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The map label for this gene is hlyB [H]

Identifier: 160873685

GI number: 160873685

Start: 652362

End: 654263

Strand: Reverse

Name: hlyB [H]

Synonym: Sbal195_0563

Alternate gene names: 160873685

Gene position: 654263-652362 (Counterclockwise)

Preceding gene: 160873693

Following gene: 160873681

Centisome position: 12.24

GC content: 47.74

Gene sequence:

>1902_bases
GTGAATTTAAAAATTAGTACGAGGATTGTGGTTGGGATATGTCTATTACTGTTGGCCATGATGAGCTTTATCATGCTGCT
AGTCCTGTCGGAATTCAGCAGTCAGGTGAAAGAATCTGAGCAAAGAGAACTGCATAAACTGTACGAAACTGCGGTAGCCA
ACATAGCCTCATCCGGTAAACTCGCACAGGCCATGGCAACGATAGTTTCACTGACGCCAGAGATCCAAAGTAACTTCGCC
GAACGGGATCGCCCTGCACTCAAAGACCGTACTCTGCCGCTGTTTGCCAAGCTTAAGCAAGATTTCGACATACAACAATT
TCAGTTTCATACGCCGCTGGCAACCTCTTTTTTACGATTACATCGCCCCGAAAAATTTGGTGATGATCTCACTGCAATTC
GTAAAACCATTGTGGAAACCAACACCACAAAACAGCCCTTAAACGGTTTGGAATATGGTGTTGAAGGTTTAGGGATTCGC
GGTTTAGTGCCCATGGGTTATCAAGGCCAACACACAGGCTCAGTGGAATTTGGTATGTCCTTTGGACAACCTTTCTTCGA
CAGTTTTAAAGATGCTTATCAAGCTGAAATCGCACTATTGTTGCCCAATGGCGCGGATTTTAAAGCATTTGGCGCCACGT
TCACGCCCGATATTCAGGCCATAAGTGAACTCAATAGCGTGATGCAAGGCAATGAAGTGATTCGCACTATTAGCTTAGAG
GGCAAAACCTTCGCTTTGTATCGCCACGCCATAAAAGATTACTCGGGACAAGTCTTTGGGGTACTGGATATTGCGATGGA
CAGAAGCCATTCAGAGCAAGTTATGGCGGATATTCGCCTCAAGTTGATCCTCATCGGTTTCGCTGCAATGTTAATCGGCA
CTGCCATTGCTTGGTTTATTGCTAAGGGCATTACCCGCCCAATAGCAGAAACAACCCAAGCCATGAATGACATCGCCGAA
GGCGAAGGCGATTTAACCCGTCGAATTACCATAACGAGTAAAGATGAAATCGCCGAGTTAGCGCAGGCATTTAACCGTTT
TGTGGAGAAAATCCACCACACTGTGACTCAAGTATCTGATGCAACGAGTTTACTCGCAACCTCAGCGGAAGAGATGTCGG
GCATTACCCACGAAACTCAATCGATGGCCAATCGTCAGAATCTTGAAACCGAACAAGTCGCCACCGCAATGAATGAAATG
GCCGCCACTGTTCAAGAGGTTGCCCACAATGCGACCGATGCCGCGGATGCTGCCAATCACGCCAATGAGTCAACCGAACA
AGGCAAACTCGTAGTGCAAAAAGTCGTCGCGACGATTGCTGTATTAGCGGAAGAAATCGCCGCAGCCGCCAATGCCATTA
ATGAACTCGAACGTAATACTGCCGAAATTGATTCTGTATTAGTTGTGATCCGCAATATTACCGAACAGACCAACTTGCTG
GCGCTTAATGCCGCAATTGAGGCTGCCAGAGCCGGAGAGCAAGGACGAGGATTCGCCGTCGTAGCCGATGAAGTTCGCAC
CCTTGCGACTCGCACTCAAGCTTCAACCACAGAAATTCAAAAAATGATTGAAGCGCTACAGCTTAAAGCCAAATCTACCG
TTTCGGCGATGGAAACCAGTTCACGCACTACTCAAAGCTGTGTTGCCCAAGTTAATCAAGCGGGTGAAGAACTCGTGGCC
ATCACCCAAGCAGTTTCGACCATTAGCCAGATGAACATCCAGATCGCCAGTGCGGCAAATGAGCAATGTGCTGTTTCCGC
AGAAATTAACAAAAACATAAATAACATCAACGATATTGCCACGACGACAACCAATAGTGCGGTGCACACTGCGCGGGCGG
GTGACGAACTTGCCCAGCTTGCGGCTCGCCTGCAAGTGCTACTGGCACAGTTTAGGATCTAA

Upstream 100 bases:

>100_bases
AATCCAAAAGGCTGGCGCCATCTCAAATATAATCAGCCGTATCTCTATAATATTAAAAAGATAAATCAGACTGATGAAGT
GAACTGGGAGGTTGGCTTTG

Downstream 100 bases:

>100_bases
TACCTACACCACTGACACAAAGCAAAACGCCGCATTATCTGCGGCGTTTTTATTGGTTTATGTTGTTGATGTTTTACTTA
GGGCGCACACCTAACGTATG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MNLKISTRIVVGICLLLLAMMSFIMLLVLSEFSSQVKESEQRELHKLYETAVANIASSGKLAQAMATIVSLTPEIQSNFA
ERDRPALKDRTLPLFAKLKQDFDIQQFQFHTPLATSFLRLHRPEKFGDDLTAIRKTIVETNTTKQPLNGLEYGVEGLGIR
GLVPMGYQGQHTGSVEFGMSFGQPFFDSFKDAYQAEIALLLPNGADFKAFGATFTPDIQAISELNSVMQGNEVIRTISLE
GKTFALYRHAIKDYSGQVFGVLDIAMDRSHSEQVMADIRLKLILIGFAAMLIGTAIAWFIAKGITRPIAETTQAMNDIAE
GEGDLTRRITITSKDEIAELAQAFNRFVEKIHHTVTQVSDATSLLATSAEEMSGITHETQSMANRQNLETEQVATAMNEM
AATVQEVAHNATDAADAANHANESTEQGKLVVQKVVATIAVLAEEIAAAANAINELERNTAEIDSVLVVIRNITEQTNLL
ALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTTEIQKMIEALQLKAKSTVSAMETSSRTTQSCVAQVNQAGEELVA
ITQAVSTISQMNIQIASAANEQCAVSAEINKNINNINDIATTTTNSAVHTARAGDELAQLAARLQVLLAQFRI

Sequences:

>Translated_633_residues
MNLKISTRIVVGICLLLLAMMSFIMLLVLSEFSSQVKESEQRELHKLYETAVANIASSGKLAQAMATIVSLTPEIQSNFA
ERDRPALKDRTLPLFAKLKQDFDIQQFQFHTPLATSFLRLHRPEKFGDDLTAIRKTIVETNTTKQPLNGLEYGVEGLGIR
GLVPMGYQGQHTGSVEFGMSFGQPFFDSFKDAYQAEIALLLPNGADFKAFGATFTPDIQAISELNSVMQGNEVIRTISLE
GKTFALYRHAIKDYSGQVFGVLDIAMDRSHSEQVMADIRLKLILIGFAAMLIGTAIAWFIAKGITRPIAETTQAMNDIAE
GEGDLTRRITITSKDEIAELAQAFNRFVEKIHHTVTQVSDATSLLATSAEEMSGITHETQSMANRQNLETEQVATAMNEM
AATVQEVAHNATDAADAANHANESTEQGKLVVQKVVATIAVLAEEIAAAANAINELERNTAEIDSVLVVIRNITEQTNLL
ALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTTEIQKMIEALQLKAKSTVSAMETSSRTTQSCVAQVNQAGEELVA
ITQAVSTISQMNIQIASAANEQCAVSAEINKNINNINDIATTTTNSAVHTARAGDELAQLAARLQVLLAQFRI
>Mature_633_residues
MNLKISTRIVVGICLLLLAMMSFIMLLVLSEFSSQVKESEQRELHKLYETAVANIASSGKLAQAMATIVSLTPEIQSNFA
ERDRPALKDRTLPLFAKLKQDFDIQQFQFHTPLATSFLRLHRPEKFGDDLTAIRKTIVETNTTKQPLNGLEYGVEGLGIR
GLVPMGYQGQHTGSVEFGMSFGQPFFDSFKDAYQAEIALLLPNGADFKAFGATFTPDIQAISELNSVMQGNEVIRTISLE
GKTFALYRHAIKDYSGQVFGVLDIAMDRSHSEQVMADIRLKLILIGFAAMLIGTAIAWFIAKGITRPIAETTQAMNDIAE
GEGDLTRRITITSKDEIAELAQAFNRFVEKIHHTVTQVSDATSLLATSAEEMSGITHETQSMANRQNLETEQVATAMNEM
AATVQEVAHNATDAADAANHANESTEQGKLVVQKVVATIAVLAEEIAAAANAINELERNTAEIDSVLVVIRNITEQTNLL
ALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTTEIQKMIEALQLKAKSTVSAMETSSRTTQSCVAQVNQAGEELVA
ITQAVSTISQMNIQIASAANEQCAVSAEINKNINNINDIATTTTNSAVHTARAGDELAQLAARLQVLLAQFRI

Specific function: May form a pore through which the hemolysin can be exported [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=287, Percent_Identity=33.4494773519164, Blast_Score=132, Evalue=7e-32,
Organism=Escherichia coli, GI2367378, Length=304, Percent_Identity=31.9078947368421, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1787690, Length=354, Percent_Identity=29.6610169491525, Blast_Score=122, Evalue=9e-29,
Organism=Escherichia coli, GI1788194, Length=359, Percent_Identity=28.9693593314763, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789453, Length=340, Percent_Identity=27.6470588235294, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 68649; Mature: 68649

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKISTRIVVGICLLLLAMMSFIMLLVLSEFSSQVKESEQRELHKLYETAVANIASSGK
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LAQAMATIVSLTPEIQSNFAERDRPALKDRTLPLFAKLKQDFDIQQFQFHTPLATSFLRL
HHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCHHHHEECCHHHHHHHHH
HRPEKFGDDLTAIRKTIVETNTTKQPLNGLEYGVEGLGIRGLVPMGYQGQHTGSVEFGMS
HCCHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGQPFFDSFKDAYQAEIALLLPNGADFKAFGATFTPDIQAISELNSVMQGNEVIRTISLE
CCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEECC
GKTFALYRHAIKDYSGQVFGVLDIAMDRSHSEQVMADIRLKLILIGFAAMLIGTAIAWFI
CCHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKGITRPIAETTQAMNDIAEGEGDLTRRITITSKDEIAELAQAFNRFVEKIHHTVTQVSD
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATSLLATSAEEMSGITHETQSMANRQNLETEQVATAMNEMAATVQEVAHNATDAADAANH
HHHHHHHCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
ANESTEQGKLVVQKVVATIAVLAEEIAAAANAINELERNTAEIDSVLVVIRNITEQTNLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
ALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTTEIQKMIEALQLKAKSTVSAMETS
EHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SRTTQSCVAQVNQAGEELVAITQAVSTISQMNIQIASAANEQCAVSAEINKNINNINDIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEHHHHCCCCCHHHHH
TTTTNSAVHTARAGDELAQLAARLQVLLAQFRI
CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLKISTRIVVGICLLLLAMMSFIMLLVLSEFSSQVKESEQRELHKLYETAVANIASSGK
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LAQAMATIVSLTPEIQSNFAERDRPALKDRTLPLFAKLKQDFDIQQFQFHTPLATSFLRL
HHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCHHHHEECCHHHHHHHHH
HRPEKFGDDLTAIRKTIVETNTTKQPLNGLEYGVEGLGIRGLVPMGYQGQHTGSVEFGMS
HCCHHCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGQPFFDSFKDAYQAEIALLLPNGADFKAFGATFTPDIQAISELNSVMQGNEVIRTISLE
CCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEECC
GKTFALYRHAIKDYSGQVFGVLDIAMDRSHSEQVMADIRLKLILIGFAAMLIGTAIAWFI
CCHHHHHHHHHHHCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKGITRPIAETTQAMNDIAEGEGDLTRRITITSKDEIAELAQAFNRFVEKIHHTVTQVSD
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATSLLATSAEEMSGITHETQSMANRQNLETEQVATAMNEMAATVQEVAHNATDAADAANH
HHHHHHHCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
ANESTEQGKLVVQKVVATIAVLAEEIAAAANAINELERNTAEIDSVLVVIRNITEQTNLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
ALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTTEIQKMIEALQLKAKSTVSAMETS
EHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SRTTQSCVAQVNQAGEELVAITQAVSTISQMNIQIASAANEQCAVSAEINKNINNINDIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEHHHHCCCCCHHHHH
TTTTNSAVHTARAGDELAQLAARLQVLLAQFRI
CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2162464; 10952301 [H]