNELNCTNCHMDAGRKANASPLWGAYFAYPAYRKKDN CCCEEEECEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCC KVSSFEERIQGCFNYSMNGKAPASASPELVALSAYAYWLGMGGLMDEANISGPVPELSDA HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCH ELVKGAKREDFPLPEILAKAMTVEQRANLPGRGYPEIPKPEQAYSPERGKEVYVAHCQTC HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEHHHH HSVDGRGQAIAGVYALPPLWGPKSYNWGAGMHRVNTAAFFIHENMPFGKSMQLTNQQAWD HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECEEEEEEECCCCCCCCEECCCCHHHH VAAYINSHERPQDPRSKGDVKQAQEKYHNDSDYYGVTVDGKVLGTESYPIFPKKS HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA