| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is purC [H]
Identifier: 160873673
GI number: 160873673
Start: 639061
End: 640164
Strand: Reverse
Name: purC [H]
Synonym: Sbal195_0551
Alternate gene names: 160873673
Gene position: 640164-639061 (Counterclockwise)
Preceding gene: 160873674
Following gene: 160873672
Centisome position: 11.97
GC content: 50.18
Gene sequence:
>1104_bases ATGAGTCTTGCTGATTCCGTACTTGCCATCAATAACGATTTACCTATCCGCACCGACAGCCCAGTCCACAGCGGCAAGGT TCGCAGCGTTTACTGGCTAACCGATGCCGACAGTCGCCGTTTAATTACCACTAAAGGTTATAACGTCCCCGAAGATACCC CGCTCGCCATCATGGTGATCAGCGACCGTATCTCGGCCTTCGACTGTATCTTCCACGGTGAAGGCGGCCTCAAAGGCATT CCCGGTAAAGGCGCGGCATTAAACGCGATTTCAAACCATTGGTTTAAACTGTTCGCCGAAAACGGCCTAGCCGACAGCCA TATTTTGGATATCCCGCACCCGTTCGTATGGATAGTCCAAAAAGCCCGCCCTATTAAAGTCGAAGCCATTTGCCGTCAGT ACATCACAGGCTCAATGTGGCGCGCTTACTCAAAAGGCGAGCGAGTATTCTGTGGCATCACACTGCCAGAAGGCTTAGAG AAAGATCAAAAACTACCTGAGCTATTAATCACTCCATCGACTAAGGGTATTTTAACCGGCATCCCAGGCGTGCCCGCCCA AGATGACGTGAACATCAGCCGCAGCGACATCGAAGCCAACTACCAAGCTTTTGGTTTTGAACAGCTTGCAGATATCGACC TGTACGAGAAGCTGTTAAAAGATGGCTTTAAAGTGATTTCAGCCGCGCTGGCAAAACTTGACCAAGTGTTTGTCGACACT AAATTTGAGTTCGGTTATGTCACCGACAAAGACGGCAACTCAAAACTGATTTATATGGATGAAGTCGGCACCCCAGACTC ATCACGTATTTGGGACGGCGCCGCCTACCGCGATGGCAAGATTTTGGAAAACTCCAAAGAGGGCTTCCGCCAGTTCTTGC TGAATCATTTCCCCGATCCTGATGTGCTGCTCAATAAAGACAGAATGCCAGAGCGTGAAGCCCTAGCCCGCGATAATGAC CTGCCACTTGAGGCCATGATGCAAGTGTCACGCACTTACACCGGCGTTGCCGAGAAAGTGACTGGCGCTCCAATCCCGCT GCCAGCGAATCCTAAGGCAGATATCATCAAGATCCTACGGGAAGAGTATGATCTGATTGTTTAA
Upstream 100 bases:
>100_bases GTTGCAATAAATCTGGCTGTTGCTAACGCCATAGTCCATCTGCAAACCGACACTTATAAAAACCTTATCCCTACACTCTC TATCCTAAGGAATACTCGTC
Downstream 100 bases:
>100_bases TCAAATCATAGTGGGATGAGGAGTTTTCCCTTTCCCCTAGAGTAGAAAGGCGCTTAGGCGCCTTTTTGTTTTTCAAACTT GGGTTTGGATTTATTTGTAT
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVISDRISAFDCIFHGEGGLKGI PGKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQKARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLE KDQKLPELLITPSTKGILTGIPGVPAQDDVNISRSDIEANYQAFGFEQLADIDLYEKLLKDGFKVISAALAKLDQVFVDT KFEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDPDVLLNKDRMPEREALARDND LPLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILREEYDLIV
Sequences:
>Translated_367_residues MSLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVISDRISAFDCIFHGEGGLKGI PGKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQKARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLE KDQKLPELLITPSTKGILTGIPGVPAQDDVNISRSDIEANYQAFGFEQLADIDLYEKLLKDGFKVISAALAKLDQVFVDT KFEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDPDVLLNKDRMPEREALARDND LPLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILREEYDLIV >Mature_366_residues SLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVISDRISAFDCIFHGEGGLKGIP GKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQKARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLEK DQKLPELLITPSTKGILTGIPGVPAQDDVNISRSDIEANYQAFGFEQLADIDLYEKLLKDGFKVISAALAKLDQVFVDTK FEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDPDVLLNKDRMPEREALARDNDL PLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILREEYDLIV
Specific function: Unknown
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=298, Percent_Identity=32.2147651006711, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR014106 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 40812; Mature: 40681
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS01057 SAICAR_SYNTHETASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVI CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEE SDRISAFDCIFHGEGGLKGIPGKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQ CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEE KARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLEKDQKLPELLITPSTKGILTG CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCCEEECCCCCCEEEC IPGVPAQDDVNISRSDIEANYQAFGFEQLADIDLYEKLLKDGFKVISAALAKLDQVFVDT CCCCCCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KFEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDP CEEECEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC DVLLNKDRMPEREALARDNDLPLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILR CEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH EEYDLIV HHHHCCC >Mature Secondary Structure SLADSVLAINNDLPIRTDSPVHSGKVRSVYWLTDADSRRLITTKGYNVPEDTPLAIMVI CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEE SDRISAFDCIFHGEGGLKGIPGKGAALNAISNHWFKLFAENGLADSHILDIPHPFVWIVQ CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEE KARPIKVEAICRQYITGSMWRAYSKGERVFCGITLPEGLEKDQKLPELLITPSTKGILTG CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCCEEECCCCCCEEEC IPGVPAQDDVNISRSDIEANYQAFGFEQLADIDLYEKLLKDGFKVISAALAKLDQVFVDT CCCCCCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KFEFGYVTDKDGNSKLIYMDEVGTPDSSRIWDGAAYRDGKILENSKEGFRQFLLNHFPDP CEEECEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC DVLLNKDRMPEREALARDNDLPLEAMMQVSRTYTGVAEKVTGAPIPLPANPKADIIKILR CEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH EEYDLIV HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA