| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873688
Identifier: 160873688
GI number: 160873688
Start: 656213
End: 657241
Strand: Direct
Name: 160873688
Synonym: Sbal195_0566
Alternate gene names: NA
Gene position: 656213-657241 (Clockwise)
Preceding gene: 160873687
Following gene: 160873689
Centisome position: 12.27
GC content: 50.53
Gene sequence:
>1029_bases ATGTTACTACGCCATAGCCCATTGACGGCCAACGATTTACGCCAGTGTTTACGGATTGCGACTGGCGCGACCATAGGTTT TACACTGTGTAAAATGTTTGGTTGGAGCAATGGAGTCTTCTTCACTGTGACCCCCATGTTATTACTCGGACTCGTGCCTG TGATGAATGGCCACGCCATGCGCCAGTTATTGGCCTCATCTGCCATGGCGGGGTTAGAGGTTGGACTGCTCGGTGGTTTC TTCGGTAGCCATCCTGGCCTGATGACGCCCATCGTCTTCCTGTTATTTTTATACCGTTTTGCGGCCATGTCCCGTGGCAG TCTATTCCTCTTTGGCGCCAATGGAGTGCTCAGCCTCAGCATCATGCTGCACTTTGCTAGTTATCCCAATACCAATCTGA ATGACTTAGTTTTCAGTAACTTTTGGGCGACGGCACTGTCGGTCGTTATTGCCTACGCTATGACGGCGCTCTGGCCCGAT GTGGAACCAAGGGCGGCTTACAAGCCTGGACCTAAGGCGCCACATCGAATGCGCCACGAAGCGTTACTCGGCGCGACCAT AGCGACCGCATCGTTTCTGGTATTCCAAATATTTGATCTGCGGGATTCTATGTCGGCTCAGGCGACCACCTTGTTGCTCT TGTTTCCTATGCATTGGAATGGCGCACTCGACTATGCCCGTAAGCGCGCTATAGGTACTTTGCTAGGCGTGTCGTTTGGG GTCGTTGTGCAGTTGGTACTCTATGACTGGTCAGGACTATTGATATTAATCGTCCCCTTGCTATGGATTGGCTTGATGAT CTTTAGCCAAGCCCATGTGCGAGAGGCAAGTGGCTCTGGCGTGGGTTTTGGCGCCATGACAACTTTAGGTATTCTGTTTG GCCAGTATCTGACCCCTGGCAACGATTTAATCTTTAGCGCCTTATATCGAGTGAGCAGCATTCTCACCGCCATCGTCGGC ACGCTACTCCTATGTTATTTGATACATAAGTTATTGAATCGTTTTGAATCGACGCGATTTGGTTATTGA
Upstream 100 bases:
>100_bases AGTGGCTTGAGTGAACGCTTCAAAGCAACATAAATGTGAATGCAGCATAAGCCAGCTAAACATCCCCAATTTTACGTATC GATAGAACAAGGCGACGAGC
Downstream 100 bases:
>100_bases TTAAGGCTACTCGGGCTTGAAGACTTGCAGCTTACCCTTTCAAAGAGTAAGGTAAATTTATCCCATTTGGATTGAACGAT AAATGAGCCTTAATGAACGC
Product: response regulator receiver protein
Products: NA
Alternate protein names: Facilitator Superfamily Permease
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MLLRHSPLTANDLRQCLRIATGATIGFTLCKMFGWSNGVFFTVTPMLLLGLVPVMNGHAMRQLLASSAMAGLEVGLLGGF FGSHPGLMTPIVFLLFLYRFAAMSRGSLFLFGANGVLSLSIMLHFASYPNTNLNDLVFSNFWATALSVVIAYAMTALWPD VEPRAAYKPGPKAPHRMRHEALLGATIATASFLVFQIFDLRDSMSAQATTLLLLFPMHWNGALDYARKRAIGTLLGVSFG VVVQLVLYDWSGLLILIVPLLWIGLMIFSQAHVREASGSGVGFGAMTTLGILFGQYLTPGNDLIFSALYRVSSILTAIVG TLLLCYLIHKLLNRFESTRFGY
Sequences:
>Translated_342_residues MLLRHSPLTANDLRQCLRIATGATIGFTLCKMFGWSNGVFFTVTPMLLLGLVPVMNGHAMRQLLASSAMAGLEVGLLGGF FGSHPGLMTPIVFLLFLYRFAAMSRGSLFLFGANGVLSLSIMLHFASYPNTNLNDLVFSNFWATALSVVIAYAMTALWPD VEPRAAYKPGPKAPHRMRHEALLGATIATASFLVFQIFDLRDSMSAQATTLLLLFPMHWNGALDYARKRAIGTLLGVSFG VVVQLVLYDWSGLLILIVPLLWIGLMIFSQAHVREASGSGVGFGAMTTLGILFGQYLTPGNDLIFSALYRVSSILTAIVG TLLLCYLIHKLLNRFESTRFGY >Mature_342_residues MLLRHSPLTANDLRQCLRIATGATIGFTLCKMFGWSNGVFFTVTPMLLLGLVPVMNGHAMRQLLASSAMAGLEVGLLGGF FGSHPGLMTPIVFLLFLYRFAAMSRGSLFLFGANGVLSLSIMLHFASYPNTNLNDLVFSNFWATALSVVIAYAMTALWPD VEPRAAYKPGPKAPHRMRHEALLGATIATASFLVFQIFDLRDSMSAQATTLLLLFPMHWNGALDYARKRAIGTLLGVSFG VVVQLVLYDWSGLLILIVPLLWIGLMIFSQAHVREASGSGVGFGAMTTLGILFGQYLTPGNDLIFSALYRVSSILTAIVG TLLLCYLIHKLLNRFESTRFGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37342; Mature: 37342
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRHSPLTANDLRQCLRIATGATIGFTLCKMFGWSNGVFFTVTPMLLLGLVPVMNGHAM CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHH RQLLASSAMAGLEVGLLGGFFGSHPGLMTPIVFLLFLYRFAAMSRGSLFLFGANGVLSLS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH IMLHFASYPNTNLNDLVFSNFWATALSVVIAYAMTALWPDVEPRAAYKPGPKAPHRMRHE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH ALLGATIATASFLVFQIFDLRDSMSAQATTLLLLFPMHWNGALDYARKRAIGTLLGVSFG HHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH VVVQLVLYDWSGLLILIVPLLWIGLMIFSQAHVREASGSGVGFGAMTTLGILFGQYLTPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC NDLIFSALYRVSSILTAIVGTLLLCYLIHKLLNRFESTRFGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLLRHSPLTANDLRQCLRIATGATIGFTLCKMFGWSNGVFFTVTPMLLLGLVPVMNGHAM CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHH RQLLASSAMAGLEVGLLGGFFGSHPGLMTPIVFLLFLYRFAAMSRGSLFLFGANGVLSLS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH IMLHFASYPNTNLNDLVFSNFWATALSVVIAYAMTALWPDVEPRAAYKPGPKAPHRMRHE HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH ALLGATIATASFLVFQIFDLRDSMSAQATTLLLLFPMHWNGALDYARKRAIGTLLGVSFG HHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH VVVQLVLYDWSGLLILIVPLLWIGLMIFSQAHVREASGSGVGFGAMTTLGILFGQYLTPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC NDLIFSALYRVSSILTAIVGTLLLCYLIHKLLNRFESTRFGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA